{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA437204\" and tax_phylum = \"Fibrobacterota\"", "rows": [[5536170, "PRJNA437204_P_NODE_35105_length_338_cov_4.301887_g34806_i0", "PRJNA437204", "35105", "338", "4.301887", "14.54037806", "Fibrobacter succinogenes", "833", "Bacteria", "Bacteria", "265", "3.7599999999999995e-66", "", "NTclustered", "gi|261370870|gb|CP001792.1|", "59374", "g34806", "i0", "82.133", "26.1775147928994", "347", "27", "100", "11", "1", "338", "753675", "753355", "Fibrobacter succinogenes subsp. succinogenes S85, complete genome", "blastn", "8848", "265", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Fibrobacteria", "Fibrobacterales", "Fibrobacteraceae", "Fibrobacter", "Fibrobacter succinogenes"], [5537079, "PRJNA437204_P_NODE_82485_length_251_cov_0.865169_g82186_i0", "PRJNA437204", "82485", "251", "0.865169", "2.17157419", "Fibrobacter succinogenes", "833", "Bacteria", "Bacteria", "193", "1.28e-44", "", "NTclustered", "gi|261370870|gb|CP001792.1|", "59374", "g82186", "i0", "81.739", "1.83266932270916", "230", "42", "92", "0", "20", "249", "3663843", "3663614", "Fibrobacter succinogenes subsp. succinogenes S85, complete genome", "blastn", "460", "193", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Fibrobacteria", "Fibrobacterales", "Fibrobacteraceae", "Fibrobacter", "Fibrobacter succinogenes"], [5537409, "PRJNA437204_P_NODE_99945_length_247_cov_0.885057_g99646_i0", "PRJNA437204", "99945", "247", "0.885057", "2.18609079", "Fibrobacter succinogenes", "833", "Bacteria", "Bacteria", "261", "3.41e-65", "", "NTclustered", "gi|261370870|gb|CP001792.1|", "59374", "g99646", "i0", "86.555", "1.92712550607287", "238", "30", "96", "2", "11", "247", "407879", "408115", "Fibrobacter succinogenes subsp. succinogenes S85, complete genome", "blastn", "476", "261", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Fibrobacteria", "Fibrobacterales", "Fibrobacteraceae", "Fibrobacter", "Fibrobacter succinogenes"], [6810039, "PRJNA437204_P_NODE_27886_length_365_cov_5.208904_g27587_i0", "PRJNA437204", "27886", "365", "5.208904", "19.0124996", "Fibrobacter succinogenes", "833", "Bacteria", "Bacteria", "368", "3.03e-97", "", "NTclustered", "gi|261370870|gb|CP001792.1|", "59374", "g27587", "i0", "85.714", "24.372602739726", "371", "28", "99", "12", "1", "362", "753355", "753709", "Fibrobacter succinogenes subsp. succinogenes S85, complete genome", "blastn", "8896", "368", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Fibrobacteria", "Fibrobacterales", "Fibrobacteraceae", "Fibrobacter", "Fibrobacter succinogenes"], [17010628, "PRJNA437204_P_NODE_83474_length_250_cov_2.875706_g83175_i0", "PRJNA437204", "83474", "250", "2.875706", "7.189265", "Fibrobacter succinogenes", "833", "Bacteria", "Bacteria", "207", "4.57e-49", "", "NTclustered", "gi|261370870|gb|CP001792.1|", "59374", "g83175", "i0", "84.545", "35.684", "220", "22", "88", "5", "23", "242", "753587", "753380", "Fibrobacter succinogenes subsp. succinogenes S85, complete genome", "blastn", "8921", "207", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Fibrobacteria", "Fibrobacterales", "Fibrobacteraceae", "Fibrobacter", "Fibrobacter succinogenes"], [19558660, "PRJNA437204_P_NODE_49956_length_300_cov_3.180617_g49657_i0", "PRJNA437204", "49956", "300", "3.180617", "9.541851", "Fibrobacter succinogenes", "833", "Bacteria", "Bacteria", "427", "3.97e-115", "", "NTclustered", "gi|559133573|tpe|HG788729.1|", "59374", "g49657", "i0", "92.409", "4.93333333333333", "303", "18", "100", "5", "1", "300", "7", "307", "TPA: Fibrobacter succinogenes subsp. succinogenes S85 transfer-messenger mRNA Fibro_succi_S85, single chain mature transcript", "blastn", "1480", "427", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Fibrobacteria", "Fibrobacterales", "Fibrobacteraceae", "Fibrobacter", "Fibrobacter succinogenes"], [23385597, "PRJNA437204_P_NODE_84779_length_250_cov_0.870056_g84480_i0", "PRJNA437204", "84779", "250", "0.870056", "2.17514", "Fibrobacter succinogenes", "833", "Bacteria", "Bacteria", "318", "2.02e-82", "", "NTclustered", "gi|261370870|gb|CP001792.1|", "59374", "g84480", "i0", "89.6", "2", "250", "26", "100", "0", "1", "250", "3678339", "3678588", "Fibrobacter succinogenes subsp. succinogenes S85, complete genome", "blastn", "500", "318", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Fibrobacteria", "Fibrobacterales", "Fibrobacteraceae", "Fibrobacter", "Fibrobacter succinogenes"], [27138685, "PRJNA437204_P_NODE_104942_length_246_cov_0.890173_g104643_i0", "PRJNA437204", "104942", "246", "0.890173", "2.18982558", "Fibrobacter sp. UWR2", "1964352", "Bacteria", "Bacteria", "171", "3.7e-51", "", "NR", "WP_088636820.1", "1964352", "g104643", "i0", "100", "1", "82", "0", "100", "0", "1", "246", "96", "177", "WP_088636820.1 TIGR02147 family protein [Fibrobacter sp. UWR2]", "diamond", "246", "171", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Fibrobacteria", "Fibrobacterales", "Fibrobacteraceae", "Fibrobacter", "Fibrobacter sp. UWR2"], [27202100, "PRJNA437204_P_NODE_103382_length_246_cov_0.890173_g103083_i0", "PRJNA437204", "103382", "246", "0.890173", "2.18982558", "Fibrobacter sp. UWT2", "1896224", "Bacteria", "Bacteria", "167", "4.8999999999999996e-48", "", "NR", "WP_072797043.1", "1896224", "g103083", "i0", "100", "10", "82", "0", "100", "0", "246", "1", "260", "341", "WP_072797043.1 hemolysin family protein [Fibrobacter sp. UWT2]", "diamond", "2460", "167", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Fibrobacteria", "Fibrobacterales", "Fibrobacteraceae", "Fibrobacter", "Fibrobacter sp. UWT2"], [27833921, "PRJNA437204_P_NODE_80764_length_251_cov_0.865169_g80465_i0", "PRJNA437204", "80764", "251", "0.865169", "2.17157419", "Fibrobacter sp. UWH4", "1896210", "Bacteria", "Bacteria", "147", "1.25e-41", "", "NR", "WP_072978995.1", "1896210", "g80465", "i0", "89.2", "0.99203187250996006", "83", "9", "99.2", "0", "251", "3", "11", "93", "WP_072978995.1 M23 family metallopeptidase [Fibrobacter sp. UWH4]", "diamond", "249", "147", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Fibrobacteria", "Fibrobacterales", "Fibrobacteraceae", "Fibrobacter", "Fibrobacter sp. UWH4"], [28212606, "PRJNA437204_P_NODE_106006_length_246_cov_0.861272_g105707_i0", "PRJNA437204", "106006", "246", "0.861272", "2.11872912", "Fibrobacter sp.", "35828", "Bacteria", "Bacteria", "155", "4.93e-44", "", "NR", "MBR3669623.1", "35828", "g105707", "i0", "96.3", "1.97560975609756", "81", "3", "98.8", "0", "2", "244", "270", "350", "MBR3669623.1 Na/Pi cotransporter family protein [Fibrobacter sp.]", "diamond", "486", "155", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Fibrobacteria", "Fibrobacterales", "Fibrobacteraceae", "Fibrobacter", "Fibrobacter sp."], [28355464, "PRJNA437204_P_NODE_125566_length_241_cov_0.916667_g125267_i0", "PRJNA437204", "125566", "241", "0.916667", "2.20916747", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "90.5", "5.56e-19", "", "NR", "KMQ52423.1", "1008392", "g125267", "i0", "51.3", "3.95850622406639", "78", "38", "97.1", "0", "5", "238", "399", "476", "KMQ52423.1 signal peptidase [Chitinispirillum alkaliphilum]", "diamond", "954", "90.5", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Chitinispirillia", "Chitinispirillales", "Chitinispirillaceae", "Chitinispirillum", "Chitinispirillum alkaliphilum"], [28718136, "PRJNA437204_P_NODE_109627_length_245_cov_0.895349_g109328_i0", "PRJNA437204", "109627", "245", "0.895349", "2.19360505", "Fibrobacter sp. UWH4", "1896210", "Bacteria", "Bacteria", "164", "2.12e-45", "", "NR", "WP_254793838.1", "1896210", "g109328", "i0", "96.3", "1.98367346938776", "81", "3", "99.2", "0", "243", "1", "62", "142", "WP_254793838.1 tetratricopeptide repeat protein [Fibrobacter sp. UWH4]", "diamond", "486", "164", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Fibrobacteria", "Fibrobacterales", "Fibrobacteraceae", "Fibrobacter", "Fibrobacter sp. UWH4"], [29633289, "PRJNA437204_P_NODE_112810_length_244_cov_0.900585_g112511_i0", "PRJNA437204", "112810", "244", "0.900585", "2.1974274", "Fibrobacter sp.", "35828", "Bacteria", "Bacteria", "67", "1.01e-10", "", "NR", "WP_290993461.1", "35828", "g112511", "i0", "96.8", "0.762295081967213", "31", "1", "38.1", "0", "3", "95", "474", "504", "WP_290993461.1 HD-GYP domain-containing protein [Fibrobacter sp.]", "diamond", "186", "67", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Fibrobacteria", "Fibrobacterales", "Fibrobacteraceae", "Fibrobacter", "Fibrobacter sp."], [29854832, "PRJNA437204_P_NODE_91751_length_249_cov_0.875000_g91452_i0", "PRJNA437204", "91751", "249", "0.875", "2.17875", "uncultured Fibrobacter sp.", "261512", "Bacteria", "Bacteria", "172", "8.41e-49", "", "NR", "WP_297700320.1", "261512", "g91452", "i0", "95.1", "1.97590361445783", "82", "4", "98.8", "0", "2", "247", "44", "125", "WP_297700320.1 ABC transporter substrate-binding protein [uncultured Fibrobacter sp.]", "diamond", "492", "172", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Fibrobacteria", "Fibrobacterales", "Fibrobacteraceae", "Fibrobacter", "uncultured Fibrobacter sp."], [31261398, "PRJNA437204_P_NODE_87955_length_250_cov_0.864407_g87656_i0", "PRJNA437204", "87955", "250", "0.864407", "2.1610175", "FCB group", "1783270", "Bacteria", "Bacteria", "156", "5.7199999999999986e-43", "", "NR", "WP_163438601.1", "833", "g87656", "i0", "97.6", "1.992", "83", "2", "99.6", "0", "250", "2", "4", "86", "WP_163438601.1 L-lactate permease [Fibrobacter succinogenes]", "diamond", "498", "156", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Fibrobacteria", "Fibrobacterales", "Fibrobacteraceae", "Fibrobacter", "Fibrobacter succinogenes"]], "truncated": false, "filtered_table_rows_count": 16, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_phylum\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA437204", "p1": "Fibrobacterota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA437204&tax_phylum=Fibrobacterota", "results": [{"value": "PRJNA437204", "label": "PRJNA437204", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_phylum=Fibrobacterota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA437204&tax_phylum=Fibrobacterota", "results": [{"value": "diamond", "label": "diamond", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA437204&tax_phylum=Fibrobacterota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA437204&tax_phylum=Fibrobacterota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA437204&tax_phylum=Fibrobacterota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA437204&tax_phylum=Fibrobacterota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA437204&tax_phylum=Fibrobacterota", "results": [{"value": "FCB group", "label": "FCB group", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA437204&tax_phylum=Fibrobacterota&tax_clade=FCB+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA437204&tax_phylum=Fibrobacterota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA437204&tax_phylum=Fibrobacterota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA437204&tax_phylum=Fibrobacterota", "results": [{"value": "Fibrobacterota", "label": "Fibrobacterota", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA437204", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 211.45189800154185}