{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA390533\", tax_kingdom = \"Pseudomonadati\" and tax_phylum = \"Thermodesulfobacteriota\"", "rows": [[409824, "PRJNA390533_P_NODE_42481_length_171_cov_1.166667_g41454_i0", "PRJNA390533", "42481", "171", "1.166667", "1.99500057", "Geoalkalibacter halelectricus", "2847045", "Bacteria", "Bacteria", "56.5", "0.001", "", "NTclustered", "gi|2304895958|gb|CP092109.1|", "2847045", "g41454", "i0", "100", "0.175438596491228", "30", "0", "18", "0", "35", "64", "3296750", "3296721", "Geoalkalibacter halelectricus strain SAP-1 chromosome", "blastn", "30", "56.5", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfuromonadia", "Desulfuromonadales", "Geoalkalibacteraceae", "Geoalkalibacter", "Geoalkalibacter halelectricus"], [1684495, "PRJNA390533_P_NODE_22082_length_353_cov_3.993631_g21058_i0", "PRJNA390533", "22082", "353", "3.993631", "14.09751743", "Desulfovibrio piger", "901", "Bacteria", "Bacteria", "595", "1.2299999999999994e-165", "", "NTclustered", "gi|2548467271|emb|OX636706.1|", "901", "g21058", "i0", "98.24", "162.504249291785", "341", "4", "96", "1", "15", "353", "515370", "515710", "Desulfovibrio piger isolate DSM32187 genome assembly, chromosome: 1", "blastn", "57364", "595", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfovibrionia", "Desulfovibrionales", "Desulfovibrionaceae", "Desulfovibrio", "Desulfovibrio piger"], [26726686, "PRJNA390533_P_NODE_17161_length_435_cov_1.393939_g16146_i0", "PRJNA390533", "17161", "435", "1.393939", "6.06363465", "Candidatus Electrothrix yaqonensis", "3344825", "Bacteria", "Bacteria", "75.1", "7.15e-14", "", "NR", "XOF33614.1", "3344825", "g16146", "i0", "58", "0.475862068965517", "69", "29", "47.6", "0", "435", "229", "76", "144", "XOF33614.1 MAG: hypothetical protein ACL93V_16730 [Candidatus Electrothrix sp. YB6]", "diamond", "207", "75.1", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfobulbia", "Desulfobulbales", "Desulfobulbaceae", "Candidatus Electrothrix", "Candidatus Electrothrix yaqonensis"], [27359912, "PRJNA390533_P_NODE_50723_length_150_cov_1.360360_g49696_i0", "PRJNA390533", "50723", "150", "1.36036", "2.04054", "Desulfobulbaceae bacterium", "2053307", "Bacteria", "Bacteria", "42.7", "0.0107", "", "NR", "HHL33362.1", "2053307", "g49696", "i0", "62.1", "1.2", "29", "11", "58", "0", "150", "64", "273", "301", "HHL33362.1 thermonuclease family protein [Desulfobulbaceae bacterium]", "diamond", "180", "42.7", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfobulbia", "Desulfobulbales", "Desulfobulbaceae", null, "Desulfobulbaceae bacterium"], [27580723, "PRJNA390533_P_NODE_37284_length_194_cov_1.496774_g36257_i0", "PRJNA390533", "37284", "194", "1.496774", "2.90374156", "Desulfosarcinaceae bacterium", "3036616", "Bacteria", "Bacteria", "80.5", "1.98e-16", "", "NR", "MEJ2038687.1", "3036616", "g36257", "i0", "65", "0.927835051546392", "60", "21", "92.8", "0", "181", "2", "189", "248", "MEJ2038687.1 AraC family transcriptional regulator [Desulfosarcinaceae bacterium]", "diamond", "180", "80.5", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfobacteria", "Desulfobacterales", "Desulfosarcinaceae", null, "Desulfosarcinaceae bacterium"], [27724292, "PRJNA390533_P_NODE_33924_length_216_cov_1.288136_g32897_i0", "PRJNA390533", "33924", "216", "1.288136", "2.78237376", "Candidatus Desulfatibia", "2841680", "Bacteria", "Bacteria", "132", "2.5799999999999996e-35", "", "NR", "MEW6594634.1", "2202153", "g32897", "i0", "81.4", "11.6527777777778", "70", "13", "97.2", "0", "211", "2", "214", "283", "MEW6594634.1 peptide-methionine (R)-S-oxide reductase MsrB [Thermodesulfobacteriota bacterium]", "diamond", "2517", "132", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", null, null, null, null, "Thermodesulfobacteriota bacterium"], [27739031, "PRJNA390533_P_NODE_47604_length_156_cov_1.649573_g46577_i0", "PRJNA390533", "47604", "156", "1.649573", "2.57333388", "Candidatus Magnetoglobus multicellularis str. Araruama", "890399", "Bacteria", "Bacteria", "52", "9.18e-7", "", "NR", "ETR73312.1", "890399", "g46577", "i0", "42.9", "0.942307692307692", "49", "28", "94.2", "0", "5", "151", "25", "73", "ETR73312.1 MAG: hypothetical protein OMM_07014 [Candidatus Magnetoglobus multicellularis str. Araruama]", "diamond", "147", "52", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfobacteria", "Desulfobacterales", "Desulfobacteraceae", "Candidatus Magnetoglobus", "Candidatus Magnetoglobus multicellularis"], [28149248, "PRJNA390533_P_NODE_38705_length_187_cov_0.878378_g37678_i0", "PRJNA390533", "38705", "187", "0.878378", "1.64256686", "Geomonas sp. RF6", "2897342", "Bacteria", "Bacteria", "72.4", "6.14e-13", "", "NR", "WP_230997250.1", "2897342", "g37678", "i0", "57.4", "3.83422459893048", "61", "26", "97.9", "0", "187", "5", "271", "331", "WP_230997250.1 hypothetical protein [Geomonas sp. RF6]", "diamond", "717", "72.4", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfuromonadia", "Geobacterales", "Geobacteraceae", "Geomonas", "Geomonas sp. RF6"], [28386912, "PRJNA390533_P_NODE_34626_length_211_cov_1.395349_g33599_i0", "PRJNA390533", "34626", "211", "1.395349", "2.94418639", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "76.3", "7.81e-15", "", "NR", "HBG17989.1", "2053307", "g33599", "i0", "53.8", "3.75355450236967", "65", "21", "89.6", "2", "21", "209", "31", "88", "HBG17989.1 FRG domain-containing protein [Desulfobulbaceae bacterium]", "diamond", "792", "76.3", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfobulbia", "Desulfobulbales", "Desulfobulbaceae", null, "Desulfobulbaceae bacterium"], [28591249, "PRJNA390533_P_NODE_45727_length_161_cov_1.327869_g44700_i0", "PRJNA390533", "45727", "161", "1.327869", "2.13786909", "Syntrophaceae bacterium", "2052184", "Bacteria", "Bacteria", "79", "1.59e-15", "", "NR", "MBN1472205.1", "2052184", "g44700", "i0", "66", "0.987577639751553", "53", "18", "98.8", "0", "161", "3", "217", "269", "MBN1472205.1 glycosyltransferase [Syntrophaceae bacterium]", "diamond", "159", "79", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Syntrophia", "Syntrophales", "Syntrophaceae", null, "Syntrophaceae bacterium"], [28780452, "PRJNA390533_P_NODE_49767_length_151_cov_1.919643_g48740_i0", "PRJNA390533", "49767", "151", "1.919643", "2.89866093", "Desulfovermiculus sp.", "2821143", "Bacteria", "Bacteria", "61.6", "2.3e-9", "", "NR", "MDZ7760072.1", "2821143", "g48740", "i0", "59.2", "6.67549668874172", "49", "20", "97.4", "0", "1", "147", "278", "326", "MDZ7760072.1 flippase [Desulfovermiculus sp.]", "diamond", "1008", "61.6", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfovibrionia", "Desulfovibrionales", "Desulfohalobiaceae", "Desulfovermiculus", "Desulfovermiculus sp."], [29002034, "PRJNA390533_P_NODE_34328_length_213_cov_1.741379_g33301_i0", "PRJNA390533", "34328", "213", "1.741379", "3.70913727", "Syntrophales bacterium", "2928017", "Bacteria", "Bacteria", "50.1", "1.36e-5", "", "NR", "HET6460672.1", "2928017", "g33301", "i0", "38.5", "1.90140845070423", "65", "40", "91.5", "0", "2", "196", "45", "109", "HET6460672.1 hypothetical protein [Syntrophales bacterium]", "diamond", "405", "50.1", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Syntrophia", "Syntrophales", null, null, "Syntrophales bacterium"], [29870968, "PRJNA390533_P_NODE_23951_length_326_cov_1.543554_g22925_i0", "PRJNA390533", "23951", "326", "1.543554", "5.03198604", "Bacteria", "2", "Bacteria", "Bacteria", "113", "2.3699999999999997e-30", "", "NR", "PIU30719.1", "1974095", "g22925", "i0", "74.3", "3.3680981595092", "70", "18", "64.4", "0", "272", "63", "1", "70", "PIU30719.1 MAG: hypothetical protein COT06_12065 [Syntrophobacteraceae bacterium CG07_land_8_20_14_0_80_61_8]", "diamond", "1098", "113", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Syntrophobacteria", "Syntrophobacterales", "Syntrophobacteraceae", null, "Syntrophobacteraceae bacterium CG07_land_8_20_14_0_80_61_8"], [31212262, "PRJNA390533_P_NODE_28195_length_274_cov_12.378723_g27168_i0", "PRJNA390533", "28195", "274", "12.378723", "33.91770102", "Desulfovibrionaceae bacterium", "2049043", "Bacteria", "Bacteria", "44.3", "0.0152", "", "NR", "MBQ4133630.1", "2049043", "g27168", "i0", "35.3", "0.558394160583942", "51", "33", "55.8", "0", "87", "239", "379", "429", "MBQ4133630.1 HDIG domain-containing protein [Desulfovibrionaceae bacterium]", "diamond", "153", "44.3", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfovibrionia", "Desulfovibrionales", "Desulfovibrionaceae", null, "Desulfovibrionaceae bacterium"], [31655332, "PRJNA390533_P_NODE_33537_length_218_cov_19.547486_g32510_i0", "PRJNA390533", "33537", "218", "19.547486", "42.61351948", "Desulfovibrionaceae bacterium", "2049043", "Bacteria", "Bacteria", "48.1", "3.37e-4", "", "NR", "MBQ4133630.1", "2049043", "g32510", "i0", "37.3", "0.701834862385321", "51", "32", "70.2", "0", "31", "183", "379", "429", "MBQ4133630.1 HDIG domain-containing protein [Desulfovibrionaceae bacterium]", "diamond", "153", "48.1", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfovibrionia", "Desulfovibrionales", "Desulfovibrionaceae", null, "Desulfovibrionaceae bacterium"], [31908587, "PRJNA390533_P_NODE_48897_length_153_cov_1.675439_g47870_i0", "PRJNA390533", "48897", "153", "1.675439", "2.56342167", "Geobacteraceae bacterium", "2282154", "Bacteria", "Bacteria", "46.2", "6.35e-4", "", "NR", "MCE1226612.1", "2282154", "g47870", "i0", "76", "0.490196078431373", "25", "6", "49", "0", "77", "151", "1", "25", "MCE1226612.1 N-acetylneuraminate synthase family protein [Geobacteraceae bacterium]", "diamond", "75", "46.2", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfuromonadia", "Geobacterales", "Geobacteraceae", null, "Geobacteraceae bacterium"], [31940051, "PRJNA390533_P_NODE_28617_length_268_cov_18.445415_g27590_i0", "PRJNA390533", "28617", "268", "18.445415", "49.4337122", "Desulfovibrionaceae bacterium", "2049043", "Bacteria", "Bacteria", "44.7", "0.0104", "", "NR", "MBQ4133630.1", "2049043", "g27590", "i0", "37.3", "0.57089552238806", "51", "32", "57.1", "0", "81", "233", "379", "429", "MBQ4133630.1 HDIG domain-containing protein [Desulfovibrionaceae bacterium]", "diamond", "153", "44.7", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfovibrionia", "Desulfovibrionales", "Desulfovibrionaceae", null, "Desulfovibrionaceae bacterium"], [32130266, "PRJNA390533_P_NODE_46838_length_158_cov_1.605042_g45811_i0", "PRJNA390533", "46838", "158", "1.605042", "2.53596636", "Desulfosarcina alkanivorans", "571177", "Bacteria", "Bacteria", "47.4", "6.55e-5", "", "NR", "BBO67033.1", "571177", "g45811", "i0", "38.6", "1.67088607594937", "44", "27", "83.5", "0", "149", "18", "4", "47", "BBO67033.1 hypothetical protein DSCA_09630 [Desulfosarcina alkanivorans]", "diamond", "264", "47.4", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfobacteria", "Desulfobacterales", "Desulfosarcinaceae", "Desulfosarcina", "Desulfosarcina alkanivorans"], [32604469, "PRJNA390533_P_NODE_36800_length_197_cov_1.126582_g35773_i0", "PRJNA390533", "36800", "197", "1.126582", "2.21936654", "Syntrophobacteraceae bacterium", "2052185", "Bacteria", "Bacteria", "46.2", "5.03e-4", "", "NR", "HBZ54646.1", "2052185", "g35773", "i0", "47.6", "0.639593908629442", "42", "22", "64", "0", "130", "5", "1", "42", "HBZ54646.1 hypothetical protein [Syntrophobacteraceae bacterium]", "diamond", "126", "46.2", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Syntrophobacteria", "Syntrophobacterales", "Syntrophobacteraceae", null, "Syntrophobacteraceae bacterium"], [32698833, "PRJNA390533_P_NODE_28620_length_268_cov_15.659389_g27593_i0", "PRJNA390533", "28620", "268", "15.659389", "41.96716252", "Desulfovibrionaceae bacterium", "2049043", "Bacteria", "Bacteria", "47", "0.00159", "", "NR", "MBQ4133630.1", "2049043", "g27593", "i0", "37.3", "0.57089552238806", "51", "32", "57.1", "0", "81", "233", "379", "429", "MBQ4133630.1 HDIG domain-containing protein [Desulfovibrionaceae bacterium]", "diamond", "153", "47", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfovibrionia", "Desulfovibrionales", "Desulfovibrionaceae", null, "Desulfovibrionaceae bacterium"]], "truncated": false, "filtered_table_rows_count": 20, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_kingdom\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA390533", "p1": "Pseudomonadati", "p2": "Thermodesulfobacteriota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA390533&tax_kingdom=Pseudomonadati&tax_phylum=Thermodesulfobacteriota", "results": [{"value": "PRJNA390533", "label": "PRJNA390533", "count": 20, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_kingdom=Pseudomonadati&tax_phylum=Thermodesulfobacteriota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA390533&tax_kingdom=Pseudomonadati&tax_phylum=Thermodesulfobacteriota", "results": [{"value": "diamond", "label": "diamond", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA390533&tax_kingdom=Pseudomonadati&tax_phylum=Thermodesulfobacteriota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA390533&tax_kingdom=Pseudomonadati&tax_phylum=Thermodesulfobacteriota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA390533&tax_kingdom=Pseudomonadati&tax_phylum=Thermodesulfobacteriota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 20, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA390533&tax_kingdom=Pseudomonadati&tax_phylum=Thermodesulfobacteriota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA390533&tax_kingdom=Pseudomonadati&tax_phylum=Thermodesulfobacteriota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA390533&tax_kingdom=Pseudomonadati&tax_phylum=Thermodesulfobacteriota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 20, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA390533&tax_phylum=Thermodesulfobacteriota", "selected": true}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA390533&tax_kingdom=Pseudomonadati&tax_phylum=Thermodesulfobacteriota", "results": [{"value": "Thermodesulfobacteriota", "label": "Thermodesulfobacteriota", "count": 20, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA390533&tax_kingdom=Pseudomonadati", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 547.6729740039445}