{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA340009\" and tax_phylum = \"Chlorobiota\"", "rows": [[2942497, "PRJNA340009_P_NODE_14703_length_308_cov_6.633205_g14396_i0", "PRJNA340009", "14703", "308", "6.633205", "20.4302714", "Chlorobiota bacterium", "2268192", "Bacteria", "Bacteria", "549", "8.359999999999996e-152", "", "NTclustered", "gi|1958119998|gb|CP065014.1|", "2268192", "g14396", "i0", "99.34", "0.983766233766234", "303", "2", "98", "0", "1", "303", "1946528", "1946830", "MAG: Chlorobiota bacterium isolate Ribe_18-Q3-R11-54_MAXAC.096_cln chromosome, complete genome", "blastn", "303", "549", "1", "Bacteria", "FCB group", "Pseudomonadati", "Chlorobiota", null, null, null, null, "Chlorobiota bacterium"], [4219377, "PRJNA340009_P_NODE_35224_length_212_cov_2.429448_g34917_i0", "PRJNA340009", "35224", "212", "2.429448", "5.15042976", "Chloroherpeton thalassium", "100716", "Bacteria", "Bacteria", "54.7", "0.005", "", "NTclustered", "gi|193087197|gb|CP001100.1|", "517418", "g34917", "i0", "87.5", "0.358490566037736", "48", "4", "23", "2", "59", "106", "1577615", "1577570", "Chloroherpeton thalassium ATCC 35110, complete genome", "blastn", "76", "54.7", "1", "Bacteria", "FCB group", "Pseudomonadati", "Chlorobiota", "Chlorobiia", "Chlorobiales", "Chloroherpetonaceae", "Chloroherpeton", "Chloroherpeton thalassium"], [6769669, "PRJNA340009_P_NODE_29866_length_227_cov_7.775281_g29559_i0", "PRJNA340009", "29866", "227", "7.775281", "17.64988787", "Chlorobiota bacterium", "2268192", "Bacteria", "Bacteria", "403", "4.85e-108", "", "NTclustered", "gi|1958119998|gb|CP065014.1|", "2268192", "g29559", "i0", "99.55", "0.977973568281938", "222", "0", "97", "1", "1", "221", "3056388", "3056609", "MAG: Chlorobiota bacterium isolate Ribe_18-Q3-R11-54_MAXAC.096_cln chromosome, complete genome", "blastn", "222", "403", "1", "Bacteria", "FCB group", "Pseudomonadati", "Chlorobiota", null, null, null, null, "Chlorobiota bacterium"], [27990843, "PRJNA340009_P_NODE_66985_length_165_cov_0.879310_g66678_i0", "PRJNA340009", "66985", "165", "0.87931", "1.4508615", "Chlorobium sp.", "1095", "Bacteria", "Bacteria", "60.1", "1.01e-8", "", "NR", "MBV5330610.1", "1095", "g66678", "i0", "60.8", "3.76363636363636", "51", "20", "92.7", "0", "1", "153", "127", "177", "MBV5330610.1 hypothetical protein [Chlorobium sp.]", "diamond", "621", "60.1", "1", "Bacteria", "FCB group", "Pseudomonadati", "Chlorobiota", "Chlorobiia", "Chlorobiales", "Chlorobiaceae", "Chlorobium", "Chlorobium sp."], [28906137, "PRJNA340009_P_NODE_69328_length_164_cov_0.886957_g69021_i0", "PRJNA340009", "69328", "164", "0.886957", "1.45460948", "Chlorobiales bacterium", "2723030", "Bacteria", "Bacteria", "57.8", "5.76e-8", "", "NR", "MBC8044077.1", "2723030", "g69021", "i0", "51.9", "0.98780487804878", "54", "26", "98.8", "0", "163", "2", "19", "72", "MBC8044077.1 tetratricopeptide repeat protein [Chlorobiales bacterium]", "diamond", "162", "57.8", "1", "Bacteria", "FCB group", "Pseudomonadati", "Chlorobiota", "Chlorobiia", "Chlorobiales", null, null, "Chlorobiales bacterium"], [29663759, "PRJNA340009_P_NODE_64050_length_166_cov_1.264957_g63743_i0", "PRJNA340009", "64050", "166", "1.264957", "2.09982862", "Chloroherpetonaceae bacterium", "2969135", "Bacteria", "Bacteria", "56.2", "7.06e-8", "", "NR", "MEN6512265.1", "2969135", "g63743", "i0", "66.7", "0.650602409638554", "36", "12", "65.1", "0", "48", "155", "47", "82", "MEN6512265.1 hypothetical protein [Chloroherpetonaceae bacterium]", "diamond", "108", "56.2", "1", "Bacteria", "FCB group", "Pseudomonadati", "Chlorobiota", "Chlorobiia", "Chlorobiales", "Chloroherpetonaceae", null, "Chloroherpetonaceae bacterium"], [30200878, "PRJNA340009_P_NODE_72492_length_163_cov_0.894737_g72185_i0", "PRJNA340009", "72492", "163", "0.894737", "1.45842131", "Chlorobiota bacterium", "2268192", "Bacteria", "Bacteria", "46.6", "5.39e-4", "", "NR", "MFN3196289.1", "2268192", "g72185", "i0", "44.7", "0.865030674846626", "47", "26", "86.5", "0", "21", "161", "242", "288", "MFN3196289.1 hypothetical protein [Chlorobiota bacterium]", "diamond", "141", "46.6", "1", "Bacteria", "FCB group", "Pseudomonadati", "Chlorobiota", null, null, null, null, "Chlorobiota bacterium"], [30376708, "PRJNA340009_P_NODE_28392_length_232_cov_3.874317_g28085_i0", "PRJNA340009", "28392", "232", "3.874317", "8.98841544", "Bacteria", "2", "Bacteria", "Bacteria", "140", "3.05e-38", "", "NR", "MEI8103065.1", "1095", "g28085", "i0", "90.8", "1.96551724137931", "76", "7", "98.3", "0", "4", "231", "108", "183", "MEI8103065.1 IS3 family transposase [Chlorobium sp.]", "diamond", "456", "140", "1", "Bacteria", "FCB group", "Pseudomonadati", "Chlorobiota", "Chlorobiia", "Chlorobiales", "Chlorobiaceae", "Chlorobium", "Chlorobium sp."], [32305258, "PRJNA340009_P_NODE_54759_length_176_cov_2.188976_g54452_i0", "PRJNA340009", "54759", "176", "2.188976", "3.85259776", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "65.1", "3.53e-11", "", "NR", "MEI8103116.1", "1095", "g54452", "i0", "56.9", "1.97727272727273", "58", "25", "98.9", "0", "175", "2", "27", "84", "MEI8103116.1 helix-turn-helix domain-containing protein [Chlorobium sp.]", "diamond", "348", "65.5", "0.993893129770992", "Bacteria", "FCB group", "Pseudomonadati", "Chlorobiota", "Chlorobiia", "Chlorobiales", "Chlorobiaceae", "Chlorobium", "Chlorobium sp."], [32446113, "PRJNA340009_P_NODE_1519_length_776_cov_3.337001_g1257_i0", "PRJNA340009", "1519", "776", "3.337001", "25.89512776", "Chlorobium sp.", "1095", "Bacteria", "Bacteria", "402", "1.32e-137", "", "NR", "MEI8103065.1", "1095", "g1257", "i0", "87.7", "2.48582474226804", "219", "27", "84.7", "0", "775", "119", "176", "394", "MEI8103065.1 IS3 family transposase [Chlorobium sp.]", "diamond", "1929", "402", "1", "Bacteria", "FCB group", "Pseudomonadati", "Chlorobiota", "Chlorobiia", "Chlorobiales", "Chlorobiaceae", "Chlorobium", "Chlorobium sp."], [32778376, "PRJNA340009_P_NODE_44900_length_191_cov_4.295775_g44593_i0", "PRJNA340009", "44900", "191", "4.295775", "8.20493025", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "80.5", "9.25e-16", "", "NR", "KER10942.1", "1519464", "g44593", "i0", "63.3", "12.0785340314136", "60", "22", "94.2", "0", "7", "186", "534", "593", "KER10942.1 MAG: aspartate kinase [[Candidatus Thermochlorobacteriaceae] bacterium GBChlB]", "diamond", "2307", "81.3", "0.990159901599016", "Bacteria", "FCB group", "Pseudomonadati", "Chlorobiota", "Chlorobiia", "Chlorobiales", "Chloroherpetonaceae", null, "[Candidatus Thermochlorobacteriaceae] bacterium GBChlB"]], "truncated": false, "filtered_table_rows_count": 11, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_phylum\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA340009", "p1": "Chlorobiota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA340009&tax_phylum=Chlorobiota", "results": [{"value": "PRJNA340009", "label": "PRJNA340009", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_phylum=Chlorobiota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA340009&tax_phylum=Chlorobiota", "results": [{"value": "diamond", "label": "diamond", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA340009&tax_phylum=Chlorobiota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA340009&tax_phylum=Chlorobiota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA340009&tax_phylum=Chlorobiota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA340009&tax_phylum=Chlorobiota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA340009&tax_phylum=Chlorobiota", "results": [{"value": "FCB group", "label": "FCB group", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA340009&tax_phylum=Chlorobiota&tax_clade=FCB+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA340009&tax_phylum=Chlorobiota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA340009&tax_phylum=Chlorobiota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA340009&tax_phylum=Chlorobiota", "results": [{"value": "Chlorobiota", "label": "Chlorobiota", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA340009", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 351.2740330043016}