{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA395690\", tax_kingdom = \"Pseudomonadati\" and tax_phylum = \"Thermodesulfobacteriota\"", "rows": [[411470, "PRJNA395690_P_NODE_14421_length_214_cov_1.781818_g14269_i0", "PRJNA395690", "14421", "214", "1.781818", "3.81309052", "Thermodesulfobacteriota bacterium", "2202153", "Bacteria", "Bacteria", "209", "1.06e-49", "", "NTclustered", "gi|2893358420|emb|OZ220712.1|", "2202153", "g14269", "i0", "85.047", "264.668224299065", "214", "23", "99", "8", "4", "214", "1712020", "1711813", "MAG: Thermodesulfobacteriota bacterium isolate 564989d4-0a31-48dd-8468-51938819ad86 genome assembly, chromosome: 1", "blastn", "56639", "209", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", null, null, null, null, "Thermodesulfobacteriota bacterium"], [411710, "PRJNA395690_P_NODE_33641_length_163_cov_0.894737_g33489_i0", "PRJNA395690", "33641", "163", "0.894737", "1.45842131", "Desulfobulbus oralis", "1986146", "Bacteria", "Bacteria", "58.4", "2.92e-4", "", "NTclustered", "gi|1343450889|gb|CP021255.1|", "1986146", "g33489", "i0", "80.22", "1.14110429447853", "91", "6", "91", "7", "1", "85", "1109050", "1109134", "Desulfobulbus oralis strain HOT041/ORNL chromosome, complete genome", "blastn", "186", "58.4", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfobulbia", "Desulfobulbales", "Desulfobulbaceae", "Desulfobulbus", "Desulfobulbus oralis"], [7456977, "PRJNA395690_P_NODE_33606_length_163_cov_0.894737_g33454_i0", "PRJNA395690", "33606", "163", "0.894737", "1.45842131", "Desulfuromonadales", "69541", "Bacteria", "Bacteria", "189", "9.92e-44", "", "NTclustered", "gi|2304895958|gb|CP092109.1|", "2847045", "g33454", "i0", "88.608", "169.343558282209", "158", "14", "96", "4", "8", "163", "1359638", "1359793", "Geoalkalibacter halelectricus strain SAP-1 chromosome", "blastn", "27603", "189", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfuromonadia", "Desulfuromonadales", "Geoalkalibacteraceae", "Geoalkalibacter", "Geoalkalibacter halelectricus"], [20205281, "PRJNA395690_P_NODE_6476_length_316_cov_2.411985_g6325_i0", "PRJNA395690", "6476", "316", "2.411985", "7.6218726", "Geobacter", "28231", "Bacteria", "Bacteria", "265", "3.49e-66", "", "NTclustered", "gi|779731694|gb|CP010430.1|", "35554", "g6325", "i0", "89.524", "125.351265822785", "210", "20", "66", "2", "98", "306", "2783611", "2783403", "Geobacter sulfurreducens strain AM-1 genome", "blastn", "39611", "265", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfuromonadia", "Geobacterales", "Geobacteraceae", "Geobacter", "Geobacter sulfurreducens"], [27265079, "PRJNA395690_P_NODE_32683_length_164_cov_0.886957_g32531_i0", "PRJNA395690", "32683", "164", "0.886957", "1.45460948", "Syntrophaceae bacterium", "2052184", "Bacteria", "Bacteria", "97.4", "5.72e-22", "", "NR", "MEN6472527.1", "2052184", "g32531", "i0", "83.3", "1.97560975609756", "54", "9", "98.8", "0", "162", "1", "108", "161", "MEN6472527.1 amidase [Syntrophaceae bacterium]", "diamond", "324", "97.4", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Syntrophia", "Syntrophales", "Syntrophaceae", null, "Syntrophaceae bacterium"], [29081700, "PRJNA395690_P_NODE_34008_length_162_cov_2.345133_g33856_i0", "PRJNA395690", "34008", "162", "2.345133", "3.79911546", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "78.6", "2.86e-15", "", "NR", "MCB2226183.1", "2528248", "g33856", "i0", "69.8", "11.6296296296296", "53", "16", "98.1", "0", "161", "3", "742", "794", "MCB2226183.1 multidrug efflux RND transporter permease subunit [Desulfarculaceae bacterium]", "diamond", "1884", "78.6", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfarculia", "Desulfarculales", "Desulfarculaceae", null, "Desulfarculaceae bacterium"], [29176526, "PRJNA395690_P_NODE_6669_length_312_cov_1.346008_g6517_i0", "PRJNA395690", "6669", "312", "1.346008", "4.19954496", "root", "1", "Root_unresolved", "Root_unresolved", "160", "2.0199999999999998e-46", "", "NR", "WP_207690708.1", "45656", "g6517", "i0", "68", "12.8269230769231", "103", "33", "99", "0", "310", "2", "68", "170", "WP_207690708.1 DNA adenine methylase [Desulfonema limicola]", "diamond", "4002", "161", "0.993788819875776", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfobacteria", "Desulfobacterales", "Desulfococcaceae", "Desulfonema", "Desulfonema limicola"], [30345406, "PRJNA395690_P_NODE_12112_length_234_cov_1.405405_g11960_i0", "PRJNA395690", "12112", "234", "1.405405", "3.2886477", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "71.6", "9.36e-14", "", "NR", "OGU10987.1", "1798318", "g11960", "i0", "73.9", "3.55128205128205", "46", "12", "59", "0", "91", "228", "1", "46", "OGU10987.1 MAG: GxxExxY protein [Geobacteraceae bacterium GWC2_58_44]", "diamond", "831", "71.6", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfuromonadia", "Geobacterales", "Geobacteraceae", null, "Geobacteraceae bacterium GWC2_58_44"], [30391775, "PRJNA395690_P_NODE_29893_length_166_cov_0.871795_g29741_i0", "PRJNA395690", "29893", "166", "0.871795", "1.4471797", "Smithellaceae bacterium", "2964540", "Bacteria", "Bacteria", "59.7", "4.29e-9", "", "NR", "HOX16423.1", "2964540", "g29741", "i0", "73", "0.668674698795181", "37", "10", "66.9", "0", "5", "115", "9", "45", "HOX16423.1 beta-propeller fold lactonase family protein [Smithellaceae bacterium]", "diamond", "111", "59.7", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Syntrophia", "Syntrophales", "Smithellaceae", null, "Smithellaceae bacterium"], [30565713, "PRJNA395690_P_NODE_35013_length_162_cov_0.902655_g34861_i0", "PRJNA395690", "35013", "162", "0.902655", "1.4623011", "Bacteria", "2", "Bacteria", "Bacteria", "65.1", "1.59e-10", "", "NR", "WP_145023015.1", "345631", "g34861", "i0", "60.7", "12.8518518518519", "56", "17", "98.1", "2", "160", "2", "396", "449", "WP_145023015.1 exodeoxyribonuclease V subunit beta [Geobacter argillaceus]", "diamond", "2082", "65.5", "0.993893129770992", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfuromonadia", "Geobacterales", "Geobacteraceae", "Geobacter", "Geobacter argillaceus"], [30801954, "PRJNA395690_P_NODE_15514_length_206_cov_1.891720_g15362_i0", "PRJNA395690", "15514", "206", "1.89172", "3.8969432", "Geobacter sulfurreducens", "35554", "Bacteria", "Bacteria", "40.4", "0.0441", "", "NR", "WP_235044949.1", "35554", "g15362", "i0", "35.6", "0.859223300970874", "59", "36", "83", "1", "182", "12", "4", "62", "WP_235044949.1 hypothetical protein [Geobacter sulfurreducens]", "diamond", "177", "40.4", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfuromonadia", "Geobacterales", "Geobacteraceae", "Geobacter", "Geobacter sulfurreducens"]], "truncated": false, "filtered_table_rows_count": 11, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_kingdom\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA395690", "p1": "Pseudomonadati", "p2": "Thermodesulfobacteriota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA395690&tax_kingdom=Pseudomonadati&tax_phylum=Thermodesulfobacteriota", "results": [{"value": "PRJNA395690", "label": "PRJNA395690", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_kingdom=Pseudomonadati&tax_phylum=Thermodesulfobacteriota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA395690&tax_kingdom=Pseudomonadati&tax_phylum=Thermodesulfobacteriota", "results": [{"value": "diamond", "label": "diamond", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA395690&tax_kingdom=Pseudomonadati&tax_phylum=Thermodesulfobacteriota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA395690&tax_kingdom=Pseudomonadati&tax_phylum=Thermodesulfobacteriota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA395690&tax_kingdom=Pseudomonadati&tax_phylum=Thermodesulfobacteriota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA395690&tax_kingdom=Pseudomonadati&tax_phylum=Thermodesulfobacteriota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA395690&tax_kingdom=Pseudomonadati&tax_phylum=Thermodesulfobacteriota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA395690&tax_kingdom=Pseudomonadati&tax_phylum=Thermodesulfobacteriota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA395690&tax_phylum=Thermodesulfobacteriota", "selected": true}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA395690&tax_kingdom=Pseudomonadati&tax_phylum=Thermodesulfobacteriota", "results": [{"value": "Thermodesulfobacteriota", "label": "Thermodesulfobacteriota", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA395690&tax_kingdom=Pseudomonadati", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 463.69599500030745}