{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA408129\" and tax_superkingdom = \"Archaea\"", "rows": [[418381, "PRJNA408129_S_NODE_21041_length_176_cov_2.287770_g21023_i0", "PRJNA408129", "21041", "176", "2.28777", "4.0264752", "archaeon", "1906665", "Archaea", "Archaea", "61.2", "1.03e-9", "", "NR", "RYG67142.1", "1906665", "g21023", "i0", "80", "2.28409090909091", "35", "7", "59.7", "0", "2", "106", "140", "174", "RYG67142.1 MAG: hypothetical protein EON64_08125, partial [archaeon]", "diamond", "402", "61.2", "1", "Archaea", null, null, null, null, null, null, null, "archaeon"], [1693401, "PRJNA408129_S_NODE_8842_length_229_cov_10.020833_g8824_i0", "PRJNA408129", "8842", "229", "10.020833", "22.94770757", "Methanosarcina barkeri", "2208", "Archaea", "Archaea", "54.7", "0.006", "", "NTclustered", "gi|805384997|gb|CP009517.1|", "1434107", "g8824", "i0", "96.97", "0.14410480349345", "33", "0", "14", "1", "178", "209", "2441374", "2441342", "Methanosarcina barkeri 3, complete genome", "blastn", "33", "54.7", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Methanomicrobia", "Methanosarcinales", "Methanosarcinaceae", "Methanosarcina", "Methanosarcina barkeri"], [26663720, "PRJNA408129_S_NODE_20221_length_178_cov_3.439716_g20203_i0", "PRJNA408129", "20221", "178", "3.439716", "6.12269448", "Nitrososphaeraceae archaeon", "2169593", "Archaea", "Archaea", "71.2", "1.1e-13", "", "NR", "MDW0290255.1", "2169593", "g20203", "i0", "64", "0.842696629213483", "50", "18", "84.3", "0", "152", "3", "30", "79", "MDW0290255.1 hypothetical protein [Nitrososphaeraceae archaeon]", "diamond", "150", "71.2", "1", "Archaea", null, "Thermoproteati", "Nitrososphaerota", "Nitrososphaeria", "Nitrososphaerales", "Nitrososphaeraceae", null, "Nitrososphaeraceae archaeon"], [27012200, "PRJNA408129_S_NODE_28082_length_161_cov_3.556452_g28064_i0", "PRJNA408129", "28082", "161", "3.556452", "5.72588772", "Nitrososphaeraceae archaeon", "2169593", "Archaea", "Archaea", "98.6", "1.05e-22", "", "NR", "HEY6588048.1", "2169593", "g28064", "i0", "100", "3.27950310559006", "44", "0", "82", "0", "29", "160", "133", "176", "HEY6588048.1 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase [Nitrososphaeraceae archaeon]", "diamond", "528", "98.6", "1", "Archaea", null, "Thermoproteati", "Nitrososphaerota", "Nitrososphaeria", "Nitrososphaerales", "Nitrososphaeraceae", null, "Nitrososphaeraceae archaeon"], [27517929, "PRJNA408129_S_NODE_11663_length_212_cov_1.857143_g11645_i0", "PRJNA408129", "11663", "212", "1.857143", "3.93714316", "Nitrososphaeraceae archaeon", "2169593", "Archaea", "Archaea", "43.1", "0.0107", "", "NR", "MDW0290255.1", "2169593", "g11645", "i0", "47.5", "0.566037735849057", "40", "20", "56.6", "1", "66", "185", "101", "139", "MDW0290255.1 hypothetical protein [Nitrososphaeraceae archaeon]", "diamond", "120", "43.1", "1", "Archaea", null, "Thermoproteati", "Nitrososphaerota", "Nitrososphaeria", "Nitrososphaerales", "Nitrososphaeraceae", null, "Nitrososphaeraceae archaeon"], [27580981, "PRJNA408129_S_NODE_7524_length_240_cov_2.014778_g7506_i0", "PRJNA408129", "7524", "240", "2.014778", "4.8354672", "Nitrososphaeraceae archaeon", "2169593", "Archaea", "Archaea", "51.6", "9.34e-6", "", "NR", "MDW0290255.1", "2169593", "g7506", "i0", "43.5", "0.775", "62", "35", "77.5", "0", "6", "191", "98", "159", "MDW0290255.1 hypothetical protein [Nitrososphaeraceae archaeon]", "diamond", "186", "51.6", "1", "Archaea", null, "Thermoproteati", "Nitrososphaerota", "Nitrososphaeria", "Nitrososphaerales", "Nitrososphaeraceae", null, "Nitrososphaeraceae archaeon"], [27612769, "PRJNA408129_S_NODE_31404_length_156_cov_1.983193_g31386_i0", "PRJNA408129", "31404", "156", "1.983193", "3.09378108", "halophilic archaeon J", "29295", "Archaea", "Archaea", "77", "1.42e-15", "", "NR", "ERH12629.1", "1085029", "g31386", "i0", "88.1", "0.807692307692308", "42", "5", "80.8", "0", "3", "128", "175", "216", "ERH12629.1 MAG: K+ transport system, NAD-binding component [halophilic archaeon J07HB67]", "diamond", "126", "77", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Halobacteria", "Halobacteriales", null, null, "halophilic archaeon J07HB67"], [28166097, "PRJNA408129_S_NODE_24825_length_167_cov_3.584615_g24807_i0", "PRJNA408129", "24825", "167", "3.584615", "5.98630705", "Nitrososphaeria", "1643678", "Archaea", "Archaea", "105", "1.16e-24", "", "NR", "RPJ30093.1", "2026768", "g24807", "i0", "96.1", "1.83233532934132", "51", "2", "91.6", "0", "14", "166", "397", "447", "RPJ30093.1 MAG: lysine--tRNA ligase [Nitrosopumilales archaeon]", "diamond", "306", "106", "0.990566037735849", "Archaea", null, "Thermoproteati", "Nitrososphaerota", "Nitrososphaeria", "Nitrosopumilales", null, null, "Nitrosopumilales archaeon"], [28559982, "PRJNA408129_S_NODE_9567_length_224_cov_5.080214_g9549_i0", "PRJNA408129", "9567", "224", "5.080214", "11.37967936", "Nitrososphaeraceae archaeon", "2169593", "Archaea", "Archaea", "50.1", "5.17e-5", "", "NR", "MDW0290256.1", "2169593", "g9549", "i0", "55.6", "0.602678571428571", "45", "20", "60.3", "0", "163", "29", "131", "175", "MDW0290256.1 reverse transcriptase family protein [Nitrososphaeraceae archaeon]", "diamond", "135", "50.1", "1", "Archaea", null, "Thermoproteati", "Nitrososphaerota", "Nitrososphaeria", "Nitrososphaerales", "Nitrososphaeraceae", null, "Nitrososphaeraceae archaeon"], [28906926, "PRJNA408129_S_NODE_10468_length_219_cov_1.241758_g10450_i0", "PRJNA408129", "10468", "219", "1.241758", "2.71945002", "Nitrososphaeraceae archaeon", "2169593", "Archaea", "Archaea", "58.9", "1.14e-8", "", "NR", "MDW0290255.1", "2169593", "g10450", "i0", "75.8", "0.452054794520548", "33", "8", "45.2", "0", "112", "14", "12", "44", "MDW0290255.1 hypothetical protein [Nitrososphaeraceae archaeon]", "diamond", "99", "58.9", "1", "Archaea", null, "Thermoproteati", "Nitrososphaerota", "Nitrososphaeria", "Nitrososphaerales", "Nitrososphaeraceae", null, "Nitrososphaeraceae archaeon"], [29159967, "PRJNA408129_S_NODE_13269_length_203_cov_3.746988_g13251_i0", "PRJNA408129", "13269", "203", "3.746988", "7.60638564", "Nitrososphaeraceae archaeon", "2169593", "Archaea", "Archaea", "93.6", "2.91e-22", "", "NR", "HJS64018.1", "2169593", "g13251", "i0", "85.4", "0.70935960591133", "48", "7", "70.9", "0", "154", "11", "1", "48", "HJS64018.1 hypothetical protein [Nitrososphaeraceae archaeon]", "diamond", "144", "93.6", "1", "Archaea", null, "Thermoproteati", "Nitrososphaerota", "Nitrososphaeria", "Nitrososphaerales", "Nitrososphaeraceae", null, "Nitrososphaeraceae archaeon"], [29159974, "PRJNA408129_S_NODE_24849_length_167_cov_3.300000_g24831_i0", "PRJNA408129", "24849", "167", "3.3", "5.511", "Nitrososphaeraceae archaeon", "2169593", "Archaea", "Archaea", "45.1", "0.00113", "", "NR", "MDW0290255.1", "2169593", "g24831", "i0", "56.8", "0.664670658682635", "37", "16", "66.5", "0", "40", "150", "67", "103", "MDW0290255.1 hypothetical protein [Nitrososphaeraceae archaeon]", "diamond", "111", "45.1", "1", "Archaea", null, "Thermoproteati", "Nitrososphaerota", "Nitrososphaeria", "Nitrososphaerales", "Nitrososphaeraceae", null, "Nitrososphaeraceae archaeon"], [29696108, "PRJNA408129_S_NODE_10950_length_216_cov_2.128492_g10932_i0", "PRJNA408129", "10950", "216", "2.128492", "4.59754272", "Nitrososphaeraceae archaeon", "2169593", "Archaea", "Archaea", "124", "3.859999999999999e-31", "", "NR", "MDR4512716.1", "2169593", "g10932", "i0", "81.9", "1", "72", "13", "100", "0", "1", "216", "779", "850", "MDR4512716.1 type I restriction endonuclease subunit R [Nitrososphaeraceae archaeon]", "diamond", "216", "124", "1", "Archaea", null, "Thermoproteati", "Nitrososphaerota", "Nitrososphaeria", "Nitrososphaerales", "Nitrososphaeraceae", null, "Nitrososphaeraceae archaeon"], [32793434, "PRJNA408129_S_NODE_32880_length_154_cov_2.025641_g32862_i0", "PRJNA408129", "32880", "154", "2.025641", "3.11948714", "Nitrososphaeraceae archaeon", "2169593", "Archaea", "Archaea", "42.4", "0.0132", "", "NR", "MDW0290256.1", "2169593", "g32862", "i0", "73.1", "0.506493506493506", "26", "7", "50.6", "0", "75", "152", "77", "102", "MDW0290256.1 reverse transcriptase family protein [Nitrososphaeraceae archaeon]", "diamond", "78", "42.4", "1", "Archaea", null, "Thermoproteati", "Nitrososphaerota", "Nitrososphaeria", "Nitrososphaerales", "Nitrososphaeraceae", null, "Nitrososphaeraceae archaeon"]], "truncated": false, "filtered_table_rows_count": 14, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_superkingdom\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA408129", "p1": "Archaea"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA408129&tax_superkingdom=Archaea", "results": [{"value": "PRJNA408129", "label": "PRJNA408129", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_superkingdom=Archaea", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA408129&tax_superkingdom=Archaea", "results": [{"value": "diamond", "label": "diamond", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA408129&tax_superkingdom=Archaea&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA408129&tax_superkingdom=Archaea&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA408129&tax_superkingdom=Archaea", "results": [{"value": "Archaea", "label": "Archaea", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA408129", "selected": true}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA408129&tax_superkingdom=Archaea", "results": [{"value": "Stenosarchaea group", "label": "Stenosarchaea group", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA408129&tax_superkingdom=Archaea&tax_clade=Stenosarchaea+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA408129&tax_superkingdom=Archaea", "results": [{"value": "Thermoproteati", "label": "Thermoproteati", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA408129&tax_superkingdom=Archaea&tax_kingdom=Thermoproteati", "selected": false}, {"value": "Methanobacteriati", "label": "Methanobacteriati", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA408129&tax_superkingdom=Archaea&tax_kingdom=Methanobacteriati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA408129&tax_superkingdom=Archaea", "results": [{"value": "Nitrososphaerota", "label": "Nitrososphaerota", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA408129&tax_superkingdom=Archaea&tax_phylum=Nitrososphaerota", "selected": false}, {"value": "Methanobacteriota", "label": "Methanobacteriota", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA408129&tax_superkingdom=Archaea&tax_phylum=Methanobacteriota", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 177.26860000402667}