{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA278119\", tax_clade = \"PVC group\" and tax_phylum = \"Chlamydiota\"", "rows": [[2921960, "PRJNA278119_P_NODE_30443_length_179_cov_2.761538_g30194_i0", "PRJNA278119", "30443", "179", "2.761538", "4.94315302", "uncultured Parachlamydiaceae bacterium", "464461", "Bacteria", "Bacteria", "243", "8.379999999999999e-60", "", "NTclustered", "gi|2874253811|emb|OY969795.1|", "464461", "g30194", "i0", "92.899", "182.262569832402", "169", "9", "93", "3", "1", "167", "2059353", "2059520", "MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1", "blastn", "32625", "243", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", null, "uncultured Parachlamydiaceae bacterium"], [2922258, "PRJNA278119_P_NODE_8063_length_418_cov_1.268293_g7816_i0", "PRJNA278119", "8063", "418", "1.268293", "5.30146474", "Waddlia malaysiensis", "219016", "Bacteria", "Bacteria", "431", "4.419999999999998e-116", "", "NTclustered", "gi|27903501|gb|AY184804.1|", "219016", "g7816", "i0", "85.681", "202.167464114833", "426", "42", "100", "17", "1", "418", "1772", "2186", "Waddlia sp. G817 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence", "blastn", "84506", "431", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Waddliaceae", "Waddlia", "Waddlia malaysiensis"], [4198120, "PRJNA278119_P_NODE_11324_length_343_cov_2.693878_g11076_i0", "PRJNA278119", "11324", "343", "2.693878", "9.24000154", "Candidatus Protochlamydia naegleriophila", "389348", "Bacteria", "Bacteria", "617", "2.55e-172", "", "NTclustered", "gi|971146634|emb|LN879502.1|", "389348", "g11076", "i0", "99.125", "101.661807580175", "343", "3", "100", "0", "1", "343", "1249089", "1249431", "Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK", "blastn", "34870", "617", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", "Candidatus Protochlamydia", "Candidatus Protochlamydia naegleriophila"], [10575242, "PRJNA278119_P_NODE_28849_length_184_cov_1.540741_g28600_i0", "PRJNA278119", "28849", "184", "1.540741", "2.83496344", "uncultured Parachlamydiaceae bacterium", "464461", "Bacteria", "Bacteria", "233", "5.22e-57", "", "NTclustered", "gi|2874253811|emb|OY969795.1|", "464461", "g28600", "i0", "91.279", "268.260869565217", "172", "13", "99", "2", "14", "184", "653752", "653582", "MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1", "blastn", "49360", "233", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", null, "uncultured Parachlamydiaceae bacterium"], [11850171, "PRJNA278119_P_NODE_5890_length_491_cov_3.665158_g5644_i0", "PRJNA278119", "5890", "491", "3.665158", "17.99592578", "Candidatus Protochlamydia naegleriophila", "389348", "Bacteria", "Bacteria", "902", "0", "", "NTclustered", "gi|971146634|emb|LN879502.1|", "389348", "g5644", "i0", "99.796", "115.399185336049", "491", "1", "100", "0", "1", "491", "1251589", "1251099", "Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK", "blastn", "56661", "902", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", "Candidatus Protochlamydia", "Candidatus Protochlamydia naegleriophila"], [28337402, "PRJNA278119_P_NODE_38526_length_167_cov_0.881356_g38277_i0", "PRJNA278119", "38526", "167", "0.881356", "1.47186452", "Chlamydia sp. 32-24", "1895742", "Bacteria", "Bacteria", "72.8", "2.64e-13", "", "NR", "OJU81359.1", "1895742", "g38277", "i0", "100", "0.610778443113772", "34", "0", "61.1", "0", "166", "65", "323", "356", "OJU81359.1 MAG: hypothetical protein BGO10_07015 [Chlamydia sp. 32-24]", "diamond", "102", "72.8", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", "Chlamydiaceae", "Chlamydia", "Chlamydia sp. 32-24"], [31211033, "PRJNA278119_P_NODE_1895_length_897_cov_3.831368_g1697_i0", "PRJNA278119", "1895", "897", "3.831368", "34.36737096", "Chlamydiales bacterium STE3", "1910938", "Bacteria", "Bacteria", "110", "8.289999999999999e-23", "", "NR", "KAF3362306.1", "1910938", "g1697", "i0", "35.9", "2.35117056856187", "167", "94", "53.2", "6", "869", "393", "561", "722", "KAF3362306.1 hypothetical protein PHSC3_001135 [Chlamydiales bacterium STE3]", "diamond", "2109", "110", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "Chlamydiales bacterium STE3"], [31401498, "PRJNA278119_P_NODE_16016_length_266_cov_0.917051_g15767_i0", "PRJNA278119", "16016", "266", "0.917051", "2.43935566", "Parachlamydiaceae bacterium", "2052176", "Bacteria", "Bacteria", "60.5", "2.79e-8", "", "NR", "MBA3721977.1", "2052176", "g15767", "i0", "43.6", "0.879699248120301", "78", "42", "85.7", "1", "1", "228", "311", "388", "MBA3721977.1 DUF4116 domain-containing protein [Parachlamydiaceae bacterium]", "diamond", "234", "60.5", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", null, "Parachlamydiaceae bacterium"], [32508853, "PRJNA278119_P_NODE_42079_length_165_cov_0.896552_g41830_i0", "PRJNA278119", "42079", "165", "0.896552", "1.4793108", "Candidatus Protochlamydia sp.", "2687294", "Bacteria", "Bacteria", "77", "1.63e-16", "", "NR", "MBA2368373.1", "2687294", "g41830", "i0", "71.7", "1.67272727272727", "46", "13", "83.6", "0", "28", "165", "1", "46", "MBA2368373.1 type II toxin-antitoxin system PemK/MazF family toxin [Candidatus Protochlamydia sp.]", "diamond", "276", "77", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", "Candidatus Protochlamydia", "Candidatus Protochlamydia sp."]], "truncated": false, "filtered_table_rows_count": 9, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA278119", "p1": "PVC group", "p2": "Chlamydiota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA278119&tax_clade=PVC+group&tax_phylum=Chlamydiota", "results": [{"value": "PRJNA278119", "label": "PRJNA278119", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=PVC+group&tax_phylum=Chlamydiota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA278119&tax_clade=PVC+group&tax_phylum=Chlamydiota", "results": [{"value": "blastn", "label": "blastn", "count": 5, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA278119&tax_clade=PVC+group&tax_phylum=Chlamydiota&analysis=blastn", "selected": false}, {"value": "diamond", "label": "diamond", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA278119&tax_clade=PVC+group&tax_phylum=Chlamydiota&analysis=diamond", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA278119&tax_clade=PVC+group&tax_phylum=Chlamydiota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA278119&tax_clade=PVC+group&tax_phylum=Chlamydiota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA278119&tax_clade=PVC+group&tax_phylum=Chlamydiota", "results": [{"value": "PVC group", "label": "PVC group", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA278119&tax_phylum=Chlamydiota", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA278119&tax_clade=PVC+group&tax_phylum=Chlamydiota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA278119&tax_clade=PVC+group&tax_phylum=Chlamydiota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA278119&tax_clade=PVC+group&tax_phylum=Chlamydiota", "results": [{"value": "Chlamydiota", "label": "Chlamydiota", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA278119&tax_clade=PVC+group", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 319.4472820032388}