{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA1226487\" and tax_phylum = \"Campylobacterota\"", "rows": [[5438329, "PRJNA1226487_P_NODE_81825_length_226_cov_2.013072_g81723_i0", "PRJNA1226487", "81825", "226", "2.013072", "4.54954272", "Campylobacter geochelonis", "1780362", "Bacteria", "Bacteria", "54.7", "0.006", "", "NTclustered", "gi|1847322497|gb|CP053844.1|", "1780362", "g81723", "i0", "92.308", "0.172566371681416", "39", "1", "17", "2", "91", "129", "2096805", "2096841", "Campylobacter geochelonis strain LMG 29375 chromosome, complete genome", "blastn", "39", "54.7", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter geochelonis"], [7988463, "PRJNA1226487_P_NODE_74587_length_244_cov_0.900585_g74485_i0", "PRJNA1226487", "74587", "244", "0.900585", "2.1974274", "Campylobacter rectus", "203", "Bacteria", "Bacteria", "368", "1.92e-97", "", "NTclustered", "gi|1622745323|gb|CP012543.1|", "203", "g74485", "i0", "93.852", "12.7131147540984", "244", "15", "100", "0", "1", "244", "1668880", "1669123", "Campylobacter rectus strain ATCC 33238, complete genome", "blastn", "3102", "368", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter rectus"], [20736550, "PRJNA1226487_P_NODE_82057_length_224_cov_4.437086_g81955_i0", "PRJNA1226487", "82057", "224", "4.437086", "9.93907264", "Campylobacter ureolyticus", "827", "Bacteria", "Bacteria", "407", "3.69e-109", "", "NTclustered", "gi|1966876394|gb|CP068487.1|", "827", "g81955", "i0", "100", "3.92857142857143", "220", "0", "98", "0", "1", "220", "1341984", "1341765", "Campylobacter ureolyticus strain FDAARGOS_1102 chromosome", "blastn", "880", "407", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter ureolyticus"], [27786637, "PRJNA1226487_P_NODE_76544_length_242_cov_1.822485_g76442_i0", "PRJNA1226487", "76544", "242", "1.822485", "4.4104137", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "59.3", "2.31e-8", "", "NR", "MCB4773506.1", "1969726", "g76442", "i0", "39.4", "8.81404958677686", "71", "43", "88", "0", "10", "222", "52", "122", "MCB4773506.1 DUF1891 domain-containing protein [Sulfurovum sp.]", "diamond", "2133", "59.3", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Sulfurovaceae", "Sulfurovum", "Sulfurovum sp."], [30249739, "PRJNA1226487_P_NODE_7232_length_494_cov_3.807601_g7135_i0", "PRJNA1226487", "7232", "494", "3.807601", "18.80954894", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "123", "1e-31", "", "NR", "GMT39229.1", "56877", "g7135", "i0", "45.5", "7.63967611336032", "156", "74", "94.7", "4", "474", "7", "68", "212", "GMT39229.1 glutathione S-transferase family protein [Helicobacter bizzozeronii]", "diamond", "3774", "124", "0.991935483870968", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter bizzozeronii"]], "truncated": false, "filtered_table_rows_count": 5, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_phylum\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA1226487", "p1": "Campylobacterota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1226487&tax_phylum=Campylobacterota", "results": [{"value": "PRJNA1226487", "label": "PRJNA1226487", "count": 5, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1226487&tax_phylum=Campylobacterota", "results": [{"value": "blastn", "label": "blastn", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1226487&tax_phylum=Campylobacterota&analysis=blastn", "selected": false}, {"value": "diamond", "label": "diamond", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1226487&tax_phylum=Campylobacterota&analysis=diamond", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1226487&tax_phylum=Campylobacterota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 5, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1226487&tax_phylum=Campylobacterota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1226487&tax_phylum=Campylobacterota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1226487&tax_phylum=Campylobacterota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 5, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1226487&tax_phylum=Campylobacterota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1226487&tax_phylum=Campylobacterota", "results": [{"value": "Campylobacterota", "label": "Campylobacterota", "count": 5, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1226487", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 365.8786619998864}