{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA358009\" and tax_phylum = \"Verrucomicrobiota\"", "rows": [[398381, "PRJNA358009_P_NODE_6681_length_326_cov_2.025271_g6618_i0", "PRJNA358009", "6681", "326", "2.025271", "6.60238346", "uncultured Verrucomicrobiae bacterium", "412056", "Bacteria", "Bacteria", "67.6", "1.09e-6", "", "NTclustered", "gi|2874254019|emb|OY970344.1|", "412056", "g6618", "i0", "93.333", "0.138036809815951", "45", "3", "14", "0", "55", "99", "2184498", "2184454", "MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.c.3 genome assembly, chromosome: 1", "blastn", "45", "67.6", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", null, null, null, "uncultured Verrucomicrobiae bacterium"], [3623689, "PRJNA358009_P_NODE_363_length_546_cov_6.150905_g322_i0", "PRJNA358009", "363", "546", "6.150905", "33.5839413", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "294", "8.08e-75", "", "NTclustered", "gi|2874254019|emb|OY970344.1|", "412056", "g322", "i0", "99.383", "58.1684981684982", "162", "1", "80", "0", "385", "546", "1434748", "1434909", "MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.c.3 genome assembly, chromosome: 1", "blastn", "31760", "294", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", null, null, null, "uncultured Verrucomicrobiae bacterium"], [6775979, "PRJNA358009_P_NODE_826_length_404_cov_25.152113_g768_i0", "PRJNA358009", "826", "404", "25.152113", "101.61453652", "uncultured Verrucomicrobiae bacterium", "412056", "Bacteria", "Bacteria", "322", "2.67e-83", "", "NTclustered", "gi|2874254019|emb|OY970344.1|", "412056", "g768", "i0", "94.286", "52.6534653465347", "210", "12", "75", "0", "1", "210", "737375", "737166", "MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.c.3 genome assembly, chromosome: 1", "blastn", "21272", "322", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", null, null, null, "uncultured Verrucomicrobiae bacterium"], [10602036, "PRJNA358009_P_NODE_269_length_597_cov_10.906934_g230_i0", "PRJNA358009", "269", "597", "10.906934", "65.11439598", "uncultured Verrucomicrobiae bacterium", "412056", "Bacteria", "Bacteria", "499", "1.76e-136", "", "NTclustered", "gi|2874254019|emb|OY970344.1|", "412056", "g230", "i0", "96.678", "76.7219430485762", "301", "8", "78", "2", "195", "494", "736390", "736091", "MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.c.3 genome assembly, chromosome: 1", "blastn", "45803", "499", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", null, null, null, "uncultured Verrucomicrobiae bacterium"], [10602102, "PRJNA358009_P_NODE_7909_length_215_cov_13.981928_g7840_i0", "PRJNA358009", "7909", "215", "13.981928", "30.0611452", "uncultured Verrucomicrobiae bacterium", "412056", "Bacteria", "Bacteria", "353", "4.64e-93", "", "NTclustered", "gi|2874254019|emb|OY970344.1|", "412056", "g7840", "i0", "97.129", "60.6046511627907", "209", "6", "97", "0", "1", "209", "737375", "737167", "MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.c.3 genome assembly, chromosome: 1", "blastn", "13030", "353", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", null, null, null, "uncultured Verrucomicrobiae bacterium"], [14427047, "PRJNA358009_P_NODE_17232_length_157_cov_3.546296_g17163_i0", "PRJNA358009", "17232", "157", "3.546296", "5.56768472", "Haloferula helveola", "490095", "Bacteria", "Bacteria", "187", "3.3999999999999993e-43", "", "NTclustered", "gi|2647781590|dbj|AP024702.1|", "490095", "g17163", "i0", "94.309", "185.96178343949", "123", "5", "78", "2", "30", "151", "775940", "776061", "Haloferula helveola CN-1 DNA, complete genome", "blastn", "29196", "187", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", "Haloferula", "Haloferula helveola"], [15701000, "PRJNA358009_P_NODE_7153_length_273_cov_11.540179_g7086_i0", "PRJNA358009", "7153", "273", "11.540179", "31.50468867", "uncultured Verrucomicrobiae bacterium", "412056", "Bacteria", "Bacteria", "475", "1.2499999999999999e-129", "", "NTclustered", "gi|2874254019|emb|OY970344.1|", "412056", "g7086", "i0", "98.162", "151.03663003663", "272", "5", "99", "0", "1", "272", "734970", "734699", "MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.c.3 genome assembly, chromosome: 1", "blastn", "41233", "475", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", null, null, null, "uncultured Verrucomicrobiae bacterium"], [19524150, "PRJNA358009_P_NODE_576_length_462_cov_14.079903_g522_i0", "PRJNA358009", "576", "462", "14.079903", "65.04915186", "uncultured Verrucomicrobiae bacterium", "412056", "Bacteria", "Bacteria", "833", "0", "", "NTclustered", "gi|2874254019|emb|OY970344.1|", "412056", "g522", "i0", "99.78", "102.655844155844", "454", "1", "98", "0", "8", "461", "736949", "736496", "MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.c.3 genome assembly, chromosome: 1", "blastn", "47427", "833", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", null, null, null, "uncultured Verrucomicrobiae bacterium"], [19524179, "PRJNA358009_P_NODE_7996_length_211_cov_29.876543_g7927_i0", "PRJNA358009", "7996", "211", "29.876543", "63.03950573", "uncultured Verrucomicrobiae bacterium", "412056", "Bacteria", "Bacteria", "342", "9.819999999999999e-90", "", "NTclustered", "gi|2874254019|emb|OY970344.1|", "412056", "g7927", "i0", "96.172", "117.843601895735", "209", "8", "99", "0", "1", "209", "737376", "737584", "MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.c.3 genome assembly, chromosome: 1", "blastn", "24865", "342", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", null, null, null, "uncultured Verrucomicrobiae bacterium"], [23350175, "PRJNA358009_P_NODE_13879_length_165_cov_3.000000_g13810_i0", "PRJNA358009", "13879", "165", "3", "4.95", "uncultured Verrucomicrobiae bacterium", "412056", "Bacteria", "Bacteria", "274", "2.7e-69", "", "NTclustered", "gi|2874254019|emb|OY970344.1|", "412056", "g13810", "i0", "97.5", "23.1818181818182", "160", "4", "97", "0", "1", "160", "405058", "405217", "MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.c.3 genome assembly, chromosome: 1", "blastn", "3825", "274", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", null, null, null, "uncultured Verrucomicrobiae bacterium"], [24624496, "PRJNA358009_P_NODE_1860_length_333_cov_7.193662_g1797_i0", "PRJNA358009", "1860", "333", "7.193662", "23.95489446", "uncultured Verrucomicrobiae bacterium", "412056", "Bacteria", "Bacteria", "211", "4.89e-50", "", "NTclustered", "gi|2874254019|emb|OY970344.1|", "412056", "g1797", "i0", "99.145", "35.5135135135135", "117", "1", "65", "0", "217", "333", "737259", "737375", "MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.c.3 genome assembly, chromosome: 1", "blastn", "11826", "211", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", null, null, null, "uncultured Verrucomicrobiae bacterium"], [24624578, "PRJNA358009_P_NODE_8500_length_195_cov_3.705479_g8431_i0", "PRJNA358009", "8500", "195", "3.705479", "7.22568405", "Verrucomicrobiota bacterium", "2026799", "Bacteria", "Bacteria", "231", "2.02e-56", "", "NTclustered", "gi|2916415364|gb|CP170459.1|", "2026799", "g8431", "i0", "88.83", "9.21538461538461", "188", "21", "96", "0", "1", "188", "2576558", "2576371", "MAG: Verrucomicrobiota bacterium isolate tig00002468 chromosome, complete genome", "blastn", "1797", "231", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"], [31275504, "PRJNA358009_P_NODE_12675_length_168_cov_3.016807_g12606_i0", "PRJNA358009", "12675", "168", "3.016807", "5.06823576", "Opitutaceae bacterium", "2006848", "Bacteria", "Bacteria", "68.9", "7.58e-12", "", "NR", "HVS52988.1", "2006848", "g12606", "i0", "59.6", "1.83928571428571", "52", "20", "92.9", "1", "3", "158", "253", "303", "HVS52988.1 hypothetical protein [Opitutaceae bacterium]", "diamond", "309", "68.9", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Opitutia", "Opitutales", "Opitutaceae", null, "Opitutaceae bacterium"]], "truncated": false, "filtered_table_rows_count": 13, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_phylum\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA358009", "p1": "Verrucomicrobiota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA358009&tax_phylum=Verrucomicrobiota", "results": [{"value": "PRJNA358009", "label": "PRJNA358009", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_phylum=Verrucomicrobiota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA358009&tax_phylum=Verrucomicrobiota", "results": [{"value": "blastn", "label": "blastn", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA358009&tax_phylum=Verrucomicrobiota&analysis=blastn", "selected": false}, {"value": "diamond", "label": "diamond", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA358009&tax_phylum=Verrucomicrobiota&analysis=diamond", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA358009&tax_phylum=Verrucomicrobiota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA358009&tax_phylum=Verrucomicrobiota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA358009&tax_phylum=Verrucomicrobiota", "results": [{"value": "PVC group", "label": "PVC group", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA358009&tax_phylum=Verrucomicrobiota&tax_clade=PVC+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA358009&tax_phylum=Verrucomicrobiota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA358009&tax_phylum=Verrucomicrobiota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA358009&tax_phylum=Verrucomicrobiota", "results": [{"value": "Verrucomicrobiota", "label": "Verrucomicrobiota", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA358009", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 175.2074750038446}