{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA1262902\", tax_kingdom = \"Pseudomonadati\" and tax_phylum = \"Campylobacterota\"", "rows": [[13807418, "PRJNA1262902_P_NODE_12471_length_240_cov_2.502994_g12429_i0", "PRJNA1262902", "12471", "240", "2.502994", "6.0071856", "Campylobacter", "194", "Bacteria", "Bacteria", "398", "2.4099999999999996e-106", "", "NTclustered", "gi|1207769205|gb|MF351718.1|", "199", "g12429", "i0", "100", "209.745833333333", "215", "0", "90", "0", "1", "215", "1495", "1281", "Campylobacter concisus strain H11O-S1 23S ribosomal RNA gene, partial sequence", "blastn", "50339", "398", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter concisus"], [26711605, "PRJNA1262902_P_NODE_11541_length_242_cov_1.710059_g11499_i0", "PRJNA1262902", "11541", "242", "1.710059", "4.13834278", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "57", "7.53e-9", "", "NR", "GAA9176257.1", "210", "g11499", "i0", "58", "1.32644628099174", "50", "21", "62", "0", "215", "66", "1", "50", "GAA9176257.1 hypothetical protein Kyoto193A_0400 [Helicobacter pylori]", "diamond", "321", "57", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [28481336, "PRJNA1262902_P_NODE_8066_length_250_cov_0.870056_g8024_i0", "PRJNA1262902", "8066", "250", "0.870056", "2.17514", "root", "1", "Root_unresolved", "Root_unresolved", "80.1", "2.93e-17", "", "NR", "WP_234446346.1", "196", "g8024", "i0", "71.2", "48.324", "66", "19", "79.2", "0", "2", "199", "14", "79", "WP_234446346.1 hypothetical protein, partial [Campylobacter fetus]", "diamond", "12081", "80.1", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter fetus"], [28684702, "PRJNA1262902_P_NODE_5947_length_266_cov_1.430052_g5905_i0", "PRJNA1262902", "5947", "266", "1.430052", "3.80393832", "Helicobacter muridarum", "216", "Bacteria", "Bacteria", "43.1", "0.0374", "", "NR", "WP_104692215.1", "216", "g5905", "i0", "46.5", "0.484962406015038", "43", "21", "46.2", "1", "180", "58", "84", "126", "WP_104692215.1 alpha-2-macroglobulin family protein [Helicobacter muridarum]", "diamond", "129", "43.1", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter muridarum"]], "truncated": false, "filtered_table_rows_count": 4, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_kingdom\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA1262902", "p1": "Pseudomonadati", "p2": "Campylobacterota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1262902&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [{"value": "PRJNA1262902", "label": "PRJNA1262902", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1262902&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [{"value": "diamond", "label": "diamond", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1262902&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1262902&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1262902&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1262902&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1262902&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1262902&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1262902&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1262902&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [{"value": "Campylobacterota", "label": "Campylobacterota", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1262902&tax_kingdom=Pseudomonadati", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 293.49252200336196}