{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA177642\" and tax_phylum = \"Gemmatimonadota\"", "rows": [[4192613, "PRJNA177642_P_NODE_18124_length_164_cov_1.051852_g16899_i0", "PRJNA177642", "18124", "164", "1.051852", "1.72503728", "Bacteria", "2", "Bacteria", "Bacteria", "100", "1.3799999999999998e-23", "", "NR", "PYO67931.1", "2026742", "g16899", "i0", "90.6", "3.93292682926829", "53", "5", "97", "0", "163", "5", "228", "280", "PYO67931.1 MAG: threonine synthase [Gemmatimonadota bacterium]", "diamond", "645", "100", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadota bacterium"], [10569522, "PRJNA177642_P_NODE_15769_length_181_cov_1.684211_g14544_i0", "PRJNA177642", "15769", "181", "1.684211", "3.04842191", "Gemmatimonadota bacterium", "2026742", "Bacteria", "Bacteria", "115", "2.8e-30", "", "NR", "MBI1968209.1", "2026742", "g14544", "i0", "86.7", "0.994475138121547", "60", "8", "99.4", "0", "1", "180", "48", "107", "MBI1968209.1 GTP cyclohydrolase I FolE [Gemmatimonadota bacterium]", "diamond", "180", "115", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadota bacterium"], [15668322, "PRJNA177642_P_NODE_17213_length_168_cov_1.028777_g15988_i0", "PRJNA177642", "17213", "168", "1.028777", "1.72834536", "Gemmatimonas phototrophica", "1379270", "Bacteria", "Bacteria", "213", "6.12e-51", "", "NTclustered", "gi|1015602748|gb|CP011454.1|", "1379270", "g15988", "i0", "89.759", "39.1011904761905", "166", "17", "99", "0", "3", "168", "2077406", "2077571", "Gemmatimonas phototrophica strain AP64, complete genome", "blastn", "6569", "213", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatimonas", "Gemmatimonas phototrophica"], [26662114, "PRJNA177642_P_NODE_16841_length_170_cov_1.000000_g15616_i0", "PRJNA177642", "16841", "170", "1", "1.7", "Gemmatimonadales bacterium", "2448054", "Bacteria", "Bacteria", "84.7", "2.16e-17", "", "NR", "HYT70906.1", "2448054", "g15616", "i0", "74.5", "6.74117647058824", "55", "14", "97.1", "0", "4", "168", "118", "172", "HYT70906.1 OmpA family protein [Gemmatimonadales bacterium]", "diamond", "1146", "84.7", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "Gemmatimonadales bacterium"], [27912773, "PRJNA177642_P_NODE_17465_length_167_cov_1.007246_g16240_i0", "PRJNA177642", "17465", "167", "1.007246", "1.68210082", "Bacteria", "2", "Bacteria", "Bacteria", "92.8", "3.06e-20", "", "NR", "PYP53242.1", "2026742", "g16240", "i0", "78.2", "4.94011976047904", "55", "12", "98.8", "0", "2", "166", "624", "678", "PYP53242.1 MAG: SusC/RagA family TonB-linked outer membrane protein [Gemmatimonadota bacterium]", "diamond", "825", "92.8", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadota bacterium"], [28779128, "PRJNA177642_P_NODE_18427_length_163_cov_1.029851_g17202_i0", "PRJNA177642", "18427", "163", "1.029851", "1.67865713", "Gemmatimonadales bacterium", "2448054", "Bacteria", "Bacteria", "95.1", "2.5900000000000003e-21", "", "NR", "MBA3759617.1", "2448054", "g17202", "i0", "81.1", "11.6503067484663", "53", "10", "97.5", "0", "160", "2", "135", "187", "MBA3759617.1 hypothetical protein [Gemmatimonadales bacterium]", "diamond", "1899", "95.1", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "Gemmatimonadales bacterium"], [30168529, "PRJNA177642_P_NODE_17512_length_166_cov_2.036496_g16287_i0", "PRJNA177642", "17512", "166", "2.036496", "3.38058336", "Gemmatimonadales bacterium", "2448054", "Bacteria", "Bacteria", "91.7", "7.44e-20", "", "NR", "HEY9383919.1", "2448054", "g16287", "i0", "83.3", "4.87951807228916", "54", "9", "97.6", "0", "3", "164", "177", "230", "HEY9383919.1 tetratricopeptide repeat protein [Gemmatimonadales bacterium]", "diamond", "810", "91.7", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "Gemmatimonadales bacterium"], [30534008, "PRJNA177642_P_NODE_17233_length_168_cov_1.014388_g16008_i0", "PRJNA177642", "17233", "168", "1.014388", "1.70417184", "Bacteria", "2", "Bacteria", "Bacteria", "99", "6.68e-24", "", "NR", "OLC03323.1", "1805196", "g16008", "i0", "89.1", "2.94642857142857", "55", "6", "98.2", "0", "2", "166", "88", "142", "OLC03323.1 MAG: hypothetical protein AUH45_06265 [Gemmatimonadetes bacterium 13_1_40CM_69_22]", "diamond", "495", "99", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadetes bacterium 13_1_40CM_69_22"]], "truncated": false, "filtered_table_rows_count": 8, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_phylum\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA177642", "p1": "Gemmatimonadota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA177642&tax_phylum=Gemmatimonadota", "results": [{"value": "PRJNA177642", "label": "PRJNA177642", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_phylum=Gemmatimonadota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA177642&tax_phylum=Gemmatimonadota", "results": [{"value": "diamond", "label": "diamond", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA177642&tax_phylum=Gemmatimonadota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA177642&tax_phylum=Gemmatimonadota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA177642&tax_phylum=Gemmatimonadota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA177642&tax_phylum=Gemmatimonadota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA177642&tax_phylum=Gemmatimonadota", "results": [{"value": "FCB group", "label": "FCB group", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA177642&tax_phylum=Gemmatimonadota&tax_clade=FCB+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA177642&tax_phylum=Gemmatimonadota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA177642&tax_phylum=Gemmatimonadota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA177642&tax_phylum=Gemmatimonadota", "results": [{"value": "Gemmatimonadota", "label": "Gemmatimonadota", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA177642", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 239.51450400090835}