{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA429937\", tax_clade = \"Sar\" and tax_phylum = \"Ciliophora\"", "rows": [[1702328, "PRJNA429937_P_NODE_81622_length_360_cov_7.607251_g59182_i0", "PRJNA429937", "81622", "360", "7.607251", "27.3861036", "Kentrophoros sp. 1 BS-2022", "2930470", "SAR_Eukaryotes", "SAR_Eukaryotes", "52.8", "0.034", "", "NTclustered", "gi|2261268989|emb|OX095830.1|", "2930470", "g59182", "i0", "100", "0.0777777777777778", "28", "0", "8", "0", "333", "360", "39", "12", "Kentrophoros sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863266, clone N10:18S_rRNA::TRINITY_DN246_c0_g1_i2:46-1672(+)", "blastn", "28", "52.8", "1", "Eukaryota", "Sar", null, "Ciliophora", "Karyorelictea", "Protostomatida", "Kentrophoridae", "Kentrophoros", "Kentrophoros sp. 1 BS-2022"], [2977800, "PRJNA429937_P_NODE_61143_length_441_cov_22.621359_g41230_i0", "PRJNA429937", "61143", "441", "22.621359000000002", 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"3869", "Colpoda sp. isolate JGP15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence", "blastn", "162", "93.5", "1", "Eukaryota", "Sar", null, "Ciliophora", "Colpodea", "Colpodida", "Colpodidae", "Colpoda", "Colpoda sp."], [4915881, "PRJNA429937_P_NODE_82564_length_357_cov_213.960366_g60091_i0", "PRJNA429937", "82564", "357", "213.960366", "763.83850662", "root", "1", "Root_unresolved", "Root_unresolved", "494", "4.67e-135", "", "NTclustered", "gi|345541658|gb|JN547815.1|", "5911", "g60091", "i0", "93.433", "82.375350140056", "335", "19", "94", "3", "24", "357", "2193", "2525", "Tetrahymena thermophila strain ATCC 30382 18S ribosomal RNA gene, partial sequence; and internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 26S ribosomal RNA gene, complete sequence", "blastn", "29408", 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gene, partial sequence", "blastn", "12350", "200", "1", "Eukaryota", "Sar", null, "Ciliophora", "Colpodea", "Colpodida", "Colpodidae", "Colpoda", "Colpoda inflata"], [10629640, "PRJNA429937_P_NODE_122309_length_242_cov_2861.915493_g99683_i0", "PRJNA429937", "122309", "242", "2861.915493", "6925.83549306", "Tetrahymena pyriformis", "5908", "SAR_Eukaryotes", "SAR_Eukaryotes", "379", "8.800000000000001e-101", "", "NTclustered", "gi|1241841574|gb|KY273139.1|", "5908", "g99683", "i0", "96.137", "53.6570247933884", "233", "7", "96", "2", "10", "242", "233", "3", "Tetrahymena pyriformis isolate 1098-1 large subunit ribosomal RNA gene, partial sequence; macronuclear", "blastn", "12985", "379", "1", "Eukaryota", "Sar", null, "Ciliophora", "Oligohymenophorea", "Hymenostomatida", "Tetrahymenidae", "Tetrahymena", "Tetrahymena pyriformis"], [11905696, "PRJNA429937_P_NODE_52290_length_487_cov_3258.561135_g34430_i0", "PRJNA429937", "52290", "487", "3258.561135", "15869.19272745", "Euplotes aediculatus", "5940", "SAR_Eukaryotes", "SAR_Eukaryotes", "507", "8.43e-139", "", "NTclustered", "gi|6980030|gb|AF223571.1|AF223571", "5940", "g34430", "i0", "86.279", "34.6611909650924", "481", "48", "98", "13", "1", "477", "2296", "2762", "Euplotes aediculatus internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence", "blastn", "16880", "507", "1", "Eukaryota", "Sar", null, "Ciliophora", "Spirotrichea", "Euplotida", "Euplotidae", "Euplotes", "Euplotes aediculatus"], [12566554, "PRJNA429937_P_NODE_76050_length_379_cov_1104.205714_g53891_i0", "PRJNA429937", "76050", "379", "1104.205714", "4184.93965606", "Eukaryota", "2759", "SAR_Eukaryotes", "SAR_Eukaryotes", "577", "4.8199999999999996e-160", "", "NTclustered", "gi|220966760|gb|FJ545743.1|", "94289", "g53891", "i0", "96.045", "92.8759894459103", "354", "14", "93", "0", "23", "376", "4016", "4369", "Sterkiella histriomuscorum 17S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence; macronuclear", "blastn", "35200", "577", "1", "Eukaryota", "Sar", null, "Ciliophora", "Spirotrichea", "Sporadotrichida", "Oxytrichidae", "Sterkiella", "Sterkiella histriomuscorum"], [14454634, "PRJNA429937_P_NODE_118232_length_253_cov_2.035714_g95606_i0", "PRJNA429937", "118232", "253", "2.035714", "5.15035642", "Tetrahymena paravorax", "5905", "SAR_Eukaryotes", "SAR_Eukaryotes", "200", "7.749999999999998e-47", "", "NTclustered", "gi|126142780|gb|EF070253.1|", "5905", "g95606", "i0", "100", "71.6166007905138", "108", "0", "43", "0", "146", "253", "149", "256", "Tetrahymena paravorax strain RP 18S small subunit ribosomal RNA gene, partial sequence", "blastn", "18119", "200", "1", "Eukaryota", "Sar", null, "Ciliophora", "Oligohymenophorea", "Hymenostomatida", "Tetrahymenidae", "Tetrahymena", "Tetrahymena paravorax"], [15115190, "PRJNA429937_P_NODE_151412_length_176_cov_6.782313_g128785_i0", "PRJNA429937", "151412", "176", "6.782313", "11.93687088", "Colpoda", "5979", "SAR_Eukaryotes", "SAR_Eukaryotes", "265", "1.7499999999999998e-66", "", "NTclustered", "gi|759083543|gb|KM222160.1|", "5980", "g128785", "i0", "94.318", "97.2443181818182", "176", "5", "100", "4", "1", "176", "1018", "848", "Colpoda inflata voucher SXK2011071402 large subunit ribosomal RNA gene, partial sequence", "blastn", "17115", "265", "1", "Eukaryota", "Sar", null, "Ciliophora", "Colpodea", "Colpodida", "Colpodidae", "Colpoda", "Colpoda inflata"], [15115588, "PRJNA429937_P_NODE_82152_length_359_cov_2.633333_g59693_i0", "PRJNA429937", "82152", "359", "2.633333", "9.45366547", "Tintinnida", "200604", "SAR_Eukaryotes", "SAR_Eukaryotes", "86.1", "3.35e-12", "", "NTclustered", "gi|759083534|gb|KM222151.1|", "1607860", "g59693", "i0", "89.552", "16.3788300835655", "67", "7", "19", "0", "1", "67", "1518", "1584", "Favella cf. campanula voucher JY08122201 large subunit ribosomal RNA gene, partial sequence", "blastn", "5880", "86.1", "1", "Eukaryota", "Sar", null, "Ciliophora", "Spirotrichea", "Tintinnida", "Xystonellidae", "Favella", "Favella cf. campanula"], [17664865, "PRJNA429937_P_NODE_122614_length_242_cov_1.929577_g99988_i0", "PRJNA429937", "122614", "242", "1.929577", "4.66957634", "Eukaryota", "2759", "SAR_Eukaryotes", "SAR_Eukaryotes", "167", "7.46e-37", "", "NTclustered", "gi|1802599793|gb|MT001202.1|", "41631", "g99988", "i0", "96.97", "49.9917355371901", "99", "3", "73", "0", "1", "99", "1215", "1313", "Colpoda sp. strain HFCC1281 small subunit ribosomal RNA gene, partial sequence", "blastn", "12098", "167", "1", "Eukaryota", "Sar", null, "Ciliophora", "Colpodea", "Colpodida", "Colpodidae", "Colpoda", "Colpoda sp."], [18278509, "PRJNA429937_P_NODE_50255_length_499_cov_11.355319_g32888_i0", "PRJNA429937", "50255", "499", "11.355319", "56.66304181", "Tetrahymena nigricans", "2704176", "SAR_Eukaryotes", "SAR_Eukaryotes", "431", "5.359999999999998e-116", "", "NTclustered", "gi|2082965251|gb|MZ827091.1|", "2704176", "g32888", "i0", "93.515", "65.128256513026", "293", "13", "86", "5", "185", "476", "789", "502", "Tetrahymena nigricans isolate VB57 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence", "blastn", "32499", "431", "1", "Eukaryota", "Sar", null, "Ciliophora", "Oligohymenophorea", "Hymenostomatida", "Tetrahymenidae", "Tetrahymena", "Tetrahymena nigricans"], [20214031, "PRJNA429937_P_NODE_94216_length_319_cov_18.368966_g71626_i0", "PRJNA429937", "94216", "319", "18.368966", "58.59700154", "Eukaryota", "2759", "SAR_Eukaryotes", "SAR_Eukaryotes", "525", "1.4699999999999994e-144", "", "NTclustered", "gi|1837628855|gb|MN158348.1|", "5909", "g71626", "i0", "98.976", "90.9341692789969", "293", "3", "92", "0", "4", "296", "2958", "2666", "Tetrahymena rostrata strain TRAUS 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence", "blastn", "29008", "525", "1", "Eukaryota", "Sar", null, "Ciliophora", "Oligohymenophorea", "Hymenostomatida", "Tetrahymenidae", "Tetrahymena", "Tetrahymena rostrata"], [21489056, "PRJNA429937_P_NODE_108897_length_277_cov_3.149194_g86276_i0", "PRJNA429937", "108897", "277", "3.149194", "8.72326738", "Tintinnida", "200604", "SAR_Eukaryotes", "SAR_Eukaryotes", "86.1", "2.51e-12", "", "NTclustered", "gi|759083534|gb|KM222151.1|", "1607860", "g86276", "i0", "89.552", "21.2274368231047", "67", "7", "24", "0", "1", "67", "1518", "1584", "Favella cf. campanula voucher JY08122201 large subunit ribosomal RNA gene, partial sequence", "blastn", "5880", "86.1", "1", "Eukaryota", "Sar", null, "Ciliophora", "Spirotrichea", "Tintinnida", "Xystonellidae", "Favella", "Favella cf. campanula"], [24653340, "PRJNA429937_P_NODE_59300_length_450_cov_7.370546_g39786_i0", "PRJNA429937", "59300", "450", "7.370546", "33.167457", "Halteria grandinella", "5974", "SAR_Eukaryotes", "SAR_Eukaryotes", "63.2", "2.67e-8", "", "NR", "TNV87182.1", "5974", "g39786", "i0", "43.7", "0.686666666666667", "103", "38", "55.3", "2", "102", "350", "855", "957", "TNV87182.1 hypothetical protein FGO68_gene9481 [Halteria grandinella]", "diamond", "309", "63.2", "1", "Eukaryota", "Sar", null, "Ciliophora", "Spirotrichea", "Sporadotrichida", "Halteriidae", "Halteria", "Halteria grandinella"], [24653539, "PRJNA429937_P_NODE_69880_length_403_cov_8.304813_g48365_i0", "PRJNA429937", "69880", "403", "8.304813", "33.46839639", "Trachelocercidae sp. 3 BS-2022", "2930473", "SAR_Eukaryotes", "SAR_Eukaryotes", "52.8", "0.039", "", "NTclustered", "gi|2261268975|emb|OX095823.1|", "2930473", "g48365", "i0", "100", "0.0694789081885856", "28", "0", "7", "0", "1", "28", "11", "38", "Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-)", "blastn", "28", "52.8", "1", "Eukaryota", "Sar", null, "Ciliophora", "Karyorelictea", "Protostomatida", "Trachelocercidae", null, "Trachelocercidae sp. 3 BS-2022"], [30739142, "PRJNA429937_P_NODE_140774_length_204_cov_2.262857_g118147_i0", "PRJNA429937", "140774", "204", "2.262857", "4.61622828", "Tetrahymena thermophila SB21", "5911", "SAR_Eukaryotes", "SAR_Eukaryotes", "87.4", "4.05e-18", "", "NR", "XP_001030873.3", "312017", "g118147", "i0", "85.4", "0.705882352941177", "48", "7", "70.6", "0", "36", "179", "1023", "1070", "XP_001030873.3 hypothetical protein TTHERM_01002750 [Tetrahymena thermophila SB210]", "diamond", "144", "87.4", "1", "Eukaryota", "Sar", null, "Ciliophora", "Oligohymenophorea", "Hymenostomatida", "Tetrahymenidae", "Tetrahymena", "Tetrahymena thermophila"]], "truncated": false, "filtered_table_rows_count": 20, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA429937", "p1": "Sar", "p2": "Ciliophora"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA429937&tax_clade=Sar&tax_phylum=Ciliophora", "results": [{"value": "PRJNA429937", "label": "PRJNA429937", "count": 20, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=Sar&tax_phylum=Ciliophora", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA429937&tax_clade=Sar&tax_phylum=Ciliophora", "results": [{"value": "blastn", "label": "blastn", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA429937&tax_clade=Sar&tax_phylum=Ciliophora&analysis=blastn", "selected": false}, {"value": "diamond", "label": "diamond", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA429937&tax_clade=Sar&tax_phylum=Ciliophora&analysis=diamond", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA429937&tax_clade=Sar&tax_phylum=Ciliophora", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 20, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA429937&tax_clade=Sar&tax_phylum=Ciliophora&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA429937&tax_clade=Sar&tax_phylum=Ciliophora", "results": [{"value": "Sar", "label": "Sar", "count": 20, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA429937&tax_phylum=Ciliophora", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA429937&tax_clade=Sar&tax_phylum=Ciliophora", "results": [], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA429937&tax_clade=Sar&tax_phylum=Ciliophora", "results": [{"value": "Ciliophora", "label": "Ciliophora", "count": 20, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA429937&tax_clade=Sar", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 258.84983399737393}