{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA404067\" and tax_clade = \"Amoebozoa\"", "rows": [[414809, "PRJNA404067_P_NODE_42481_length_186_cov_2.624000_g42094_i0", "PRJNA404067", "42481", "186", "2.624", "4.88064", "Vannella septentrionalis", "197531", "Discosea", "other_Eukaryota", "152", "1.52e-32", "", "NTclustered", "gi|300078499|gb|GU001161.1|", "197531", "g42094", "i0", "98.824", "46.247311827957", "85", "1", "94", "0", "50", "134", "2219", "2135", "Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence", "blastn", "8602", "152", "1", "Eukaryota", "Amoebozoa", null, "Discosea", "Flabellinia", null, "Vannellidae", "Vannella", "Vannella septentrionalis"], [2965150, "PRJNA404067_P_NODE_13363_length_286_cov_1.786667_g12976_i0", "PRJNA404067", "13363", "286", "1.786667", "5.10986762", "Vexillifera bacillipedes", "1105345", "Discosea", "other_Eukaryota", "503", "6.069999999999998e-138", "", "NTclustered", "gi|399764261|gb|JQ271772.1|", "1105345", "g12976", "i0", "98.264", "8.57692307692308", "288", "3", "100", "1", "1", "286", "299", "12", "Vexillifera bacillipedes strain 6HZM 18S ribosomal RNA gene, partial sequence", "blastn", "2453", "503", "1", "Eukaryota", "Amoebozoa", null, "Discosea", "Flabellinia", "Dactylopodida", "Vexilliferidae", "Vexillifera", "Vexillifera bacillipedes"], [2965161, "PRJNA404067_P_NODE_14483_length_273_cov_1.160377_g14096_i0", "PRJNA404067", "14483", "273", "1.160377", "3.16782921", "Grellamoeba robusta", "690712", "Evosea", "other_Eukaryota", "300", "8.11e-77", "", "NTclustered", "gi|268549248|gb|GQ438740.1|", "690712", "g14096", "i0", "86.861", "93.6849816849817", "274", "28", "99", "6", "4", "273", "1583", "1852", "Amoebozoa sp. 4168 clone 111 small subunit ribosomal RNA gene, partial sequence", "blastn", "25576", "300", "1", "Eukaryota", "Amoebozoa", null, "Evosea", "Variosea", "Fractovitellida", "Soliformoviidae", "Grellamoeba", "Grellamoeba robusta"], [2965355, "PRJNA404067_P_NODE_28003_length_216_cov_0.890323_g27616_i0", "PRJNA404067", "28003", "216", "0.890323", "1.92309768", "Didymium environmental sample", "1173723", "Evosea", "other_Eukaryota", "265", "2.25e-66", "", "NTclustered", "gi|407196931|gb|JX545305.1|", "1173723", "g27616", "i0", "88.889", "38.8055555555556", "216", "23", "99", "1", "2", "216", "114", "329", "Didymium environmental sample clone HCA_D08-36 28S ribosomal RNA gene, partial sequence", "blastn", "8382", "265", "1", "Eukaryota", "Amoebozoa", null, "Evosea", "Eumycetozoa", "Physariida", "Didymiaceae", null, "Didymium environmental sample"], [6792211, "PRJNA404067_P_NODE_19806_length_237_cov_22.352273_g19419_i0", "PRJNA404067", "19806", "237", "22.352273", "52.97488701", "uncultured Amoebozoa", "590481", "Root_unresolved", "Root_unresolved", "433", "6.5e-117", "", "NTclustered", "gi|259906315|gb|GQ844618.1|", "590481", "g19419", "i0", "99.578", "83.1518987341772", "237", "1", "100", "0", "1", "237", "385", "149", "Uncultured Amoebozoa clone TB0-37 18S ribosomal RNA gene, partial sequence", "blastn", "19707", "433", "1", "Eukaryota", "Amoebozoa", null, null, null, null, null, null, "uncultured Amoebozoa"], [8733950, "PRJNA404067_P_NODE_11367_length_315_cov_15.492126_g10982_i0", "PRJNA404067", "11367", "315", "15.492126", "48.8001969", "Eukaryota", "2759", "unresolved_Eukaryota", "other_Eukaryota", "364", "3.3299999999999986e-96", "", "NTclustered", "gi|54306228|gb|AY626163.1|", "297386", "g10982", "i0", "95.982", "68.5174603174603", "224", "9", "71", "0", "92", "315", "615", "392", "Lobosea sp. Borok small subunit ribosomal RNA gene, partial sequence", "blastn", "21583", "364", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", null, null, null, null, "Lobosea sp. Borok"], [9342625, "PRJNA404067_P_NODE_17628_length_248_cov_1.048128_g17241_i0", "PRJNA404067", "17628", "248", "1.048128", "2.59935744", "uncultured Amoebozoa", "590481", "Root_unresolved", "Root_unresolved", "363", "9.119999999999997e-96", "", "NTclustered", "gi|399532124|gb|JQ627408.1|", "590481", "g17241", "i0", "93.145", "95.5443548387097", "248", "15", "99", "2", "1", "247", "1104", "858", "Uncultured Amoebozoa clone B1_7_1E_85 small subunit ribosomal RNA gene, partial sequence", "blastn", "23695", "363", "1", "Eukaryota", "Amoebozoa", null, null, null, null, null, null, "uncultured Amoebozoa"], [12560153, "PRJNA404067_P_NODE_42030_length_188_cov_8.543307_g41643_i0", "PRJNA404067", "42030", "188", "8.543307", "16.06141716", "Eukaryota", "2759", "unresolved_Eukaryota", "other_Eukaryota", "326", "8.6e-85", "", "NTclustered", "gi|441475833|emb|FN562425.4|", "688089", "g41643", "i0", "97.884", "12.0425531914894", "189", "3", "100", "1", "1", "188", "356", "544", "Amoebozoa sp. SZA36 18S rRNA gene, isolate SZA36", "blastn", "2264", "326", "1", "Eukaryota", "Amoebozoa", null, null, null, null, null, null, "Amoebozoa sp. SZA36"], [13168325, "PRJNA404067_P_NODE_24791_length_223_cov_3.641975_g24404_i0", "PRJNA404067", "24791", "223", "3.641975", "8.12160425", "Vexillifera bacillipedes", "1105345", "Discosea", "other_Eukaryota", "401", "1.7099999999999992e-107", "", "NTclustered", "gi|354720325|gb|HQ687484.1|", "1105345", "g24404", "i0", "99.103", "16.9551569506726", "223", "2", "100", "0", "1", "223", "882", "1104", "Vexillifera bacillipedes strain TIL2 small subunit ribosomal RNA gene, partial sequence", "blastn", "3781", "401", "1", "Eukaryota", "Amoebozoa", null, "Discosea", "Flabellinia", "Dactylopodida", "Vexilliferidae", "Vexillifera", "Vexillifera bacillipedes"], [13834683, "PRJNA404067_P_NODE_15171_length_266_cov_1.985366_g14784_i0", "PRJNA404067", "15171", "266", "1.985366", "5.28107356", "Vermamoeba", "1260114", "Tubulinea", "other_Eukaryota", "459", "1.2299999999999998e-124", "", "NTclustered", "gi|909719645|gb|KT185625.1|", "5778", "g14784", "i0", "97.744", "3", "266", "6", "100", "0", "1", "266", "5350", "5085", "Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence", "blastn", "798", "459", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"], [15717571, "PRJNA404067_P_NODE_44353_length_171_cov_5.654545_g43966_i0", "PRJNA404067", "44353", "171", "5.654545", "9.66927195", "Vermamoeba vermiformis", "5778", "Tubulinea", "other_Eukaryota", "313", "5.95e-81", "", "NTclustered", "gi|909719645|gb|KT185625.1|", "5778", "g43966", "i0", "100", "83.6783625730994", "169", "0", "99", "0", "3", "171", "4858", "4690", "Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence", "blastn", "14309", "313", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"], [16383589, "PRJNA404067_P_NODE_16413_length_256_cov_2.835897_g16026_i0", "PRJNA404067", "16413", "256", "2.835897", "7.25989632", "Tubulinea", "555369", "Tubulinea", "other_Eukaryota", "473", "4.189999999999999e-129", "", "NTclustered", "gi|399764177|gb|JQ271688.1|", "5778", "g16026", "i0", "100", "100", "256", "0", "100", "0", "1", "256", "141", "396", "Hartmannella vermiformis strain ECH26 18S ribosomal RNA gene, partial sequence", "blastn", "25600", "473", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"], [16383593, "PRJNA404067_P_NODE_16833_length_253_cov_16.411458_g16446_i0", "PRJNA404067", "16833", "253", "16.411458", "41.52098874", "Flamella", "490353", "Evosea", "other_Eukaryota", "350", "7.27e-92", "", "NTclustered", "gi|163943979|gb|EU186023.1|", "490516", "g16446", "i0", "100", "76.1778656126482", "189", "0", "100", "0", "1", "189", "1708", "1520", "Flamella balnearia 18S ribosomal RNA gene, partial sequence", "blastn", "19273", "350", "1", "Eukaryota", "Amoebozoa", null, "Evosea", "Variosea", null, "Flamellidae", "Flamella", "Flamella balnearia"], [16383704, "PRJNA404067_P_NODE_24873_length_223_cov_1.623457_g24486_i0", "PRJNA404067", "24873", "223", "1.623457", "3.62030911", "Eukaryota", "2759", "unresolved_Eukaryota", "other_Eukaryota", "374", "3.72e-99", "", "NTclustered", "gi|300078496|gb|GU001158.1|", "5778", "g24486", "i0", "96.861", "44.2017937219731", "223", "7", "100", "0", "1", "223", "1221", "999", "Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence", "blastn", "9857", "374", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"], [16991957, "PRJNA404067_P_NODE_16874_length_253_cov_1.916667_g16487_i0", "PRJNA404067", "16874", "253", "1.916667", "4.84916751", "Physarum polycephalum", "5791", "Evosea", "other_Eukaryota", "364", "2.5999999999999998e-96", "", "NTclustered", "gi|3221|emb|V01159.1|", "5791", "g16487", "i0", "92.885", "8.41897233201581", "253", "14", "100", "4", "1", "253", "2037", "2285", "Physarum polycephalum gene encoding 5.8S rRNA and 26S rRNA", "blastn", "2130", "364", "1", "Eukaryota", "Amoebozoa", null, "Evosea", "Eumycetozoa", "Physariida", "Physaraceae", "Physarum", "Physarum polycephalum"], [18266100, "PRJNA404067_P_NODE_19235_length_239_cov_4.157303_g18848_i0", "PRJNA404067", "19235", "239", "4.157303", "9.93595417", "Cochliopodium larifeili", "1017091", "Discosea", "other_Eukaryota", "412", "8.549999999999998e-111", "", "NTclustered", "gi|330902861|gb|JF298256.1|", "1017091", "g18848", "i0", "97.917", "71.9707112970711", "240", "2", "100", "3", "1", "239", "516", "279", "Cochliopodium larifeili clone 907 18S ribosomal RNA gene, partial sequence", "blastn", "17201", "412", "1", "Eukaryota", "Amoebozoa", null, "Discosea", null, "Himatismenida", "Cochliopodiidae", "Cochliopodium", "Cochliopodium larifeili"], [20816507, "PRJNA404067_P_NODE_41377_length_191_cov_2.176923_g40990_i0", "PRJNA404067", "41377", "191", "2.176923", "4.15792293", "Vexillifera bacillipedes", "1105345", "Discosea", "other_Eukaryota", "300", "5.31e-77", "", "NTclustered", "gi|354720325|gb|HQ687484.1|", "1105345", "g40990", "i0", "95.312", "26.4607329842932", "192", "3", "100", "4", "1", "191", "220", "406", "Vexillifera bacillipedes strain TIL2 small subunit ribosomal RNA gene, partial sequence", "blastn", "5054", "300", "1", "Eukaryota", "Amoebozoa", null, "Discosea", "Flabellinia", "Dactylopodida", "Vexilliferidae", "Vexillifera", "Vexillifera bacillipedes"], [24032917, "PRJNA404067_P_NODE_14379_length_274_cov_1.197183_g13992_i0", "PRJNA404067", "14379", "274", "1.197183", "3.28028142", "Acanthamoeba castellanii", "5755", "Discosea", "other_Eukaryota", "119", "4.26e-30", "", "NR", "NP_042542.1", "5755", "g13992", "i0", "76.5", "0.930656934306569", "85", "19", "93.1", "1", "2", "256", "139", "222", "NP_042542.1 NADH dehydrogenasesubunit 1 [Acanthamoeba castellanii]", "diamond", "255", "119", "1", "Eukaryota", "Amoebozoa", null, "Discosea", null, "Longamoebia", "Acanthamoebidae", "Acanthamoeba", "Acanthamoeba castellanii"], [24641070, "PRJNA404067_P_NODE_30100_length_211_cov_1.400000_g29713_i0", "PRJNA404067", "30100", "211", "1.4", "2.954", "Diderma hemisphaericum", "385442", "Evosea", "other_Eukaryota", "267", "6.079999999999999e-67", "", "NTclustered", "gi|2317681392|gb|OP650759.1|", "385442", "g29713", "i0", "96.875", "79.5924170616114", "160", "4", "76", "1", "52", "211", "422", "264", "Diderma hemisphaericum strain MA-Fungi 90974 small subunit ribosomal RNA gene, partial sequence", "blastn", "16794", "267", "1", "Eukaryota", "Amoebozoa", null, "Evosea", "Eumycetozoa", "Physariida", "Didymiaceae", "Diderma", "Diderma hemisphaericum"], [26758804, "PRJNA404067_P_NODE_38061_length_201_cov_4.485714_g37674_i0", "PRJNA404067", "38061", "201", "4.485714", "9.01628514", "Dictyostelium discoideum AX4", "352472", "Evosea", "other_Eukaryota", "70.1", "1.68e-13", "", "NR", "XP_647508.1", "352472", "g37674", "i0", "64.8", "2.41791044776119", "54", "19", "80.6", "0", "200", "39", "67", "120", "XP_647508.1 hypothetical protein DDB_G0268038 [Dictyostelium discoideum AX4]", "diamond", "486", "70.1", "1", "Eukaryota", "Amoebozoa", null, "Evosea", "Eumycetozoa", "Dictyosteliales", "Dictyosteliaceae", "Dictyostelium", "Dictyostelium discoideum"], [26758805, "PRJNA404067_P_NODE_38781_length_201_cov_0.914286_g38394_i0", "PRJNA404067", "38781", "201", "0.914286", "1.83771486", "Acanthamoeba castellanii str. Neff", "1257118", "Discosea", "other_Eukaryota", "45.4", "0.00233", "", "NR", "XP_004337724.1", "1257118", "g38394", "i0", "36.7", "0.73134328358209", "49", "31", "73.1", "0", "3", "149", "362", "410", "XP_004337724.1 uncharacterized protein ACA1_378610 [Acanthamoeba castellanii str. Neff]", "diamond", "147", "45.4", "1", "Eukaryota", "Amoebozoa", null, "Discosea", null, "Longamoebia", "Acanthamoebidae", "Acanthamoeba", "Acanthamoeba castellanii"], [27328430, "PRJNA404067_P_NODE_40783_length_193_cov_4.606061_g40396_i0", "PRJNA404067", "40783", "193", "4.606061", "8.88969773", "Acanthamoeba castellanii str. Neff", "1257118", "Discosea", "other_Eukaryota", "57", "1.12e-8", "", "NR", "XP_004334523.1", "1257118", "g40396", "i0", "92.3", "0.404145077720207", "26", "2", "40.4", "0", "188", "111", "69", "94", "XP_004334523.1 ribosomal protein s27, putative [Acanthamoeba castellanii str. Neff]", "diamond", "78", "57", "1", "Eukaryota", "Amoebozoa", null, "Discosea", null, "Longamoebia", "Acanthamoebidae", "Acanthamoeba", "Acanthamoeba castellanii"], [29412157, "PRJNA404067_P_NODE_6529_length_483_cov_4.305687_g6152_i0", "PRJNA404067", "6529", "483", "4.305687", "20.79646821", "Acanthamoeba castellanii str. Neff", "1257118", "Discosea", "other_Eukaryota", "69.3", "2.54e-10", "", "NR", "XP_004338928.1", "1257118", "g6152", "i0", "64.6", "0.608695652173913", "48", "17", "29.8", "0", "76", "219", "591", "638", "XP_004338928.1 long chain acylcoA synthetase [Acanthamoeba castellanii str. Neff]", "diamond", "294", "69.3", "1", "Eukaryota", "Amoebozoa", null, "Discosea", null, "Longamoebia", "Acanthamoebidae", "Acanthamoeba", "Acanthamoeba castellanii"]], "truncated": false, "filtered_table_rows_count": 23, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA404067", "p1": "Amoebozoa"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA404067&tax_clade=Amoebozoa", "results": [{"value": "PRJNA404067", "label": "PRJNA404067", "count": 23, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=Amoebozoa", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA404067&tax_clade=Amoebozoa", "results": [{"value": "blastn", "label": "blastn", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA404067&tax_clade=Amoebozoa&analysis=blastn", "selected": false}, {"value": "diamond", "label": "diamond", "count": 5, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA404067&tax_clade=Amoebozoa&analysis=diamond", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA404067&tax_clade=Amoebozoa", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 23, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA404067&tax_clade=Amoebozoa&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA404067&tax_clade=Amoebozoa", "results": [{"value": "Amoebozoa", "label": "Amoebozoa", "count": 23, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA404067", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA404067&tax_clade=Amoebozoa", "results": [], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA404067&tax_clade=Amoebozoa", "results": [{"value": "Discosea", "label": "Discosea", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA404067&tax_clade=Amoebozoa&tax_phylum=Discosea", "selected": false}, {"value": "Evosea", "label": "Evosea", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA404067&tax_clade=Amoebozoa&tax_phylum=Evosea", "selected": false}, {"value": "Tubulinea", "label": "Tubulinea", "count": 5, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA404067&tax_clade=Amoebozoa&tax_phylum=Tubulinea", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 351.4668230054667}