{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA1160211\" and tax_phylum = \"Nematoda\"", "rows": [[4136259, "PRJNA1160211_S_NODE_163664_length_356_cov_1.360424_g162431_i0", "PRJNA1160211", "163664", "356", "1.360424", "4.84310944", "Strongyloides ratti", "34506", "Nematoda", "Nematoda", "104", "9.17e-18", "", "NTclustered", "gi|1376146209|ref|XM_024653666.1|", "34506", "g162431", "i0", "84.615", "1.28370786516854", "104", "16", "29", "0", "242", "345", "1241", "1138", "Strongyloides ratti AP-47 (SRAE_2000258100), partial mRNA", "blastn", "457", "104", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Strongyloididae", "Strongyloides", "Strongyloides ratti"], [5412726, "PRJNA1160211_S_NODE_203265_length_307_cov_2.380342_g202032_i0", "PRJNA1160211", "203265", "307", "2.380342", "7.30764994", "Eukaryota", "2759", "unresolved_Eukaryota", "other_Eukaryota", "125", "4.55e-32", "", "NR", "KRY41729.1", "6334", "g202032", "i0", "72.2", "5.30618892508143", "79", "22", "77.2", "0", "238", "2", "226", "304", "KRY41729.1 60S ribosomal protein L27a [Trichinella spiralis]", "diamond", "1629", "125", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Enoplea", "Trichinellida", "Trichinellidae", "Trichinella", "Trichinella spiralis"], [10514615, "PRJNA1160211_S_NODE_99309_length_458_cov_33.618182_g98084_i0", "PRJNA1160211", "99309", "458", "33.618182", "153.97127356", "Caenorhabditis briggsae", "6238", "Nematoda", "Nematoda", "327", "6.590000000000001e-85", "", "NTclustered", "gi|268559799|ref|XM_002646027.1|", "6238", "g98084", "i0", "86.039", "67.9978165938865", "308", "39", "67", "4", "5", "310", "1002", "1307", "Caenorhabditis briggsae Protein CBG07939 (CBG07939), partial mRNA", "blastn", "31143", "327", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Rhabditidae", "Caenorhabditis", "Caenorhabditis briggsae"], [13063129, "PRJNA1160211_S_NODE_177331_length_338_cov_1.501887_g176098_i0", "PRJNA1160211", "177331", "338", "1.501887", "5.07637806", "Bursaphelenchus xylophilus", "6326", "Nematoda", "Nematoda", "292", "1.73e-74", "", "NTclustered", "gi|2437461975|gb|ON496984.1|", "6326", "g176098", "i0", "82.799", "49.707100591716", "343", "43", "100", "14", "1", "338", "6891", "7222", "Bursaphelenchus xylophilus isolate F0426-5 28S large subunit ribosomal RNA gene, partial sequence; and 28S-18S ribosomal RNA intergenic spacer, 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence", "blastn", "16801", "292", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Aphelenchoididae", "Bursaphelenchus", "Bursaphelenchus xylophilus"], [13792131, "PRJNA1160211_S_NODE_299331_length_205_cov_8.303030_g298098_i0", "PRJNA1160211", "299331", "205", "8.30303", "17.0212115", "Metazoa", "33208", "Nematoda", "Nematoda", "337", "4.41e-88", "", "NTclustered", "gi|1174020828|gb|KY887583.1|", "6293", "g298098", "i0", "100", "88.790243902439", "182", "0", "89", "0", "1", "182", "1765", "1584", "Wuchereria bancrofti isolate AP10 small subunit ribosomal RNA gene, partial sequence", "blastn", "18202", "339", "0.994100294985251", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Onchocercidae", "Wuchereria", "Wuchereria bancrofti"], [15612569, "PRJNA1160211_S_NODE_211893_length_298_cov_1.124444_g210660_i0", "PRJNA1160211", "211893", "298", "1.124444", "3.35084312", "Strongyloides ratti", "34506", "Nematoda", "Nematoda", "54.7", "0.008", "", "NTclustered", "gi|1376135301|ref|XM_024647662.1|", "34506", "g210660", "i0", "100", "0.191275167785235", "29", "0", "10", "0", "177", "205", "2051", "2079", "Strongyloides ratti Proteinase inhibitor I2, Kunitz metazoa domain-containing protein (SRAE_1000078600), partial mRNA", "blastn", "57", "54.7", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Strongyloididae", "Strongyloides", "Strongyloides ratti"], [16341174, "PRJNA1160211_S_NODE_259313_length_254_cov_3.110497_g258080_i0", "PRJNA1160211", "259313", "254", "3.110497", "7.90066238", "Halicephalobus", "114867", "Nematoda", "Nematoda", "368", "2.02e-97", "", "NTclustered", "gi|564659230|gb|KF765478.1|", "114868", "g258080", "i0", "92.692", "91.6889763779528", "260", "11", "100", "6", "1", "254", "70", "327", "Halicephalobus gingivalis isolate Indigo S1342-13 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence", "blastn", "23289", "368", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Panagrolaimidae", "Halicephalobus", "Halicephalobus gingivalis"], [21986020, "PRJNA1160211_S_NODE_146738_length_379_cov_5.921569_g145505_i0", "PRJNA1160211", "146738", "379", "5.921569", "22.44274651", "Caenorhabditis remanei", "31234", "Nematoda", "Nematoda", "134", "1.25e-26", "", "NTclustered", "gi|2445350017|ref|XM_003114867.2|", "31234", "g145505", "i0", "80.108", "5.39841688654354", "186", "32", "48", "4", "106", "288", "1014", "1197", "Caenorhabditis remanei uncharacterized protein (GCK72_001731), partial mRNA", "blastn", "2046", "134", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Rhabditidae", "Caenorhabditis", "Caenorhabditis remanei"], [23262557, "PRJNA1160211_S_NODE_297419_length_213_cov_4.757143_g296186_i0", "PRJNA1160211", "297419", "213", "4.757143", "10.13271459", "Rhomborhabditis regina", "2528157", "Nematoda", "Nematoda", "167", "6.419999999999999e-37", "", "NTclustered", "gi|157787505|gb|EF990726.1|", "2528157", "g296186", "i0", "85.03", "78.6948356807512", "167", "22", "78", "3", "16", "181", "1063", "899", "Rhabditoides regina strain DF5012 28S large subunit ribosomal RNA gene, partial sequence", "blastn", "16762", "167", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Rhabditidae", "Rhomborhabditis", "Rhomborhabditis regina"], [29522820, "PRJNA1160211_S_NODE_212330_length_297_cov_3.781250_g211097_i0", "PRJNA1160211", "212330", "297", "3.78125", "11.2303125", "Trichuris", "36086", "Nematoda", "Nematoda", "65.9", "4.08e-10", "", "NR", "CDW54430.1", "36087", "g211097", "i0", "61.2", "2.29292929292929", "49", "19", "49.5", "0", "297", "151", "125", "173", "CDW54430.1 mitochondrial uncoupling protein 4 [Trichuris trichiura]", "diamond", "681", "65.9", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Enoplea", "Trichinellida", "Trichuridae", "Trichuris", "Trichuris trichiura"], [29914223, "PRJNA1160211_S_NODE_128591_length_407_cov_4.497006_g127359_i0", "PRJNA1160211", "128591", "407", "4.497006", "18.30281442", "Oesophagostomum dentatum", "61180", "Nematoda", "Nematoda", "47", "0.00601", "", "NR", "KHJ89269.1", "61180", "g127359", "i0", "63.9", "0.265356265356265", "36", "11", "25.1", "2", "274", "173", "218", "253", "KHJ89269.1 hypothetical protein OESDEN_10911 [Oesophagostomum dentatum]", "diamond", "108", "47", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Strongylidae", "Oesophagostomum", "Oesophagostomum dentatum"], [32821638, "PRJNA1160211_S_NODE_271060_length_247_cov_1.327586_g269827_i0", "PRJNA1160211", "271060", "247", "1.327586", "3.27913742", "Diploscapter pachys", "2018661", "Nematoda", "Nematoda", "45.8", "0.00325", "", "NR", "PAV80121.1", "2018661", "g269827", "i0", "34.2", "0.88663967611336", "73", "48", "88.7", "0", "28", "246", "615", "687", "PAV80121.1 hypothetical protein WR25_24733 [Diploscapter pachys]", "diamond", "219", "45.8", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Rhabditidae", "Diploscapter", "Diploscapter pachys"]], "truncated": false, "filtered_table_rows_count": 12, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_phylum\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA1160211", "p1": "Nematoda"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1160211&tax_phylum=Nematoda", "results": [{"value": "PRJNA1160211", "label": "PRJNA1160211", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_phylum=Nematoda", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1160211&tax_phylum=Nematoda", "results": [{"value": "blastn", "label": "blastn", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1160211&tax_phylum=Nematoda&analysis=blastn", "selected": false}, {"value": "diamond", "label": "diamond", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1160211&tax_phylum=Nematoda&analysis=diamond", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1160211&tax_phylum=Nematoda", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1160211&tax_phylum=Nematoda&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1160211&tax_phylum=Nematoda", "results": [{"value": "Opisthokonta", "label": "Opisthokonta", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1160211&tax_phylum=Nematoda&tax_clade=Opisthokonta", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1160211&tax_phylum=Nematoda", "results": [{"value": "Metazoa", "label": "Metazoa", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1160211&tax_phylum=Nematoda&tax_kingdom=Metazoa", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1160211&tax_phylum=Nematoda", "results": [{"value": "Nematoda", "label": "Nematoda", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1160211", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 196.7950070029474}