{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA1227535\" and tax_phylum = \"Gemmatimonadota\"", "rows": [[335511, "PRJNA1227535_P_NODE_5901_length_312_cov_4.376569_g5778_i0", "PRJNA1227535", "5901", "312", "4.376569", "13.65489528", "Gemmatimonadota bacterium", "2026742", "Bacteria", "Bacteria", "171", "1.9499999999999993e-52", "", "NR", "MFS8636829.1", "2026742", "g5778", "i0", "91.3", "0.990384615384615", "103", "5", "99", "1", "3", "311", "39", "137", "MFS8636829.1 rod shape-determining protein MreD [Gemmatimonadota bacterium]", "diamond", "309", "171", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadota bacterium"], [335522, "PRJNA1227535_P_NODE_6561_length_312_cov_3.246862_g6438_i0", "PRJNA1227535", "6561", "312", "3.246862", "10.13020944", "Gemmatimonadota bacterium", "2026742", "Bacteria", "Bacteria", "98.2", "2.88e-21", "", "NR", "MFS8637428.1", "2026742", "g6438", "i0", "81.2", "0.663461538461538", "69", "12", "65.4", "1", "3", "206", "331", "399", "MFS8637428.1 BamA/TamA family outer membrane protein [Gemmatimonadota bacterium]", "diamond", "207", "98.2", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadota bacterium"], [3597517, "PRJNA1227535_P_NODE_23343_length_251_cov_1.331461_g23219_i0", "PRJNA1227535", "23343", "251", "1.331461", "3.34196711", "FCB group", "1783270", "Bacteria", "Bacteria", "129", "3.97e-33", "", "NR", "HSU95088.1", "2026741", "g23219", "i0", "72.3", "9.8725099601593609", "83", "22", "98", "1", "249", "4", "233", "315", "HSU95088.1 Fic family protein [Gemmatimonadaceae bacterium]", "diamond", "2478", "129", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", null, "Gemmatimonadaceae bacterium"], [4162480, "PRJNA1227535_P_NODE_32924_length_228_cov_3.329032_g32800_i0", "PRJNA1227535", "32924", "228", "3.329032", "7.59019296", "Gemmatirosa kalamazoonensis", "861299", "Bacteria", "Bacteria", "206", "1.4699999999999998e-48", "", "NTclustered", "gi|575456455|gb|CP007128.1|", "861299", "g32800", "i0", "90", "12.5964912280702", "160", "15", "70", "1", "60", "219", "3595804", "3595962", "Gemmatirosa kalamazoonesis strain KBS708, complete genome", "blastn", "2872", "206", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatirosa", "Gemmatirosa kalamazoonensis"], [7988798, "PRJNA1227535_P_NODE_26967_length_246_cov_2.491329_g26843_i0", "PRJNA1227535", "26967", "246", "2.491329", "6.12866934", "Gemmatirosa kalamazoonensis", "861299", "Bacteria", "Bacteria", "163", "9.84e-36", "", "NTclustered", "gi|575456455|gb|CP007128.1|", "861299", "g26843", "i0", "79.051", "1.02845528455285", "253", "41", "99", "11", "3", "246", "3093691", "3093940", "Gemmatirosa kalamazoonesis strain KBS708, complete genome", "blastn", "253", "163", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatirosa", "Gemmatirosa kalamazoonensis"], [10539392, "PRJNA1227535_P_NODE_6789_length_312_cov_3.075314_g6666_i0", "PRJNA1227535", "6789", "312", "3.075314", "9.59497968", "Gemmatimonadales bacterium", "2448054", "Bacteria", "Bacteria", "93.6", "3.01e-20", "", "NR", "HWB41250.1", "2448054", "g6666", "i0", "87.8", "1.55769230769231", "49", "6", "47.1", "0", "164", "310", "5", "53", "HWB41250.1 FG-GAP-like repeat-containing protein [Gemmatimonadales bacterium]", "diamond", "486", "93.6", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "Gemmatimonadales bacterium"], [15074519, "PRJNA1227535_P_NODE_17632_length_266_cov_1.616580_g17509_i0", "PRJNA1227535", "17632", "266", "1.61658", "4.3001028", "Gemmatimonadetes bacterium T265", "2839016", "Bacteria", "Bacteria", "127", "3.2e-35", "", "NR", "GJG85273.1", "2839016", "g17509", "i0", "88", "0.845864661654135", "75", "9", "84.6", "0", "41", "265", "1", "75", "GJG85273.1 hypothetical protein tb265_04540 [Gemmatimonadetes bacterium T265]", "diamond", "225", "127", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadetes bacterium T265"], [18186769, "PRJNA1227535_P_NODE_18255_length_264_cov_1.853403_g18131_i0", "PRJNA1227535", "18255", "264", "1.853403", "4.89298392", "Longimicrobium sp.", "2029185", "Bacteria", "Bacteria", "136", "4.73e-35", "", "NR", "HEX8432664.1", "2029185", "g18131", "i0", "77", "0.988636363636364", "87", "20", "98.9", "0", "262", "2", "491", "577", "HEX8432664.1 class I SAM-dependent DNA methyltransferase [Longimicrobium sp.]", "diamond", "261", "136", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Longimicrobiia", "Longimicrobiales", "Longimicrobiaceae", "Longimicrobium", "Longimicrobium sp."], [19461158, "PRJNA1227535_P_NODE_14156_length_278_cov_1.482927_g14033_i0", "PRJNA1227535", "14156", "278", "1.482927", "4.12253706", "Gemmatimonadaceae bacterium", "2026741", "Bacteria", "Bacteria", "162", "1.84e-45", "", "NR", "HET7553900.1", "2026741", "g14033", "i0", "85.7", "3.91726618705036", "91", "13", "98.2", "0", "6", "278", "205", "295", "HET7553900.1 leucyl aminopeptidase [Gemmatimonadaceae bacterium]", "diamond", "1089", "162", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", null, "Gemmatimonadaceae bacterium"], [23287447, "PRJNA1227535_P_NODE_15739_length_272_cov_2.989950_g15616_i0", "PRJNA1227535", "15739", "272", "2.98995", "8.132664", "Gemmatimonadota", "142182", "Bacteria", "Bacteria", "78.2", "1.58e-14", "", "NR", "CAA9343818.1", "246130", "g15616", "i0", "48.7", "4.05882352941176", "78", "22", "66.2", "1", "4", "183", "314", "391", "CAA9343818.1 MAG: Glucose-1-phosphate adenylyltransferase [uncultured Gemmatimonadaceae bacterium]", "diamond", "1104", "78.2", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", null, "uncultured Gemmatimonadaceae bacterium"], [27957195, "PRJNA1227535_P_NODE_6885_length_312_cov_3.016736_g6762_i0", "PRJNA1227535", "6885", "312", "3.016736", "9.41221632", "Gemmatimonadetes bacterium T265", "2839016", "Bacteria", "Bacteria", "89.7", "4.78e-19", "", "NR", "GJG87996.1", "2839016", "g6762", "i0", "86", "0.480769230769231", "50", "7", "48.1", "0", "310", "161", "152", "201", "GJG87996.1 prolipoprotein diacylglyceryl transferase [Gemmatimonadetes bacterium T265]", "diamond", "150", "89.7", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadetes bacterium T265"], [29049553, "PRJNA1227535_P_NODE_23208_length_251_cov_1.752809_g23084_i0", "PRJNA1227535", "23208", "251", "1.752809", "4.39955059", "Bacteria", "2", "Bacteria", "Bacteria", "61.2", "1.2e-8", "", "NR", "HEX2717020.1", "2026741", "g23084", "i0", "72.2", "1.43426294820717", "36", "10", "43", "0", "120", "13", "353", "388", "HEX2717020.1 thioredoxin-like domain-containing protein [Gemmatimonadaceae bacterium]", "diamond", "360", "61.6", "0.993506493506494", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", null, "Gemmatimonadaceae bacterium"], [30641313, "PRJNA1227535_P_NODE_20313_length_257_cov_2.755435_g20189_i0", "PRJNA1227535", "20313", "257", "2.755435", "7.08146795", "Gemmatimonadales bacterium", "2448054", "Bacteria", "Bacteria", "77.8", "8.74e-17", "", "NR", "HSE45955.1", "2448054", "g20189", "i0", "51.6", "0.723735408560311", "62", "30", "72.4", "0", "70", "255", "1", "62", "HSE45955.1 DJ-1/PfpI family protein [Gemmatimonadales bacterium]", "diamond", "186", "77.8", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "Gemmatimonadales bacterium"], [31684478, "PRJNA1227535_P_NODE_9557_length_294_cov_2.619910_g9434_i0", "PRJNA1227535", "9557", "294", "2.61991", "7.7025354", "Gemmatimonadales bacterium", "2448054", "Bacteria", "Bacteria", "90.9", "4.5e-19", "", "NR", "HEY8257470.1", "2448054", "g9434", "i0", "87.8", "1.5", "49", "6", "50", "0", "146", "292", "298", "346", "HEY8257470.1 glycosyltransferase family 4 protein [Gemmatimonadales bacterium]", "diamond", "441", "90.9", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "Gemmatimonadales bacterium"], [31734850, "PRJNA1227535_P_NODE_6497_length_312_cov_3.309623_g6374_i0", "PRJNA1227535", "6497", "312", "3.309623", "10.32602376", "Bacteria", "2", "Bacteria", "Bacteria", "92.8", "2.25e-19", "", "NR", "MCU0616193.1", "2026741", "g6374", "i0", "91.8", "1.88461538461538", "49", "4", "47.1", "0", "311", "165", "616", "664", "MCU0616193.1 magnesium chelatase subunit H [Gemmatimonadaceae bacterium]", "diamond", "588", "92.8", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", null, "Gemmatimonadaceae bacterium"]], "truncated": false, "filtered_table_rows_count": 15, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_phylum\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA1227535", "p1": "Gemmatimonadota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1227535&tax_phylum=Gemmatimonadota", "results": [{"value": "PRJNA1227535", "label": "PRJNA1227535", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_phylum=Gemmatimonadota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1227535&tax_phylum=Gemmatimonadota", "results": [{"value": "diamond", "label": "diamond", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1227535&tax_phylum=Gemmatimonadota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1227535&tax_phylum=Gemmatimonadota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1227535&tax_phylum=Gemmatimonadota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1227535&tax_phylum=Gemmatimonadota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1227535&tax_phylum=Gemmatimonadota", "results": [{"value": "FCB group", "label": "FCB group", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1227535&tax_phylum=Gemmatimonadota&tax_clade=FCB+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1227535&tax_phylum=Gemmatimonadota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1227535&tax_phylum=Gemmatimonadota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1227535&tax_phylum=Gemmatimonadota", "results": [{"value": "Gemmatimonadota", "label": "Gemmatimonadota", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1227535", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 349.24303599837003}