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"g473420", "i0", "47.4", "0.754966887417219", "38", "20", "75.5", "0", "8", "121", "1", "38", "GAA6820949.1 hypothetical protein Kyoto200A_3790 [Helicobacter pylori]", "diamond", "114", "42.7", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [28544848, "PRJNA316313_P_NODE_95227_length_209_cov_3.651163_g93841_i0", "PRJNA316313", "95227", "209", "3.651163", "7.63093067", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "58.5", "2.06e-9", "", "NR", "GAA6953502.1", "210", "g93841", "i0", "70.6", "2.49760765550239", "34", "10", "48.8", "0", "175", "74", "13", "46", "GAA6953502.1 hypothetical protein Kyoto211A_0700 [Helicobacter pylori]", "diamond", "522", "58.5", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [28653589, 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"NR", "WP_118887296.1", "1278212", "g227424", "i0", "83.3", "0.770053475935829", "24", "4", "38.5", "0", "74", "3", "248", "271", "WP_118887296.1 molybdopterin molybdotransferase MoeA [Arcobacter suis]", "diamond", "144", "45.1", "0.991130820399113", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Arcobacteraceae", "Arcobacter", "Arcobacter suis"], [29569104, "PRJNA316313_P_NODE_154750_length_187_cov_4.493333_g153364_i0", "PRJNA316313", "154750", "187", "4.493333", "8.40253271", "uncultured Campylobacter sp.", "218934", "Bacteria", "Bacteria", "82", "4.53e-17", "", "NR", "WP_297573340.1", "218934", "g153364", "i0", "72.7", "1.05882352941176", "66", "13", "97.9", "1", "3", "185", "112", "177", "WP_297573340.1 imidazole glycerol phosphate synthase subunit HisF [uncultured Campylobacter sp.]", "diamond", "198", "82", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", 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"GAA9176257.1 hypothetical protein Kyoto193A_0400 [Helicobacter pylori]", "diamond", "432", "60.5", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [30881713, "PRJNA316313_P_NODE_383394_length_158_cov_6.123967_g382008_i0", "PRJNA316313", "383394", "158", "6.123967", "9.67586786", "root", "1", "Root_unresolved", "Root_unresolved", "50.1", "2.76e-5", "", "NR", "GAA9037473.1", "210", "g382008", "i0", "50", "6.85443037974684", "44", "22", "83.5", "0", "1", "132", "186", "229", "GAA9037473.1 hypothetical protein Kyoto184A_00560 [Helicobacter pylori]", "diamond", "1083", "50.4", "0.994047619047619", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [31306821, "PRJNA316313_P_NODE_367095_length_167_cov_19.738462_g365709_i0", "PRJNA316313", "367095", "167", "19.738462", "32.96323154", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "40", "0.0119", "", "NR", "GAA6916578.1", "210", "g365709", "i0", "69.6", "0.413173652694611", "23", "7", "41.3", "0", "97", "165", "8", "30", "GAA6916578.1 hypothetical protein Kyoto207A_3550 [Helicobacter pylori]", "diamond", "69", "40", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [31496781, "PRJNA316313_P_NODE_115896_length_194_cov_4.694268_g114510_i0", "PRJNA316313", "115896", "194", "4.694268", "9.10687992", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "47", "5.98e-5", "", "NR", "GAA9192772.1", "210", "g114510", "i0", "86.4", "0.34020618556701", "22", "3", "34", "0", "24", "89", "2", "23", "GAA9192772.1 hypothetical protein Kyoto193A_3750 [Helicobacter pylori]", "diamond", "66", "47", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [31496853, "PRJNA316313_P_NODE_48836_length_263_cov_5.088496_g47451_i0", "PRJNA316313", "48836", "263", "5.088496", "13.38274448", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "42.7", "0.00313", "", "NR", "GAA6843347.1", "210", "g47451", "i0", "100", "0.193916349809886", "17", "0", "19.4", "0", "65", "115", "1", "17", "GAA6843347.1 hypothetical protein Kyoto200A_5030 [Helicobacter pylori]", "diamond", "51", "42.7", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [31861776, "PRJNA316313_P_NODE_261597_length_187_cov_2.706667_g260211_i0", "PRJNA316313", "261597", "187", "2.706667", "5.06146729", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "55.8", "3.37e-7", "", "NR", "GAA8965433.1", "210", "g260211", "i0", "100", "1.18716577540107", "24", "0", "38.5", "0", "184", "113", "33", "56", "GAA8965433.1 hypothetical protein HpSP79_07860 [Helicobacter pylori]", "diamond", "222", "56.2", "0.99288256227758", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [31893562, "PRJNA316313_P_NODE_483657_length_150_cov_5.398230_g482271_i0", "PRJNA316313", "483657", "150", "5.39823", "8.097345", "root", "1", "Root_unresolved", "Root_unresolved", "43.1", "0.00422", "", "NR", "GAA9396157.1", "210", "g482271", "i0", "52.6", "2.28", "38", "18", "76", "0", "117", "4", "71", "108", "GAA9396157.1 hypothetical protein BTM418_15410 [Helicobacter pylori]", "diamond", "342", "43.1", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [32065943, "PRJNA316313_P_NODE_337158_length_185_cov_4.378378_g335772_i0", "PRJNA316313", "337158", "185", "4.378378", "8.0999993", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "42", "0.0052", "", "NR", "GAA9176789.1", "210", "g335772", "i0", "70.8", "0.778378378378378", "24", "7", "38.9", "0", "184", "113", "8", "31", "GAA9176789.1 hypothetical protein Kyoto193A_1110 [Helicobacter pylori]", "diamond", "144", "42", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [32256320, "PRJNA316313_P_NODE_99738_length_205_cov_8.125000_g98352_i0", "PRJNA316313", "99738", "205", "8.125", "16.65625", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "39.7", "0.0399", "", "NR", "GAA8930966.1", "210", "g98352", "i0", "41.7", "0.702439024390244", "48", "16", "70.2", "2", "60", "203", "1", "36", "GAA8930966.1 hypothetical protein Kyoto166A_4300 [Helicobacter pylori]", "diamond", "144", "39.7", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [32336760, "PRJNA316313_P_NODE_377259_length_162_cov_2.200000_g375873_i0", "PRJNA316313", "377259", "162", "2.2", "3.564", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "40", "0.0134", "", "NR", "GAA6993167.1", "210", "g375873", "i0", "57.6", "1.98148148148148", "33", "9", "61.1", "1", "3", "101", "1", "28", "GAA6993167.1 hypothetical protein Kyoto211A_4860 [Helicobacter pylori]", "diamond", "321", "40", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [32382444, "PRJNA316313_P_NODE_216459_length_187_cov_3.180000_g215073_i0", "PRJNA316313", "216459", "187", "3.18", "5.9466", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "40", "0.0362", "", "NR", "GAA6889013.1", "210", "g215073", "i0", "45.1", "0.818181818181818", "51", "28", "81.8", "0", "153", "1", "25", "75", "GAA6889013.1 hypothetical protein Kyoto206A_5310 [Helicobacter pylori]", "diamond", "153", "40", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [32382489, "PRJNA316313_P_NODE_394479_length_153_cov_4.000000_g393093_i0", "PRJNA316313", "394479", "153", "4", "6.12", "Campylobacter jejuni", "197", "Bacteria", "Bacteria", "46.6", "4.6e-4", "", "NR", "NHL33342.1", "197", "g393093", "i0", "38.8", "1.92156862745098", "49", "29", "96.1", "1", "152", "6", "119", "166", "NHL33342.1 hypothetical protein [Campylobacter jejuni]", "diamond", "294", "46.6", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter jejuni"], [32572449, "PRJNA316313_P_NODE_102919_length_203_cov_4.373494_g101533_i0", "PRJNA316313", "102919", "203", "4.373494", "8.87819282", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "57.4", "3.25e-9", "", "NR", "GAA6795254.1", "210", "g101533", "i0", "65.7", "1.03448275862069", "35", "12", "51.7", "0", "115", "11", "4", "38", "GAA6795254.1 hypothetical protein Kyoto200A_0170 [Helicobacter pylori]", "diamond", "210", "57.4", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [32603788, "PRJNA316313_P_NODE_385540_length_157_cov_4.966667_g384154_i0", "PRJNA316313", "385540", "157", "4.966667", "7.79766719", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "40.8", "0.00525", "", "NR", "GAA6916578.1", "210", "g384154", "i0", "85", "0.382165605095541", "20", "3", "38.2", "0", "2", "61", "8", "27", "GAA6916578.1 hypothetical protein Kyoto207A_3550 [Helicobacter pylori]", "diamond", "60", "40.8", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"]], "truncated": false, "filtered_table_rows_count": 54, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_kingdom\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA316313", "p1": "Pseudomonadati", "p2": "Campylobacterota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA316313&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [{"value": "PRJNA316313", "label": "PRJNA316313", "count": 54, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA316313&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [{"value": "diamond", "label": "diamond", "count": 31, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA316313&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 23, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA316313&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA316313&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 54, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA316313&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA316313&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA316313&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 54, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA316313&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA316313&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [{"value": "Campylobacterota", "label": "Campylobacterota", "count": 54, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA316313&tax_kingdom=Pseudomonadati", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 280.39911599989864}