{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA1196438\" and tax_phylum = \"Chlamydiota\"", "rows": [[1597986, "PRJNA1196438_P_NODE_60662_length_257_cov_2.239130_g60235_i0", "PRJNA1196438", "60662", "257", "2.23913", "5.7545641", "Candidatus Piscichlamydia sp.", "1977145", "Bacteria", "Bacteria", "436", "5.52e-118", "", "NTclustered", "gi|1175896721|gb|KY380088.1|", "1977145", "g60235", "i0", "98.776", "95.8287937743191", "245", "3", "95", "0", "13", "257", "403", "647", "Candidatus Piscichlamydia sp. strain EP 16S ribosomal RNA gene, partial sequence", "blastn", "24628", "436", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Candidatus Piscichlamydiaceae", "Candidatus Piscichlamydia", "Candidatus Piscichlamydia sp."], [3593878, "PRJNA1196438_P_NODE_67983_length_249_cov_1.750000_g67556_i0", "PRJNA1196438", "67983", "249", "1.75", "4.3575", "PVC group", "1783257", "Bacteria", "Bacteria", "460", "3.16e-125", "", "NTclustered", "gi|337292513|emb|FR872621.1|", "765953", "g67556", "i0", "100", "60.9718875502008", "249", "0", "100", "0", "1", "249", "1456", "1208", "Waddlia chondrophila 2032/99 annotated genome fragment, clone 1103163150273", "blastn", "15182", "460", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Waddliaceae", "Waddlia", "Waddlia chondrophila"], [4149925, "PRJNA1196438_P_NODE_35044_length_297_cov_2.558036_g34618_i0", "PRJNA1196438", "35044", "297", "2.558036", "7.59736692", "Chlamydiia bacterium", "2052156", "Bacteria", "Bacteria", "62.4", "4.09e-9", "", "NR", "MCH9614076.1", "2052156", "g34618", "i0", "46.9", "1.29292929292929", "64", "32", "62.6", "1", "1", "186", "149", "212", "MCH9614076.1 Ribonuclease BN [Chlamydiia bacterium]", "diamond", "384", "62.4", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", null, null, null, "Chlamydiia bacterium"], [7976334, "PRJNA1196438_P_NODE_27607_length_301_cov_4.179825_g27181_i0", "PRJNA1196438", "27607", "301", "4.179825", "12.58127325", "Chlamydiales bacterium", "2047757", "Bacteria", "Bacteria", "95.5", "2.07e-20", "", "NR", "MBN9378883.1", "2047757", "g27181", "i0", "73.5", "1.87375415282392", "68", "17", "67.8", "1", "299", "96", "107", "173", "MBN9378883.1 NADH-quinone oxidoreductase subunit L [Chlamydiales bacterium]", "diamond", "564", "95.5", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "Chlamydiales bacterium"], [12522067, "PRJNA1196438_P_NODE_59490_length_259_cov_1.672043_g59063_i0", "PRJNA1196438", "59490", "259", "1.672043", "4.33059137", "Neochlamydia", "112987", "Bacteria", "Bacteria", "289", "1.65e-73", "", "NTclustered", "gi|194594624|gb|EU662269.1|", "112235", "g59063", "i0", "86.923", "186.393822393822", "260", "30", "99", "4", "2", "259", "1439", "1182", "Neochlamydia hartmannellae strain ATCC 50802 23S ribosomal RNA gene, partial sequence", "blastn", "48276", "291", "0.993127147766323", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", "Neochlamydia", "Neochlamydia hartmannellae"], [18174472, "PRJNA1196438_P_NODE_10635_length_326_cov_2.339921_g10209_i0", "PRJNA1196438", "10635", "326", "2.339921", "7.62814246", "uncultured Parachlamydiaceae bacterium", "464461", "Bacteria", "Bacteria", "318", "2.74e-82", "", "NTclustered", "gi|2874253811|emb|OY969795.1|", "464461", "g10209", "i0", "84.848", "119.546012269939", "330", "34", "99", "14", "1", "325", "653427", "653745", "MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1", "blastn", "38972", "318", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", null, "uncultured Parachlamydiaceae bacterium"], [27293750, "PRJNA1196438_P_NODE_9303_length_345_cov_1.716912_g8879_i0", "PRJNA1196438", "9303", "345", "1.716912", "5.9233464", "Waddlia chondrophila", "71667", "Bacteria", "Bacteria", "43.9", "0.0425", "", "NR", "WP_013182342.1", "71667", "g8879", "i0", "66.7", "0.234782608695652", "27", "5", "20", "1", "313", "245", "131", "157", "WP_013182342.1 MFS transporter [Waddlia chondrophila]", "diamond", "81", "43.9", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Waddliaceae", "Waddlia", "Waddlia chondrophila"], [27628736, "PRJNA1196438_P_NODE_70404_length_247_cov_0.896552_g69977_i0", "PRJNA1196438", "70404", "247", "0.896552", "2.21448344", "Simkania", "34093", "Bacteria", "Bacteria", "111", "3.28e-29", "", "NR", "MBS3903901.1", "34094", "g69977", "i0", "65.9", "4.96761133603239", "82", "28", "99.6", "0", "246", "1", "22", "103", "MBS3903901.1 YjdF family protein [Simkania sp.]", "diamond", "1227", "111", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Simkaniaceae", "Simkania", "Simkania sp."], [28114611, "PRJNA1196438_P_NODE_4765_length_453_cov_2.731579_g4347_i0", "PRJNA1196438", "4765", "453", "2.731579", "12.37405287", "Chlamydiota bacterium", "2081524", "Bacteria", "Bacteria", "46.6", "0.0128", "", "NR", "MCH9632675.1", "2081524", "g4347", "i0", "54.5", "0.417218543046358", "33", "15", "21.9", "0", "101", "3", "8", "40", "MCH9632675.1 hypothetical protein [Chlamydiota bacterium]", "diamond", "189", "46.6", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", null, null, null, null, "Chlamydiota bacterium"], [32538821, "PRJNA1196438_P_NODE_39039_length_290_cov_2.594470_g38612_i0", "PRJNA1196438", "39039", "290", "2.59447", "7.523963", "Chlamydiota bacterium", "2081524", "Bacteria", "Bacteria", "138", "3.94e-37", "", "NR", "MCH9632073.1", "2081524", "g38612", "i0", "72.9", "0.993103448275862", "96", "26", "99.3", "0", "1", "288", "1", "96", "MCH9632073.1 Peptidoglycan glycosyltransferase MrdB [Chlamydiota bacterium]", "diamond", "288", "138", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", null, null, null, null, "Chlamydiota bacterium"]], "truncated": false, "filtered_table_rows_count": 10, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_phylum\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA1196438", "p1": "Chlamydiota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1196438&tax_phylum=Chlamydiota", "results": [{"value": "PRJNA1196438", "label": "PRJNA1196438", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_phylum=Chlamydiota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1196438&tax_phylum=Chlamydiota", "results": [{"value": "diamond", "label": "diamond", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1196438&tax_phylum=Chlamydiota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1196438&tax_phylum=Chlamydiota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1196438&tax_phylum=Chlamydiota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1196438&tax_phylum=Chlamydiota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1196438&tax_phylum=Chlamydiota", "results": [{"value": "PVC group", "label": "PVC group", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1196438&tax_phylum=Chlamydiota&tax_clade=PVC+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1196438&tax_phylum=Chlamydiota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1196438&tax_phylum=Chlamydiota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1196438&tax_phylum=Chlamydiota", "results": [{"value": "Chlamydiota", "label": "Chlamydiota", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1196438", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 298.71636499956367}