{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA1174207\", tax_kingdom = \"Pseudomonadati\" and tax_phylum = \"Bdellovibrionota\"", "rows": [[1590589, "PRJNA1174207_P_NODE_43302_length_226_cov_2.013072_g42773_i0", "PRJNA1174207", "43302", "226", "2.013072", "4.54954272", "Oligoflexales bacterium", "2687297", "Bacteria", "Bacteria", "76.3", "1.47e-14", "", "NR", "MBP9708592.1", "2687297", "g42773", "i0", "51.4", "0.982300884955752", "74", "36", "98.2", "0", "224", "3", "50", "123", "MBP9708592.1 hypothetical protein [Oligoflexales bacterium]", "diamond", "222", "76.3", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Oligoflexia", "Oligoflexales", null, null, "Oligoflexales bacterium"], [4142403, "PRJNA1174207_P_NODE_21424_length_308_cov_3.165957_g20895_i0", "PRJNA1174207", "21424", "308", "3.165957", "9.75114756", "Bdellovibrio sp. HCB337", "3394358", "Bacteria", "Bacteria", "424", "5.29e-114", "", "NTclustered", "gi|2895525383|gb|CP178621.1|", "3394358", "g20895", "i0", "91.558", "197.918831168831", "308", "25", "99", "1", "2", "308", "3446110", "3446417", "Bdellovibrio sp. HCB337 chromosome, complete genome", "blastn", "60959", "424", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", "Pseudobdellovibrionaceae", "Bdellovibrio", "Bdellovibrio sp. HCB337"], [6143557, "PRJNA1174207_P_NODE_32725_length_253_cov_1.711111_g32196_i0", "PRJNA1174207", "32725", "253", "1.711111", "4.32911083", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "340", "4.379999999999999e-89", "", "NTclustered", "gi|469926873|gb|CP003538.1|", "349215", "g32196", "i0", "91.235", "283.766798418972", "251", "20", "99", "2", "1", "251", "463138", "463386", "Micavibrio aeruginosavorus EPB, complete genome", "blastn", "71793", "342", "0.994152046783626", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", "Pseudobdellovibrionaceae", "Micavibrio", "Micavibrio aeruginosavorus"], [10519286, "PRJNA1174207_P_NODE_29429_length_267_cov_1.381443_g28900_i0", "PRJNA1174207", "29429", "267", "1.381443", "3.68845281", "Bdellovibrio bacteriovorus", "959", "Bacteria", "Bacteria", "416", "7.519999999999998e-112", "", "NTclustered", "gi|2800948966|gb|CP168973.1|", "959", "g28900", "i0", "95.076", "153.625468164794", "264", "13", "99", "0", "1", "264", "1677242", "1677505", "Bdellovibrio bacteriovorus strain HK2 chromosome, complete genome", "blastn", "41018", "416", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", "Pseudobdellovibrionaceae", "Bdellovibrio", "Bdellovibrio bacteriovorus"], [11794114, "PRJNA1174207_P_NODE_20850_length_310_cov_3.312236_g20321_i0", "PRJNA1174207", "20850", "310", "3.312236", "10.2679316", "Bdellovibrionales bacterium", "2053517", "Bacteria", "Bacteria", "85.9", "4.6e-17", "", "NR", "MCB0406681.1", "2053517", "g20321", "i0", "69.4", "1.42258064516129", "49", "15", "47.4", "0", "309", "163", "102", "150", "MCB0406681.1 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [Bdellovibrionales bacterium]", "diamond", "441", "85.9", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", null, null, "Bdellovibrionales bacterium"], [15618259, "PRJNA1174207_P_NODE_20413_length_313_cov_2.275000_g19884_i0", "PRJNA1174207", "20413", "313", "2.275", "7.12075", "Bdellovibrionales bacterium", "2053517", "Bacteria", "Bacteria", "171", "5.209999999999999e-52", "", "NR", "MCB0370127.1", "2053517", "g19884", "i0", "78.6", "3.94888178913738", "103", "22", "98.7", "0", "311", "3", "59", "161", "MCB0370127.1 40S ribosomal protein S14 [Bdellovibrionales bacterium]", "diamond", "1236", "171", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", null, null, "Bdellovibrionales bacterium"], [27040550, "PRJNA1174207_P_NODE_40642_length_242_cov_0.911243_g40113_i0", "PRJNA1174207", "40642", "242", "0.911243", "2.20520806", "Bdellovibrionales bacterium CG22_combo_CG1", "2053517", "Bacteria", "Bacteria", "55.8", "8.09e-7", "", "NR", "PIP89443.1", "1973930", "g40113", "i0", "39.5", "0.942148760330578", "76", "46", "94.2", "0", "15", "242", "159", "234", "PIP89443.1 MAG: alkane 1-monooxygenase [Bdellovibrionales bacterium CG22_combo_CG10-13_8_21_14_all_38_13]", "diamond", "228", "55.8", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", null, null, "Bdellovibrionales bacterium CG22_combo_CG10-13_8_21_14_all_38_13"], [28859693, "PRJNA1174207_P_NODE_25028_length_285_cov_2.542453_g24499_i0", "PRJNA1174207", "25028", "285", "2.542453", "7.24599105", "root", "1", "Root_unresolved", "Root_unresolved", "68.6", "7.45e-12", "", "NR", "MDH4468212.1", "2081706", "g24499", "i0", "40.4", "3.03157894736842", "94", "50", "98.9", "2", "283", "2", "96", "183", "MDH4468212.1 lipocalin family protein [Bacteriovoracaceae bacterium]", "diamond", "864", "68.9", "0.995645863570392", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bacteriovoracia", "Bacteriovoracales", "Bacteriovoracaceae", null, "Bacteriovoracaceae bacterium"], [29207298, "PRJNA1174207_P_NODE_32309_length_255_cov_1.439560_g31780_i0", "PRJNA1174207", "32309", "255", "1.43956", "3.670878", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "81.3", "1.19e-15", "", "NR", "QQG36778.1", "349221", "g31780", "i0", "77.1", "1.72941176470588", "48", "11", "56.5", "0", "253", "110", "271", "318", "QQG36778.1 MAG: uroporphyrinogen-III synthase [Micavibrio aeruginosavorus]", "diamond", "441", "81.3", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", "Pseudobdellovibrionaceae", "Micavibrio", "Micavibrio aeruginosavorus"], [29440192, "PRJNA1174207_P_NODE_40750_length_242_cov_0.911243_g40221_i0", "PRJNA1174207", "40750", "242", "0.911243", "2.20520806", "Bdellovibrionales bacterium", "2053517", "Bacteria", "Bacteria", "140", "5.82e-37", "", "NR", "MBX3022978.1", "2053517", "g40221", "i0", "78.8", "0.991735537190083", "80", "17", "99.2", "0", "240", "1", "85", "164", "MBX3022978.1 4Fe-4S dicluster domain-containing protein [Bdellovibrionales bacterium]", "diamond", "240", "140", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", null, null, "Bdellovibrionales bacterium"], [30040535, "PRJNA1174207_P_NODE_18331_length_332_cov_1.521236_g17802_i0", "PRJNA1174207", "18331", "332", "1.521236", "5.05050352", "Bdellovibrionales bacterium", "2053517", "Bacteria", "Bacteria", "139", "3.68e-39", "", "NR", "MCB0369154.1", "2053517", "g17802", "i0", "64.4", "0.939759036144578", "104", "37", "94", "0", "328", "17", "56", "159", "MCB0369154.1 C39 family peptidase [Bdellovibrionales bacterium]", "diamond", "312", "139", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", null, null, "Bdellovibrionales bacterium"], [31020072, "PRJNA1174207_P_NODE_22855_length_297_cov_1.937500_g22326_i0", "PRJNA1174207", "22855", "297", "1.9375", "5.754375", "Bdellovibrionota bacterium", "3034175", "Bacteria", "Bacteria", "68.6", "2.59e-11", "", "NR", "HEY8279801.1", "3034175", "g22326", "i0", "44.1", "1.92929292929293", "93", "52", "93.9", "0", "19", "297", "18", "110", "HEY8279801.1 tetratricopeptide repeat protein [Bdellovibrionota bacterium]", "diamond", "573", "68.6", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", null, null, null, null, "Bdellovibrionota bacterium"], [31810535, "PRJNA1174207_P_NODE_41057_length_241_cov_2.434524_g40528_i0", "PRJNA1174207", "41057", "241", "2.434524", "5.86720284", "Bdellovibrionales bacterium", "2053517", "Bacteria", "Bacteria", "99.4", "3.0099999999999997e-25", "", "NR", "MCB0369232.1", "2053517", "g40528", "i0", "57.5", "0.908713692946058", "73", "31", "90.9", "0", "17", "235", "5", "77", "MCB0369232.1 hypothetical protein [Bdellovibrionales bacterium]", "diamond", "219", "99.4", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", null, null, "Bdellovibrionales bacterium"], [31841978, "PRJNA1174207_P_NODE_35097_length_249_cov_0.875000_g34568_i0", "PRJNA1174207", "35097", "249", "0.875", "2.17875", "Bdellovibrionales bacterium", "2053517", "Bacteria", "Bacteria", "147", "6.489999999999998e-42", "", "NR", "MBX3021450.1", "2053517", "g34568", "i0", "75.6", "1.98795180722892", "82", "20", "98.8", "0", "249", "4", "155", "236", "MBX3021450.1 class I SAM-dependent methyltransferase [Bdellovibrionales bacterium]", "diamond", "495", "147", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", null, null, "Bdellovibrionales bacterium"], [32475132, "PRJNA1174207_P_NODE_22959_length_296_cov_2.986547_g22430_i0", "PRJNA1174207", "22959", "296", "2.986547", "8.84017912", "Bdellovibrionales bacterium", "2053517", "Bacteria", "Bacteria", "116", "4.37e-28", "", "NR", "NUM88387.1", "2053517", "g22430", "i0", "47.7", "7.98648648648649", "132", "34", "98.3", "1", "295", "5", "196", "327", "NUM88387.1 efflux RND transporter permease subunit [Bdellovibrionales bacterium]", "diamond", "2364", "116", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", null, null, "Bdellovibrionales bacterium"], [32526176, "PRJNA1174207_P_NODE_38099_length_245_cov_0.895349_g37570_i0", "PRJNA1174207", "38099", "245", "0.895349", "2.19360505", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "112", "1.6e-26", "", "NR", "MBL7557774.1", "2026715", "g37570", "i0", "72.2", "3.72244897959184", "79", "18", "96.7", "1", "8", "244", "264", "338", "MBL7557774.1 DNA translocase FtsK 4TM domain-containing protein [Pseudobdellovibrionaceae bacterium]", "diamond", "912", "112", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", "Pseudobdellovibrionaceae", null, "Pseudobdellovibrionaceae bacterium"]], "truncated": false, "filtered_table_rows_count": 16, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_kingdom\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA1174207", "p1": "Pseudomonadati", "p2": "Bdellovibrionota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1174207&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota", "results": [{"value": "PRJNA1174207", "label": "PRJNA1174207", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1174207&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota", "results": [{"value": "diamond", "label": "diamond", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1174207&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1174207&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1174207&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1174207&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1174207&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1174207&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1174207&tax_phylum=Bdellovibrionota", "selected": true}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1174207&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota", "results": [{"value": "Bdellovibrionota", "label": "Bdellovibrionota", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1174207&tax_kingdom=Pseudomonadati", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 279.9591599905398}