{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA1227535\", tax_clade = \"PVC group\" and tax_phylum = \"Verrucomicrobiota\"", "rows": [[2886040, "PRJNA1227535_P_NODE_11263_length_288_cov_1.451163_g11140_i0", "PRJNA1227535", "11263", "288", "1.451163", "4.17934944", "Luteolibacter luteus", "2728835", "Bacteria", "Bacteria", "200", "8.99e-47", "", "NTclustered", "gi|1835317346|gb|CP051774.1|", "2728835", "g11140", "i0", "81.557", "10.7777777777778", "244", "43", "84", "2", "1", "243", "4046240", "4046482", "Luteolibacter luteus strain G-1-1-1 chromosome, complete genome", "blastn", "3104", "200", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", "Luteolibacter", "Luteolibacter luteus"], [9263453, "PRJNA1227535_P_NODE_28428_length_245_cov_0.906977_g28304_i0", "PRJNA1227535", "28428", "245", "0.906977", "2.22209365", "Akkermansia muciniphila", "239935", "Bacteria", "Bacteria", "453", "5.1900000000000006e-123", "", "NTclustered", "gi|1888387165|gb|CP058562.1|", "239935", "g28304", "i0", "100", "99.1265306122449", "245", "0", "100", "0", "1", "245", "2046344", "2046588", "Akkermansia muciniphila strain AK32 chromosome, complete genome", "blastn", "24286", "453", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Akkermansiaceae", "Akkermansia", "Akkermansia muciniphila"], [19461245, "PRJNA1227535_P_NODE_19156_length_261_cov_2.186170_g19032_i0", "PRJNA1227535", "19156", "261", "2.18617", "5.7059037", "Candidatus Udaeobacter sp.", "2665650", "Bacteria", "Bacteria", "140", "1.4e-38", "", "NR", "HEV8419302.1", "2665650", "g19032", "i0", "97.2", "0.816091954022989", "71", "2", "81.6", "0", "1", "213", "249", "319", "HEV8419302.1 MupA/Atu3671 family FMN-dependent luciferase-like monooxygenase [Candidatus Udaeobacter sp.]", "diamond", "213", "140", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Spartobacteria", "Chthoniobacterales", "Chthoniobacteraceae", "Candidatus Udaeobacter", "Candidatus Udaeobacter sp."], [19461418, "PRJNA1227535_P_NODE_29696_length_243_cov_1.452941_g29572_i0", "PRJNA1227535", "29696", "243", "1.452941", "3.53064663", "Luteolibacter ambystomatis", "2824561", "Bacteria", "Bacteria", "204", "5.71e-48", "", "NTclustered", "gi|2029343589|gb|CP073100.1|", "2824561", "g29572", "i0", "84.466", "95.0123456790123", "206", "32", "85", "0", "2", "207", "1875545", "1875750", "Luteolibacter ambystomatis strain 32A chromosome, complete genome", "blastn", "23088", "204", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", "Luteolibacter", "Luteolibacter ambystomatis"], [26629581, "PRJNA1227535_P_NODE_21281_length_254_cov_2.436464_g21157_i0", "PRJNA1227535", "21281", "254", "2.436464", "6.18861856", "Verrucomicrobiota bacterium", "2026799", "Bacteria", "Bacteria", "46.6", "0.0018600000000000001", "", "NR", "MEK0449885.1", "2026799", "g21157", "i0", "42.2", "0.755905511811024", "64", "36", "75.6", "1", "193", "2", "14", "76", "MEK0449885.1 hypothetical protein [Verrucomicrobiota bacterium]", "diamond", "192", "46.6", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"], [26883090, "PRJNA1227535_P_NODE_17161_length_268_cov_1.317949_g17038_i0", "PRJNA1227535", "17161", "268", "1.317949", "3.53210332", "Verrucomicrobiota bacterium", "2026799", "Bacteria", "Bacteria", "189", "1.3199999999999998e-55", "", "NR", "MBK9139825.1", "2026799", "g17038", "i0", "98.9", "0.996268656716418", "89", "1", "99.6", "0", "267", "1", "272", "360", "MBK9139825.1 PQQ-binding-like beta-propeller repeat protein [Verrucomicrobiota bacterium]", "diamond", "267", "189", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"], [27452206, "PRJNA1227535_P_NODE_29743_length_243_cov_0.917647_g29619_i0", "PRJNA1227535", "29743", "243", "0.917647", "2.22988221", "Verrucomicrobiota bacterium", "2026799", "Bacteria", "Bacteria", "63.9", "4.35e-10", "", "NR", "MEO0017661.1", "2026799", "g29619", "i0", "50.7", "0.851851851851852", "69", "21", "75.3", "2", "61", "243", "40", "103", "MEO0017661.1 hypothetical protein [Verrucomicrobiota bacterium]", "diamond", "207", "63.9", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"], [28304434, "PRJNA1227535_P_NODE_17406_length_267_cov_1.567010_g17283_i0", "PRJNA1227535", "17406", "267", "1.56701", "4.1839167", "Pedosphaera sp.", "2024890", "Bacteria", "Bacteria", "171", "3.36e-50", "", "NR", "MDB6122879.1", "2024890", "g17283", "i0", "93.2", "0.98876404494382", "88", "6", "98.9", "0", "265", "2", "254", "341", "MDB6122879.1 Response regulator receiver sensor signal transduction histidine kinase [Pedosphaera sp.]", "diamond", "264", "171", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Pedosphaerae", "Pedosphaerales", "Pedosphaeraceae", "Pedosphaera", "Pedosphaera sp."], [28620399, "PRJNA1227535_P_NODE_29947_length_243_cov_0.917647_g29823_i0", "PRJNA1227535", "29947", "243", "0.917647", "2.22988221", "Prosthecobacter algae", "1144682", "Bacteria", "Bacteria", "130", "2.05e-33", "", "NR", "WP_345738873.1", "1144682", "g29823", "i0", "74.1", "2", "81", "21", "100", "0", "1", "243", "383", "463", "WP_345738873.1 amidase [Prosthecobacter algae]", "diamond", "486", "130", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", "Prosthecobacter", "Prosthecobacter algae"], [28683537, "PRJNA1227535_P_NODE_17047_length_268_cov_1.600000_g16924_i0", "PRJNA1227535", "17047", "268", "1.6", "4.288", "Luteolibacter sp. SL25", "1962973", "Bacteria", "Bacteria", "134", "9.85e-37", "", "NR", "WP_267672868.1", "2995170", "g16924", "i0", "86.3", "1.63432835820896", "73", "10", "81.7", "0", "48", "266", "1", "73", "WP_267672868.1 S1 RNA-binding domain-containing protein [Luteolibacter sp. SL250]", "diamond", "438", "134", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", "Luteolibacter", "Luteolibacter sp. SL250"], [29030905, "PRJNA1227535_P_NODE_25488_length_248_cov_1.765714_g25364_i0", "PRJNA1227535", "25488", "248", "1.765714", "4.37897072", "Terrimicrobiaceae bacterium", "2832348", "Bacteria", "Bacteria", "120", "1.79e-29", "", "NR", "HRJ70900.1", "2832348", "g25364", "i0", "72", "2.9758064516129", "82", "19", "99.2", "1", "246", "1", "29", "106", "HRJ70900.1 2-oxoglutarate dehydrogenase E1 component [Terrimicrobiaceae bacterium]", "diamond", "738", "120", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Terrimicrobiia", "Terrimicrobiales", "Terrimicrobiaceae", null, "Terrimicrobiaceae bacterium"], [29175888, "PRJNA1227535_P_NODE_18989_length_262_cov_1.476190_g18865_i0", "PRJNA1227535", "18989", "262", "1.47619", "3.8676178", "Roseimicrobium", "1348508", "Bacteria", "Bacteria", "147", "9.19e-40", "", "NR", "OAI58152.1", "1799659", "g18865", "i0", "89.5", "1.96946564885496", "86", "9", "98.5", "0", "3", "260", "207", "292", "OAI58152.1 ABC transporter ATP-binding protein [Verrucomicrobiaceae bacterium SCGC AG-212-N21]", "diamond", "516", "148", "0.993243243243243", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", null, "Verrucomicrobiaceae bacterium SCGC AG-212-N21"], [30104242, "PRJNA1227535_P_NODE_30952_length_242_cov_0.923077_g30828_i0", "PRJNA1227535", "30952", "242", "0.923077", "2.23384634", "Luteolibacter marinus", "2776705", "Bacteria", "Bacteria", "55.5", "1.24e-6", "", "NR", "WP_193213683.1", "2776705", "g30828", "i0", "49.4", "1.00413223140496", "81", "40", "99.2", "1", "241", "2", "56", "136", "WP_193213683.1 LamG-like jellyroll fold domain-containing protein [Luteolibacter marinus]", "diamond", "243", "55.5", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", "Luteolibacter", "Luteolibacter marinus"], [31052499, "PRJNA1227535_P_NODE_32115_length_234_cov_2.621118_g31991_i0", "PRJNA1227535", "32115", "234", "2.621118", "6.13341612", "Luteolibacter sp. SL25", "1962973", "Bacteria", "Bacteria", "108", "1.3399999999999999e-25", "", "NR", "WP_267672916.1", "2995170", "g31991", "i0", "85.5", "0.705128205128205", "55", "8", "70.5", "0", "3", "167", "510", "564", "WP_267672916.1 FMN-binding protein [Luteolibacter sp. SL250]", "diamond", "165", "108", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", "Luteolibacter", "Luteolibacter sp. SL250"], [31083849, "PRJNA1227535_P_NODE_14075_length_278_cov_1.775610_g13952_i0", "PRJNA1227535", "14075", "278", "1.77561", "4.9361958", "Prosthecobacter sp.", "1965333", "Bacteria", "Bacteria", "113", "9.97e-27", "", "NR", "HEY1081856.1", "1965333", "g13952", "i0", "58.7", "0.992805755395683", "92", "38", "99.3", "0", "277", "2", "344", "435", "HEY1081856.1 PSD1 and planctomycete cytochrome C domain-containing protein [Prosthecobacter sp.]", "diamond", "276", "113", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", "Prosthecobacter", "Prosthecobacter sp."], [31241689, "PRJNA1227535_P_NODE_7795_length_312_cov_2.585774_g7672_i0", "PRJNA1227535", "7795", "312", "2.585774", "8.06761488", "Prosthecobacter sp.", "1965333", "Bacteria", "Bacteria", "155", "2.09e-41", "", "NR", "HEY1053391.1", "1965333", "g7672", "i0", "56.8", "1.33653846153846", "139", "25", "100", "1", "312", "1", "131", "269", "HEY1053391.1 FtsX-like permease family protein [Prosthecobacter sp.]", "diamond", "417", "155", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", "Prosthecobacter", "Prosthecobacter sp."], [32209652, "PRJNA1227535_P_NODE_21138_length_255_cov_1.587912_g21014_i0", "PRJNA1227535", "21138", "255", "1.587912", "4.0491756", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "87.8", "5.52e-18", "", "NR", "MBS0648367.1", "2026799", "g21014", "i0", "49.4", "3.94117647058824", "85", "43", "100", "0", "255", "1", "168", "252", "MBS0648367.1 leucyl aminopeptidase [Verrucomicrobiota bacterium]", "diamond", "1005", "88.6", "0.99097065462754", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"]], "truncated": false, "filtered_table_rows_count": 17, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA1227535", "p1": "PVC group", "p2": "Verrucomicrobiota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1227535&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "PRJNA1227535", "label": "PRJNA1227535", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1227535&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "diamond", "label": "diamond", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1227535&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1227535&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1227535&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1227535&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1227535&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "PVC group", "label": "PVC group", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1227535&tax_phylum=Verrucomicrobiota", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1227535&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1227535&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1227535&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "Verrucomicrobiota", "label": "Verrucomicrobiota", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1227535&tax_clade=PVC+group", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 299.6504350012401}