{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA1197996\", tax_phylum = \"Campylobacterota\" and tax_superkingdom = \"Bacteria\"", "rows": [[323910, "PRJNA1197996_S_NODE_1581_length_606_cov_4.275797_g1533_i0", "PRJNA1197996", "1581", "606", "4.275797", "25.91132982", "Helicobacter rodentium", "59617", "Bacteria", "Bacteria", "1110", "0", "", "NTclustered", "gi|50957140|gb|AY596225.1|", "59617", "g1533", "i0", "99.834", "147.420792079208", "604", "1", "99", "0", "3", "606", "2228", "1625", "Helicobacter rodentium strain MIT 95-1707 23S ribosomal RNA gene, partial sequence", "blastn", "89337", "1110", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter rodentium"], [9971770, "PRJNA1197996_S_NODE_6688_length_379_cov_0.957516_g6634_i0", "PRJNA1197996", "6688", "379", "0.957516", "3.62898564", "root", "1", "Root_unresolved", "Root_unresolved", "99", "4.57e-16", "", "NTclustered", "gi|2222034613|gb|CP094108.1|", "210", "g6634", "i0", "92.754", "16.8284960422164", "69", "3", "18", "1", "311", "379", "685180", "685114", "Helicobacter pylori strain Hpfe073 chromosome, complete genome", "blastn", "6378", "99", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [14352892, "PRJNA1197996_S_NODE_1512_length_615_cov_5.723247_g1465_i0", "PRJNA1197996", "1512", "615", "5.723247", "35.19796905", "Helicobacter rodentium", "59617", "Bacteria", "Bacteria", "1131", "0", "", "NTclustered", "gi|50957140|gb|AY596225.1|", "59617", "g1465", "i0", "99.837", "140.565853658537", "615", "1", "100", "0", "1", "615", "1570", "956", "Helicobacter rodentium strain MIT 95-1707 23S ribosomal RNA gene, partial sequence", "blastn", "86448", "1131", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter rodentium"], [19449825, "PRJNA1197996_S_NODE_11616_length_319_cov_1.378049_g11562_i0", "PRJNA1197996", "11616", "319", "1.378049", "4.39597631", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "110", "1.75e-19", "", "NTclustered", "gi|2222034613|gb|CP094108.1|", "210", "g11562", "i0", "94.444", "18.9498432601881", "72", "2", "23", "1", "1", "72", "685112", "685181", "Helicobacter pylori strain Hpfe073 chromosome, complete genome", "blastn", "6045", "110", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [23995732, "PRJNA1197996_S_NODE_18099_length_276_cov_1.768473_g18045_i0", "PRJNA1197996", "18099", "276", "1.768473", "4.88098548", "Helicobacter", "209", "Bacteria", "Bacteria", "510", "3.48e-140", "", "NTclustered", "gi|50957140|gb|AY596225.1|", "59617", "g18045", "i0", "100", "143.278985507246", "276", "0", "100", "0", "1", "276", "2666", "2391", "Helicobacter rodentium strain MIT 95-1707 23S ribosomal RNA gene, partial sequence", "blastn", "39545", "510", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter rodentium"]], "truncated": false, "filtered_table_rows_count": 5, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_phylum\" = :p1 and \"tax_superkingdom\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA1197996", "p1": "Campylobacterota", "p2": "Bacteria"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1197996&tax_phylum=Campylobacterota&tax_superkingdom=Bacteria", "results": [{"value": "PRJNA1197996", "label": "PRJNA1197996", "count": 5, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_phylum=Campylobacterota&tax_superkingdom=Bacteria", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1197996&tax_phylum=Campylobacterota&tax_superkingdom=Bacteria", "results": [{"value": "blastn", "label": "blastn", "count": 5, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1197996&tax_phylum=Campylobacterota&tax_superkingdom=Bacteria&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1197996&tax_phylum=Campylobacterota&tax_superkingdom=Bacteria", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 5, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1197996&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1197996&tax_phylum=Campylobacterota&tax_superkingdom=Bacteria", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1197996&tax_phylum=Campylobacterota&tax_superkingdom=Bacteria", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 5, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1197996&tax_phylum=Campylobacterota&tax_superkingdom=Bacteria&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1197996&tax_phylum=Campylobacterota&tax_superkingdom=Bacteria", "results": [{"value": "Campylobacterota", "label": "Campylobacterota", "count": 5, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1197996&tax_superkingdom=Bacteria", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 363.00781498721335}