{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA1247234\", tax_clade = \"FCB group\" and tax_phylum = \"Gemmatimonadota\"", "rows": [[10555657, "PRJNA1247234_P_NODE_28009_length_242_cov_0.923077_g27853_i0", "PRJNA1247234", "28009", "242", "0.923077", "2.23384634", "uncultured Gemmatimonadales bacterium", "412054", "Bacteria", "Bacteria", "169", "2.07e-37", "", "NTclustered", "gi|2874254163|emb|OY970395.1|", "412054", "g27853", "i0", "83.708", "0.735537190082645", "178", "29", "74", "0", "47", "224", "1435559", "1435382", "MAG: uncultured Gemmatimonadales bacterium isolate MFD05684.bin.c.1 genome assembly, chromosome: 1", "blastn", "178", "169", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "uncultured Gemmatimonadales bacterium"], [11830067, "PRJNA1247234_P_NODE_22610_length_250_cov_0.881356_g22454_i0", "PRJNA1247234", "22610", "250", "0.881356", "2.20339", "Longimicrobiales bacterium", "2910168", "Bacteria", "Bacteria", "143", "5.81e-39", "", "NR", "HEU5209272.1", "2910168", "g22454", "i0", "90.4", "1.992", "83", "8", "99.6", "0", "249", "1", "297", "379", "HEU5209272.1 P1 family peptidase [Longimicrobiales bacterium]", "diamond", "498", "143", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Longimicrobiia", "Longimicrobiales", null, null, "Longimicrobiales bacterium"], [11830110, "PRJNA1247234_P_NODE_24370_length_247_cov_0.896552_g24214_i0", "PRJNA1247234", "24370", "247", "0.896552", "2.21448344", "uncultured Gemmatimonadales bacterium", "412054", "Bacteria", "Bacteria", "255", "1.59e-63", "", "NTclustered", "gi|2874253728|emb|OY969570.1|", "412054", "g24214", "i0", "85.597", "5.54655870445344", "243", "35", "98", "0", "5", "247", "1742188", "1742430", "MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1", "blastn", "1370", "255", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "uncultured Gemmatimonadales bacterium"], [14380472, "PRJNA1247234_P_NODE_15932_length_283_cov_1.114286_g15776_i0", "PRJNA1247234", "15932", "283", "1.114286", "3.15342938", "uncultured Gemmatimonadales bacterium", "412054", "Bacteria", "Bacteria", "368", "2.28e-97", "", "NTclustered", "gi|2874254107|emb|OY970192.1|", "412054", "g15776", "i0", "90.141", "99.0388692579505", "284", "26", "100", "2", "1", "283", "4301894", "4302176", "MAG: uncultured Gemmatimonadales bacterium isolate MFD01721.bin.c.5 genome assembly, chromosome: 1", "blastn", "28028", "368", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "uncultured Gemmatimonadales bacterium"], [15654401, "PRJNA1247234_P_NODE_19353_length_258_cov_0.875676_g19197_i0", "PRJNA1247234", "19353", "258", "0.875676", "2.25924408", "uncultured Gemmatimonadales bacterium", "412054", "Bacteria", "Bacteria", "366", "7.38e-97", "", "NTclustered", "gi|2874253978|emb|OY970303.1|", "412054", "g19197", "i0", "93.173", "32.7209302325581", "249", "17", "100", "0", "1", "249", "1903236", "1903484", "MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1", "blastn", "8442", "366", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "uncultured Gemmatimonadales bacterium"], [19477506, "PRJNA1247234_P_NODE_20396_length_253_cov_0.866667_g20240_i0", "PRJNA1247234", "20396", "253", "0.866667", "2.19266751", "Gemmatimonadota bacterium", "2026742", "Bacteria", "Bacteria", "127", "9.619999999999999e-32", "", "NR", "RMH16308.1", "2026742", "g20240", "i0", "73.8", "0.99604743083004", "84", "22", "99.6", "0", "2", "253", "407", "490", "RMH16308.1 MAG: response regulator [Gemmatimonadota bacterium]", "diamond", "252", "127", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadota bacterium"], [19477516, "PRJNA1247234_P_NODE_21076_length_252_cov_0.871508_g20920_i0", "PRJNA1247234", "21076", "252", "0.871508", "2.19620016", "Gaopeijia maritima", "3119007", "Bacteria", "Bacteria", "180", "1e-40", "", "NTclustered", "gi|2716997671|gb|CP144380.1|", "3119007", "g20920", "i0", "84.239", "0.73015873015873", "184", "29", "73", "0", "69", "252", "4067285", "4067102", "Gaopeijia maritima strain DH-78 chromosome, complete genome", "blastn", "184", "180", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Longimicrobiia", "Gaopeijiales", "Gaopeijiaceae", "Gaopeijia", "Gaopeijia maritima"], [20753049, "PRJNA1247234_P_NODE_27057_length_243_cov_0.917647_g26901_i0", "PRJNA1247234", "27057", "243", "0.917647", "2.22988221", "Longimicrobiales bacterium", "2910168", "Bacteria", "Bacteria", "149", "3.31e-42", "", "NR", "HEU5210923.1", "2910168", "g26901", "i0", "92.6", "1.98765432098765", "81", "5", "98.8", "1", "241", "2", "37", "117", "HEU5210923.1 TIGR00730 family Rossman fold protein [Longimicrobiales bacterium]", "diamond", "483", "149", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Longimicrobiia", "Longimicrobiales", null, null, "Longimicrobiales bacterium"], [24577847, "PRJNA1247234_P_NODE_25800_length_245_cov_0.906977_g25644_i0", "PRJNA1247234", "25800", "245", "0.906977", "2.22209365", "Longimicrobiales bacterium", "2910168", "Bacteria", "Bacteria", "163", "3.45e-45", "", "NR", "HEU5209774.1", "2910168", "g25644", "i0", "92.6", "0.991836734693878", "81", "6", "99.2", "0", "245", "3", "210", "290", "HEU5209774.1 acetate--CoA ligase [Longimicrobiales bacterium]", "diamond", "243", "163", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Longimicrobiia", "Longimicrobiales", null, null, "Longimicrobiales bacterium"], [26598470, "PRJNA1247234_P_NODE_21721_length_251_cov_0.876404_g21565_i0", "PRJNA1247234", "21721", "251", "0.876404", "2.19977404", "Longimicrobiales bacterium", "2910168", "Bacteria", "Bacteria", "56.2", "1.29e-7", "", "NR", "HEU5209398.1", "2910168", "g21565", "i0", "82.4", "0.406374501992032", "34", "6", "40.6", "0", "149", "250", "1", "34", "HEU5209398.1 response regulator [Longimicrobiales bacterium]", "diamond", "102", "56.2", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Longimicrobiia", "Longimicrobiales", null, null, "Longimicrobiales bacterium"], [28273606, "PRJNA1247234_P_NODE_23826_length_248_cov_0.891429_g23670_i0", "PRJNA1247234", "23826", "248", "0.891429", "2.21074392", "Gemmatimonadales bacterium", "2448054", "Bacteria", "Bacteria", "162", "2.1e-46", "", "NR", "MBE0591343.1", "2448054", "g23670", "i0", "100", "0.991935483870968", "82", "0", "99.2", "0", "246", "1", "264", "345", "MBE0591343.1 fatty acid desaturase [Gemmatimonadales bacterium]", "diamond", "246", "162", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "Gemmatimonadales bacterium"], [29631110, "PRJNA1247234_P_NODE_21130_length_252_cov_0.871508_g20974_i0", "PRJNA1247234", "21130", "252", "0.871508", "2.19620016", "Gemmatimonadota bacterium", "2026742", "Bacteria", "Bacteria", "120", "5.6899999999999995e-30", "", "NR", "NNK62657.1", "2026742", "g20974", "i0", "71.6", "2.85714285714286", "81", "23", "96.4", "0", "251", "9", "148", "228", "NNK62657.1 insulinase family protein [Gemmatimonadota bacterium]", "diamond", "720", "120", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadota bacterium"], [32065034, "PRJNA1247234_P_NODE_25618_length_245_cov_0.906977_g25462_i0", "PRJNA1247234", "25618", "245", "0.906977", "2.22209365", "Gemmatimonadota bacterium", "2026742", "Bacteria", "Bacteria", "112", "4.95e-29", "", "NR", "NJD19204.1", "2026742", "g25462", "i0", "70", "2.93877551020408", "80", "24", "98", "0", "1", "240", "77", "156", "NJD19204.1 sodium-independent anion transporter [Gemmatimonadota bacterium]", "diamond", "720", "112", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadota bacterium"], [32350047, "PRJNA1247234_P_NODE_23779_length_248_cov_0.891429_g23623_i0", "PRJNA1247234", "23779", "248", "0.891429", "2.21074392", "Longimicrobiales bacterium", "2910168", "Bacteria", "Bacteria", "124", "1.9799999999999996e-31", "", "NR", "HEU5210464.1", "2910168", "g23623", "i0", "89.6", "0.810483870967742", "67", "7", "81", "0", "248", "48", "431", "497", "HEU5210464.1 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [Longimicrobiales bacterium]", "diamond", "201", "124", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Longimicrobiia", "Longimicrobiales", null, null, "Longimicrobiales bacterium"], [32697132, "PRJNA1247234_P_NODE_22160_length_250_cov_0.881356_g22004_i0", "PRJNA1247234", "22160", "250", "0.881356", "2.20339", "Gemmatimonadales bacterium", "2448054", "Bacteria", "Bacteria", "78.6", "1.02e-14", "", "NR", "MBT4188854.1", "2448054", "g22004", "i0", "50.6", "0.924", "77", "38", "92.4", "0", "20", "250", "882", "958", "MBT4188854.1 NgoFVII family restriction endonuclease [Gemmatimonadales bacterium]", "diamond", "231", "78.6", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "Gemmatimonadales bacterium"], [32791530, "PRJNA1247234_P_NODE_23800_length_248_cov_0.891429_g23644_i0", "PRJNA1247234", "23800", "248", "0.891429", "2.21074392", "Gemmatimonadota bacterium", "2026742", "Bacteria", "Bacteria", "98.6", "8.86e-22", "", "NR", "MFC1575951.1", "2026742", "g23644", "i0", "60", "1.94758064516129", "80", "31", "96.8", "1", "4", "243", "187", "265", "MFC1575951.1 ATP-binding protein [Gemmatimonadota bacterium]", "diamond", "483", "98.6", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadota bacterium"]], "truncated": false, "filtered_table_rows_count": 16, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA1247234", "p1": "FCB group", "p2": "Gemmatimonadota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1247234&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "PRJNA1247234", "label": "PRJNA1247234", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1247234&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "diamond", "label": "diamond", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1247234&tax_clade=FCB+group&tax_phylum=Gemmatimonadota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 5, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1247234&tax_clade=FCB+group&tax_phylum=Gemmatimonadota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1247234&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1247234&tax_clade=FCB+group&tax_phylum=Gemmatimonadota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1247234&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "FCB group", "label": "FCB group", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1247234&tax_phylum=Gemmatimonadota", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1247234&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1247234&tax_clade=FCB+group&tax_phylum=Gemmatimonadota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1247234&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "Gemmatimonadota", "label": "Gemmatimonadota", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1247234&tax_clade=FCB+group", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 298.21652799728326}