{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA283169\", tax_kingdom = \"Pseudomonadati\" and tax_phylum = \"Campylobacterota\"", "rows": [[371794, "PRJNA283169_P_NODE_5501_length_182_cov_1.533835_g5438_i0", "PRJNA283169", "5501", "182", "1.533835", "2.7915797", "Arcobacteraceae bacterium", "2808971", "Bacteria", "Bacteria", "147", "6.899999999999999e-31", "", "NTclustered", "gi|2621713474|emb|OY771505.1|", "2808971", "g5438", "i0", "84.211", "78.6153846153846", "152", "23", "84", "1", "31", "182", "79102", "79252", "MAG: Arcobacteraceae bacterium isolate 2add6294-6f5d-422d-8d5e-cb49cf879a66 genome assembly, chromosome: 1", "blastn", "14308", "147", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Arcobacteraceae", null, "Arcobacteraceae bacterium"], [2922468, "PRJNA283169_P_NODE_8163_length_162_cov_0.893805_g8100_i0", "PRJNA283169", "8163", "162", "0.893805", "1.4479641", "Helicobacter sp. MIT 99-5507", "152489", "Bacteria", "Bacteria", "110", "7.89e-20", "", "NTclustered", "gi|50957179|gb|AY596264.1|", "152489", "g8100", "i0", "91.25", "0.493827160493827", "80", "7", "49", "0", "56", "135", "207", "128", "Helicobacter sp. MIT 99-5507 23S ribosomal RNA gene, partial sequence", "blastn", "80", "110", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter sp. MIT 99-5507"], [15674453, "PRJNA283169_P_NODE_1033_length_387_cov_1.047337_g971_i0", "PRJNA283169", "1033", "387", "1.047337", "4.05319419", "Campylobacterales bacterium", "2268180", "Bacteria", "Bacteria", "246", "5.64e-79", "", "NR", "MDD3467355.1", "2268180", "g971", "i0", "94.6", "3", "129", "7", "100", "0", "387", "1", "107", "235", "MDD3467355.1 aspartate-semialdehyde dehydrogenase [Campylobacterales bacterium]", "diamond", "1161", "246", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", null, null, "Campylobacterales bacterium"], [32666256, "PRJNA283169_P_NODE_7480_length_164_cov_0.913043_g7417_i0", "PRJNA283169", "7480", "164", "0.913043", "1.49739052", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "64.3", "7.34e-12", "", "NR", "GAA8798126.1", "210", "g7417", "i0", "100", "0.49390243902439", "27", "0", "49.4", "0", "2", "82", "6", "32", "GAA8798126.1 hypothetical protein Kyoto149A_1450 [Helicobacter pylori]", "diamond", "81", "64.3", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [32823780, "PRJNA283169_P_NODE_3840_length_213_cov_1.243902_g3777_i0", "PRJNA283169", "3840", "213", "1.243902", "2.64951126", "Sulfuricurvum sp. RIFCSPHIGHO2_12_FULL_44_8", "1802243", "Bacteria", "Bacteria", "125", "3.77e-33", "", "NR", "OHD85708.1", "1802243", "g3777", "i0", "81.4", "0.985915492957746", "70", "13", "98.6", "0", "211", "2", "65", "134", "OHD85708.1 MAG: hypothetical protein A3J39_05920 [Sulfuricurvum sp. RIFCSPHIGHO2_12_FULL_44_8]", "diamond", "210", "125", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Sulfurimonadaceae", "Sulfuricurvum", "Sulfuricurvum sp. RIFCSPHIGHO2_12_FULL_44_8"]], "truncated": false, "filtered_table_rows_count": 5, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_kingdom\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA283169", "p1": "Pseudomonadati", "p2": "Campylobacterota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA283169&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [{"value": "PRJNA283169", "label": "PRJNA283169", "count": 5, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA283169&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [{"value": "diamond", "label": "diamond", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA283169&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA283169&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA283169&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 5, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA283169&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA283169&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA283169&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 5, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA283169&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA283169&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [{"value": "Campylobacterota", "label": "Campylobacterota", "count": 5, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA283169&tax_kingdom=Pseudomonadati", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 426.1479999986477}