{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA1195551\" and tax_clade = \"PVC group\"", "rows": [[7421004, "PRJNA1195551_S_NODE_37786_length_167_cov_0.881356_g37433_i0", "PRJNA1195551", "37786", "167", "0.881356", "1.47186452", "Waddlia", "71666", "Bacteria", "Bacteria", "113", "6.34e-21", "", "NTclustered", "gi|470485904|ref|NR_076723.1|", "71667", "g37433", "i0", "86.408", "171.706586826347", "103", "14", "62", "0", "65", "167", "1523", "1421", "Waddlia chondrophila strain WSU 86-1044 23S ribosomal RNA gene, complete sequence", "blastn", "28675", "113", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Waddliaceae", "Waddlia", "Waddlia chondrophila"], [9250483, "PRJNA1195551_S_NODE_26648_length_196_cov_1.523810_g26295_i0", "PRJNA1195551", "26648", "196", "1.52381", "2.9866676", "uncultured Parachlamydiaceae bacterium", "464461", "Bacteria", "Bacteria", "189", "1.24e-43", "", "NTclustered", "gi|2874253811|emb|OY969795.1|", "464461", "g26295", "i0", "93.701", "38.1989795918367", "127", "6", "100", "2", "72", "196", "2058534", "2058660", "MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1", "blastn", "7487", "189", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", null, "uncultured Parachlamydiaceae bacterium"], [9250495, "PRJNA1195551_S_NODE_31488_length_181_cov_1.575758_g31135_i0", "PRJNA1195551", "31488", "181", "1.575758", "2.85212198", "uncultured Gemmataceae bacterium", "1914239", "Bacteria", "Bacteria", "246", "6.57e-61", "", "NTclustered", "gi|2874253749|emb|OY969623.1|", "1914239", "g31135", "i0", "91.667", "172.950276243094", "180", "12", "98", "3", "5", "181", "7052353", "7052174", "MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1", "blastn", "31304", "246", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Gemmatales", "Gemmataceae", null, "uncultured Gemmataceae bacterium"], [17620872, "PRJNA1195551_S_NODE_31914_length_180_cov_1.068702_g31561_i0", "PRJNA1195551", "31914", "180", "1.068702", "1.9236636", "Candidatus Protochlamydia", "282132", "Bacteria", "Bacteria", "244", "2.35e-60", "", "NTclustered", "gi|1691252667|emb|BX908798.2|", "264201", "g31561", "i0", "91.525", "9.92777777777778", "177", "15", "98", "0", "1", "177", "1249898", "1250074", "Candidatus Protochlamydia amoebophila UWE25 complete genome", "blastn", "1787", "244", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", "Candidatus Protochlamydia", "Candidatus Protochlamydia amoebophila"], [18894506, "PRJNA1195551_S_NODE_18735_length_230_cov_2.359116_g18382_i0", "PRJNA1195551", "18735", "230", "2.359116", "5.4259668", "Candidatus Protochlamydia", "282132", "Bacteria", "Bacteria", "267", "6.74e-67", "", "NTclustered", "gi|1691252667|emb|BX908798.2|", "264201", "g18382", "i0", "88.21", "131.265217391304", "229", "20", "98", "6", "5", "230", "1251332", "1251108", "Candidatus Protochlamydia amoebophila UWE25 complete genome", "blastn", "30191", "267", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", "Candidatus Protochlamydia", "Candidatus Protochlamydia amoebophila"], [23274767, "PRJNA1195551_S_NODE_1219_length_802_cov_4.159363_g970_i0", "PRJNA1195551", "1219", "802", "4.159363", "33.35809126", "uncultured Parachlamydiaceae bacterium", "464461", "Bacteria", "Bacteria", "1142", "0", "", "NTclustered", "gi|2874253811|emb|OY969795.1|", "464461", "g970", "i0", "92.394", "182.493765586035", "802", "59", "100", "1", "1", "802", "653856", "654655", "MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1", "blastn", "146360", "1142", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", null, "uncultured Parachlamydiaceae bacterium"], [26851164, "PRJNA1195551_S_NODE_20121_length_223_cov_2.120690_g19768_i0", "PRJNA1195551", "20121", "223", "2.12069", "4.7291387", "Planctomycetota bacterium", "2026780", "Bacteria", "Bacteria", "42.4", "0.0398", "", "NR", "MBM4027505.1", "2026780", "g19768", "i0", "44.3", "0.820627802690583", "61", "28", "82.1", "2", "37", "219", "29", "83", "MBM4027505.1 LamG domain-containing protein [Planctomycetota bacterium]", "diamond", "183", "42.4", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", null, null, null, null, "Planctomycetota bacterium"], [28051558, "PRJNA1195551_S_NODE_29005_length_188_cov_2.366906_g28652_i0", "PRJNA1195551", "29005", "188", "2.366906", "4.44978328", "Planctomycetota bacterium", "2026780", "Bacteria", "Bacteria", "43.5", "0.00935", "", "NR", "MBI4554663.1", "2026780", "g28652", "i0", "43.2", "1.77127659574468", "37", "21", "59", "0", "120", "10", "184", "220", "MBI4554663.1 cytochrome C [Planctomycetota bacterium]", "diamond", "333", "43.5", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", null, null, null, null, "Planctomycetota bacterium"], [28746203, "PRJNA1195551_S_NODE_31487_length_181_cov_1.575758_g31134_i0", "PRJNA1195551", "31487", "181", "1.575758", "2.85212198", "Verrucomicrobiota bacterium", "2026799", "Bacteria", "Bacteria", "41.6", "0.0426", "", "NR", "MBI3416934.1", "2026799", "g31134", "i0", "48.8", "0.679558011049724", "41", "16", "68", "1", "177", "55", "483", "518", "MBI3416934.1 2-isopropylmalate synthase [Verrucomicrobiota bacterium]", "diamond", "123", "41.6", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"], [31747504, "PRJNA1195551_S_NODE_20117_length_223_cov_2.298851_g19764_i0", "PRJNA1195551", "20117", "223", "2.298851", "5.12643773", "Planctomycetota bacterium", "2026780", "Bacteria", "Bacteria", "42", "0.0466", "", "NR", "HVG94163.1", "2026780", "g19764", "i0", "37.5", "0.645739910313901", "48", "30", "64.6", "0", "49", "192", "68", "115", "HVG94163.1 phosphatase PAP2 family protein [Planctomycetota bacterium]", "diamond", "144", "42", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", null, null, null, null, "Planctomycetota bacterium"], [31937276, "PRJNA1195551_S_NODE_34317_length_174_cov_1.248000_g33964_i0", "PRJNA1195551", "34317", "174", "1.248", "2.17152", "Verrucomicrobiota bacterium", "2026799", "Bacteria", "Bacteria", "42", "0.028", "", "NR", "MBU4366548.1", "2026799", "g33964", "i0", "32.2", "1.01724137931034", "59", "35", "94.8", "2", "171", "7", "202", "259", "MBU4366548.1 hypothetical protein [Verrucomicrobiota bacterium]", "diamond", "177", "42", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"], [32443945, "PRJNA1195551_S_NODE_21379_length_217_cov_2.464286_g21026_i0", "PRJNA1195551", "21379", "217", "2.464286", "5.34750062", "Verrucomicrobiota bacterium", "2026799", "Bacteria", "Bacteria", "42.4", "0.0348", "", "NR", "MEP7015433.1", "2026799", "g21026", "i0", "42.6", "0.649769585253456", "47", "25", "62.2", "1", "6", "140", "120", "166", "MEP7015433.1 acyl-CoA dehydrogenase family protein [Verrucomicrobiota bacterium]", "diamond", "141", "42.4", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"]], "truncated": false, "filtered_table_rows_count": 12, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA1195551", "p1": "PVC group"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1195551&tax_clade=PVC+group", "results": [{"value": "PRJNA1195551", "label": "PRJNA1195551", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=PVC+group", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1195551&tax_clade=PVC+group", "results": [{"value": "blastn", "label": "blastn", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1195551&tax_clade=PVC+group&analysis=blastn", "selected": false}, {"value": "diamond", "label": "diamond", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1195551&tax_clade=PVC+group&analysis=diamond", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1195551&tax_clade=PVC+group", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1195551&tax_clade=PVC+group&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1195551&tax_clade=PVC+group", "results": [{"value": "PVC group", "label": "PVC group", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1195551", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1195551&tax_clade=PVC+group", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1195551&tax_clade=PVC+group&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1195551&tax_clade=PVC+group", "results": [{"value": "Chlamydiota", "label": "Chlamydiota", "count": 5, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1195551&tax_clade=PVC+group&tax_phylum=Chlamydiota", "selected": false}, {"value": "Planctomycetota", "label": "Planctomycetota", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1195551&tax_clade=PVC+group&tax_phylum=Planctomycetota", "selected": false}, {"value": "Verrucomicrobiota", "label": "Verrucomicrobiota", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1195551&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 314.5154540106887}