{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA1160211\", tax_kingdom = \"Pseudomonadati\" and tax_phylum = \"Campylobacterota\"", "rows": [[1583931, "PRJNA1160211_S_NODE_145142_length_381_cov_40.149351_g143909_i0", "PRJNA1160211", "145142", "381", "40.149351", "152.96902731", "Campylobacter concisus", "199", "Bacteria", "Bacteria", "660", "0", "", "NTclustered", "gi|1938719709|gb|CP049264.1|", "199", "g143909", "i0", "100", "124.309711286089", "357", "0", "94", "0", "24", "380", "653862", "654218", "Campylobacter concisus strain P11CDO-S1 chromosome, complete genome", "blastn", "47362", "660", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter concisus"], [1585345, "PRJNA1160211_S_NODE_70802_length_519_cov_105.582960_g69595_i0", "PRJNA1160211", "70802", "519", "105.58296", "547.9755624", "Campylobacter gracilis", "824", "Bacteria", "Bacteria", "863", "0", "", "NTclustered", "gi|909717139|gb|CP012196.1|", "824", "g69595", "i0", "99.37", "259.098265895954", "476", "3", "92", "0", "34", "509", "500450", "500925", "Campylobacter gracilis strain ATCC 33236, complete genome", "blastn", "134472", "863", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter gracilis"], [2314192, "PRJNA1160211_S_NODE_54502_length_562_cov_37.566462_g53327_i0", "PRJNA1160211", "54502", "562", "37.566462", "211.12351644", "Campylobacter", "194", "Bacteria", "Bacteria", "926", "0", "", "NTclustered", "gi|1483583501|emb|LT631425.1|", "204", "g53327", "i0", "98.846", "4.62633451957295", "520", "4", "92", "1", "22", "539", "7997", "7478", "Campylobacter showae genome assembly, plasmid: I", "blastn", "2600", "926", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter showae"], [2861743, "PRJNA1160211_S_NODE_95703_length_465_cov_148.594388_g94478_i0", "PRJNA1160211", "95703", "465", "148.594388", "690.9639042", "Campylobacter gracilis", "824", "Bacteria", "Bacteria", "802", "0", "", "NTclustered", "gi|909717139|gb|CP012196.1|", "824", "g94478", "i0", "99.545", "96.3698924731183", "440", "2", "95", "0", "26", "465", "497359", "497798", "Campylobacter gracilis strain ATCC 33236, complete genome", "blastn", "44812", "802", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter gracilis"], [3589513, "PRJNA1160211_S_NODE_76403_length_506_cov_15.023095_g75189_i0", "PRJNA1160211", "76403", "506", "15.023095", "76.0168607", "Helicobacter", "209", "Bacteria", "Bacteria", "872", "0", "", "NTclustered", "gi|2157108461|dbj|AP025204.1|", "213", "g75189", "i0", "100", "129.835968379447", "472", "0", "93", "0", "35", "506", "127574", "128045", "Helicobacter cinaedi 94105 DNA, complete genome", "blastn", "65697", "872", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter cinaedi"], [4135904, "PRJNA1160211_S_NODE_118604_length_423_cov_13.700000_g117375_i0", "PRJNA1160211", "118604", "423", "13.7", "57.951", "Campylobacter showae", "204", "Bacteria", "Bacteria", "608", "1.929999999999999e-169", "", "NTclustered", "gi|1483583565|emb|LT631545.1|", "204", "g117375", "i0", "93.827", "9.59574468085106", "405", "23", "96", "2", "20", "423", "1058351", "1057948", "Campylobacter showae strain B32_SW genome assembly, chromosome: I", "blastn", "4059", "608", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter showae"], [4866608, "PRJNA1160211_S_NODE_235344_length_274_cov_4057.686567_g234111_i0", "PRJNA1160211", "235344", "274", "4057.686567", "11118.06119358", "Campylobacter", "194", "Bacteria", "Bacteria", "484", "2.0899999999999994e-132", "", "NTclustered", "gi|1830377743|gb|MT323075.1|", "203", "g234111", "i0", "98.54", "111.704379562044", "274", "4", "100", "0", "1", "274", "238", "511", "Campylobacter rectus strain KCOM 3166 (=JS273) 16S ribosomal RNA gene, partial sequence", "blastn", "30607", "484", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter rectus"], [5413043, "PRJNA1160211_S_NODE_244885_length_266_cov_2.165803_g243652_i0", "PRJNA1160211", "244885", "266", "2.165803", "5.76103598", "Campylobacter ureolyticus", "827", "Bacteria", "Bacteria", "438", "1.6e-118", "", "NTclustered", "gi|1966876394|gb|CP068487.1|", "827", "g243652", "i0", "99.177", "8.07518796992481", "243", "2", "91", "0", "23", "265", "1451506", "1451264", "Campylobacter ureolyticus strain FDAARGOS_1102 chromosome", "blastn", "2148", "438", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter ureolyticus"], [6687898, "PRJNA1160211_S_NODE_239066_length_271_cov_2.722222_g237833_i0", "PRJNA1160211", "239066", "271", "2.722222", "7.37722162", "Campylobacter showae", "204", "Bacteria", "Bacteria", "274", "4.87e-69", "", "NTclustered", "gi|1483583565|emb|LT631545.1|", "204", "g237833", "i0", "87.2", "40.8671586715867", "250", "21", "92", "6", "1", "248", "501683", "501443", "Campylobacter showae strain B32_SW genome assembly, chromosome: I", "blastn", "11075", "274", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter showae"], [6688389, "PRJNA1160211_S_NODE_38806_length_614_cov_6.129390_g37672_i0", "PRJNA1160211", "38806", "614", "6.12939", "37.6344546", "Campylobacter showae", "204", "Bacteria", "Bacteria", "1040", "0", "", "NTclustered", "gi|1483583526|emb|LT631450.1|", "204", "g37672", "i0", "98.316", "8.81107491856678", "594", "8", "96", "2", "23", "614", "40647", "40054", "Campylobacter showae strain 129_VTPPs genome assembly, chromosome: I", "blastn", "5410", "1040", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter showae"], [7416551, "PRJNA1160211_S_NODE_252266_length_260_cov_1.620321_g251033_i0", "PRJNA1160211", "252266", "260", "1.620321", "4.2128346", "root", "1", "Root_unresolved", "Root_unresolved", "481", "2.55e-131", "", "NTclustered", "gi|2562786027|gb|CP120256.1|", "197", "g251033", "i0", "100", "102.007692307692", "260", "0", "100", "0", "1", "260", "1303534", "1303793", "Campylobacter jejuni strain PS_41_2021 chromosome, complete genome", "blastn", "26522", "481", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter jejuni"], [10513072, "PRJNA1160211_S_NODE_150709_length_373_cov_33.343333_g149476_i0", "PRJNA1160211", "150709", "373", "33.343333", "124.37063209", "Campylobacter showae", "204", "Bacteria", "Bacteria", "636", "7.699999999999998e-178", "", "NTclustered", "gi|1483583525|emb|LT631449.1|", "204", "g149476", "i0", "99.429", "98.7184986595174", "350", "2", "94", "0", "1", "350", "148097", "148446", "Campylobacter showae strain 129_VTPPs genome assembly, chromosome: I", "blastn", "36822", "636", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter showae"], [10514256, "PRJNA1160211_S_NODE_53129_length_566_cov_32.182556_g51958_i0", "PRJNA1160211", "53129", "566", "32.182556", "182.15326696", "Campylobacter showae", "204", "Bacteria", "Bacteria", "963", "0", "", "NTclustered", "gi|1483583565|emb|LT631545.1|", "204", "g51958", "i0", "99.25", "33.7243816254417", "533", "4", "94", "0", "11", "543", "1782108", "1782640", "Campylobacter showae strain B32_SW genome assembly, chromosome: I", "blastn", "19088", "963", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter showae"], [10514373, "PRJNA1160211_S_NODE_68049_length_526_cov_21.869757_g66845_i0", "PRJNA1160211", "68049", "526", "21.869757", "115.03492182", "Campylobacter showae", "204", "Bacteria", "Bacteria", "902", "0", "", "NTclustered", "gi|1483583525|emb|LT631449.1|", "204", "g66845", "i0", "99.796", "4.6958174904943", "491", "1", "93", "0", "20", "510", "1155574", "1155084", "Campylobacter showae strain 129_VTPPs genome assembly, chromosome: I", "blastn", "2470", "902", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter showae"], [12516819, "PRJNA1160211_S_NODE_112210_length_434_cov_55.933518_g110981_i0", "PRJNA1160211", "112210", "434", "55.933518", "242.75146812", "Campylobacter", "194", "Bacteria", "Bacteria", "795", "0", "", "NTclustered", "gi|1483583505|emb|LT631429.1|", "204", "g110981", "i0", "99.769", "103.599078341014", "433", "1", "99", "0", "2", "434", "33888", "33456", "Campylobacter showae genome assembly, plasmid: V", "blastn", "44962", "795", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter showae"], [13063240, "PRJNA1160211_S_NODE_190331_length_322_cov_2.032129_g189098_i0", "PRJNA1160211", "190331", "322", "2.032129", "6.54345538", "Campylobacter ureolyticus", "827", "Bacteria", "Bacteria", "568", "2.4299999999999993e-157", "", "NTclustered", "gi|909715533|gb|CP012195.1|", "1032069", "g189098", "i0", "98.447", "39.4937888198758", "322", "5", "100", "0", "1", "322", "992225", "991904", "Campylobacter ureolyticus RIGS 9880 chromosome, complete genome", "blastn", "12717", "568", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter ureolyticus"], [14338669, "PRJNA1160211_S_NODE_198372_length_312_cov_11.435146_g197139_i0", "PRJNA1160211", "198372", "312", "11.435146", "35.67765552", "Campylobacter showae", "204", "Bacteria", "Bacteria", "492", "1.45e-134", "", "NTclustered", "gi|1483583495|emb|LT631419.1|", "204", "g197139", "i0", "97.241", "10.8141025641026", "290", "8", "93", "0", "1", "290", "259562", "259273", "Campylobacter showae genome assembly, chromosome: I", "blastn", "3374", "492", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter showae"], [15612656, "PRJNA1160211_S_NODE_224773_length_284_cov_5870.995261_g223540_i0", "PRJNA1160211", "224773", "284", "5870.995261", "16673.62654124", "Candidatus Thiovulum stygium", "2951083", "Bacteria", "Bacteria", "459", "1.3199999999999998e-124", "", "NTclustered", "gi|2182967327|gb|CP091137.1|", "2951083", "g223540", "i0", "95.775", "207.12676056338", "284", "12", "100", "0", "1", "284", "565069", "565352", "MAG: Candidatus Thiovulum stygium isolate 07-Movile_MetG_Ill chromosome, complete genome", "blastn", "58824", "459", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Sulfurimonadaceae", "Thiovulum", "Candidatus Thiovulum stygium"], [15613491, "PRJNA1160211_S_NODE_72473_length_515_cov_19.151584_g71264_i0", "PRJNA1160211", "72473", "515", "19.151584", "98.6306576", "Campylobacter concisus", "199", "Bacteria", "Bacteria", "756", "0", "", "NTclustered", "gi|1938715890|gb|CP049263.1|", "199", "g71264", "i0", "98.152", "21.7242718446602", "433", "8", "84", "0", "18", "450", "297027", "297459", "Campylobacter concisus strain H16O-S1 chromosome, complete genome", "blastn", "11188", "756", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter concisus"], [16886093, "PRJNA1160211_S_NODE_107914_length_442_cov_5.135501_g106686_i0", "PRJNA1160211", "107914", "442", "5.135501", "22.69891442", "Campylobacter ureolyticus", "827", "Bacteria", "Bacteria", "632", "1.2e-176", "", "NTclustered", "gi|1829985141|gb|CP050963.1|", "827", "g106686", "i0", "96.825", "15.0452488687783", "378", "12", "86", "0", "65", "442", "389118", "389495", "Campylobacter ureolyticus strain FDAARGOS_673 chromosome", "blastn", "6650", "632", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter ureolyticus"], [17615891, "PRJNA1160211_S_NODE_121334_length_419_cov_2.537572_g120105_i0", "PRJNA1160211", "121334", "419", "2.537572", "10.63242668", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "89.8", "3.07e-13", "", "NTclustered", "gi|2166246099|dbj|LC663122.1|", "2026809", "g120105", "i0", "100", "88.2840095465394", "48", "0", "11", "0", "372", "419", "8281", "8328", "Epsilonproteobacteria bacterium ARSSAG-00002389 DNA, putative prophage region, clone: 00002389_pp1", "blastn", "36991", "89.8", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", null, null, null, null, "Campylobacterota bacterium"], [17616722, "PRJNA1160211_S_NODE_63754_length_537_cov_10.178879_g62561_i0", "PRJNA1160211", "63754", "537", "10.178879", "54.66058023", "Campylobacter", "194", "Bacteria", "Bacteria", "891", "0", "", "NTclustered", "gi|1938730527|gb|CP049274.1|", "199", "g62561", "i0", "97.697", "15.4134078212291", "521", "6", "97", "2", "2", "521", "86684", "86169", "Campylobacter concisus strain P10CDO-S2 chromosome, complete genome", "blastn", "8277", "896", "0.994419642857143", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter concisus"], [18161259, "PRJNA1160211_S_NODE_193175_length_318_cov_22.991837_g191942_i0", "PRJNA1160211", "193175", "318", "22.991837", "73.11404166", "Campylobacter showae", "204", "Bacteria", "Bacteria", "466", "8.98e-127", "", "NTclustered", "gi|1622747600|gb|CP012544.1|", "204", "g191942", "i0", "96.14", "9.88993710691824", "285", "11", "90", "0", "22", "306", "167111", "166827", "Campylobacter showae strain ATCC 51146 chromosome, complete genome", "blastn", "3145", "466", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter showae"], [18161557, "PRJNA1160211_S_NODE_23135_length_689_cov_7.193182_g22101_i0", "PRJNA1160211", "23135", "689", "7.193182", "49.56102398", "Campylobacter showae", "204", "Bacteria", "Bacteria", "1240", "0", "", "NTclustered", "gi|1483583525|emb|LT631449.1|", "204", "g22101", "i0", "99.559", "11.2641509433962", "681", "2", "99", "1", "9", "689", "955555", "956234", "Campylobacter showae strain 129_VTPPs genome assembly, chromosome: I", "blastn", "7761", "1240", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter showae"], [18161694, "PRJNA1160211_S_NODE_250875_length_261_cov_1.989362_g249642_i0", "PRJNA1160211", "250875", "261", "1.989362", "5.19223482", "Campylobacter ureolyticus", "827", "Bacteria", "Bacteria", "477", "3.3099999999999986e-130", "", "NTclustered", "gi|909715533|gb|CP012195.1|", "1032069", "g249642", "i0", "99.617", "4", "261", "1", "100", "0", "1", "261", "114114", "114374", "Campylobacter ureolyticus RIGS 9880 chromosome, complete genome", "blastn", "1044", "477", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter ureolyticus"], [18890601, "PRJNA1160211_S_NODE_76915_length_505_cov_7.219907_g75700_i0", "PRJNA1160211", "76915", "505", "7.219907", "36.46053035", "Campylobacter", "194", "Bacteria", "Bacteria", "529", "1.8699999999999994e-145", "", "NTclustered", "gi|240265854|gb|GQ167691.1|", "827", "g75700", "i0", "87.973", "238.926732673267", "449", "52", "89", "2", "21", "469", "1", "447", "Bacteroides ureolyticus strain UNSWE 23S ribosomal RNA gene, partial sequence", "blastn", "120658", "529", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter ureolyticus"], [18890669, "PRJNA1160211_S_NODE_91295_length_474_cov_15.089776_g90072_i0", "PRJNA1160211", "91295", "474", "15.089776", "71.52553824", "Campylobacter", "194", "Bacteria", "Bacteria", "806", "0", "", "NTclustered", "gi|1483583501|emb|LT631425.1|", "204", "g90072", "i0", "100", "5.53164556962025", "436", "0", "92", "0", "13", "448", "10389", "9954", "Campylobacter showae genome assembly, plasmid: I", "blastn", "2622", "806", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter showae"], [19435467, "PRJNA1160211_S_NODE_175256_length_340_cov_8.101124_g174023_i0", "PRJNA1160211", "175256", "340", "8.101124", "27.5438216", "Campylobacter concisus", "199", "Bacteria", "Bacteria", "542", "1.56e-149", "", "NTclustered", "gi|1938715890|gb|CP049263.1|", "199", "g174023", "i0", "97.476", "19.6117647058824", "317", "8", "93", "0", "24", "340", "1694145", "1693829", "Campylobacter concisus strain H16O-S1 chromosome, complete genome", "blastn", "6668", "542", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter concisus"], [19436710, "PRJNA1160211_S_NODE_73456_length_513_cov_6.315909_g72244_i0", "PRJNA1160211", "73456", "513", "6.315909", "32.40061317", "Campylobacter gracilis", "824", "Bacteria", "Bacteria", "911", "0", "", "NTclustered", "gi|909717139|gb|CP012196.1|", "824", "g72244", "i0", "99.402", "11.7387914230019", "502", "3", "98", "0", "12", "513", "1873368", "1872867", "Campylobacter gracilis strain ATCC 33236, complete genome", "blastn", "6022", "911", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter gracilis"], [20165083, "PRJNA1160211_S_NODE_28476_length_659_cov_34.948805_g27385_i0", "PRJNA1160211", "28476", "659", "34.948805", "230.31262494999999", "Campylobacter", "194", "Bacteria", "Bacteria", "1109", "0", "", "NTclustered", "gi|1829985141|gb|CP050963.1|", "827", "g27385", "i0", "98.262", "3.85280728376328", "633", "11", "96", "0", "6", "638", "1413097", "1412465", "Campylobacter ureolyticus strain FDAARGOS_673 chromosome", "blastn", "2539", "1109", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter ureolyticus"], [20165161, "PRJNA1160211_S_NODE_33556_length_635_cov_21.921708_g32444_i0", "PRJNA1160211", "33556", "635", "21.921708", "139.2028458", "Campylobacter", "194", "Bacteria", "Bacteria", "950", "0", "", "NTclustered", "gi|1721134170|emb|LR698972.1|", "200", "g32444", "i0", "94.893", "1.91181102362205", "607", "31", "96", "0", "9", "615", "1464818", "1465424", "Campylobacter curvus isolate MGYG-HGUT-01706 genome assembly, chromosome: 1", "blastn", "1214", "950", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter curvus"], [20711567, "PRJNA1160211_S_NODE_266817_length_249_cov_2.903409_g265584_i0", "PRJNA1160211", "266817", "249", "2.903409", "7.22948841", "Campylobacter concisus", "199", "Bacteria", "Bacteria", "405", "1.5e-108", "", "NTclustered", "gi|2699822930|gb|CP147773.1|", "199", "g265584", "i0", "99.115", "18.4698795180723", "226", "1", "91", "1", "24", "249", "1093603", "1093379", "Campylobacter concisus strain RMIT-O23 chromosome", "blastn", "4599", "405", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter concisus"], [20711706, "PRJNA1160211_S_NODE_289177_length_233_cov_2.318750_g287944_i0", "PRJNA1160211", "289177", "233", "2.31875", "5.4026875", "Arcobacter ellisii", "913109", "Bacteria", "Bacteria", "52.8", "0.021", "", "NTclustered", "gi|1474793334|gb|CP032097.1|", "913109", "g287944", "i0", "100", "0.120171673819742", "28", "0", "12", "0", "81", "108", "2310500", "2310527", "Arcobacter ellisii strain LMG 26155 chromosome, complete genome", "blastn", "28", "52.8", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Arcobacteraceae", "Arcobacter", "Arcobacter ellisii"], [21440360, "PRJNA1160211_S_NODE_200237_length_310_cov_5.852321_g199004_i0", "PRJNA1160211", "200237", "310", "5.852321", "18.1421951", "Campylobacter", "194", "Bacteria", "Bacteria", "529", "1.0999999999999996e-145", "", "NTclustered", "gi|1483583507|emb|LT631431.1|", "204", "g199004", "i0", "100", "6.09032258064516", "286", "0", "92", "0", "1", "286", "26243", "25958", "Campylobacter showae genome assembly, plasmid: VII", "blastn", "1888", "529", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter showae"], [21987265, "PRJNA1160211_S_NODE_46878_length_586_cov_6.304094_g45720_i0", "PRJNA1160211", "46878", "586", "6.304094", "36.94199084", "Campylobacter rectus", "203", "Bacteria", "Bacteria", "924", "0", "", "NTclustered", "gi|1622745323|gb|CP012543.1|", "203", "g45720", "i0", "95.205", "10.962457337884", "584", "28", "99", "0", "3", "586", "1515360", "1514777", "Campylobacter rectus strain ATCC 33238, complete genome", "blastn", "6424", "924", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter rectus"], [21987667, "PRJNA1160211_S_NODE_94658_length_468_cov_1.936709_g93433_i0", "PRJNA1160211", "94658", "468", "1.936709", "9.06379812", "Campylobacter ureolyticus", "827", "Bacteria", "Bacteria", "732", "0", "", "NTclustered", "gi|909715533|gb|CP012195.1|", "1032069", "g93433", "i0", "94.872", "3", "468", "24", "100", "0", "1", "468", "344537", "344070", "Campylobacter ureolyticus RIGS 9880 chromosome, complete genome", "blastn", "1404", "732", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter ureolyticus"], [23261360, "PRJNA1160211_S_NODE_132979_length_400_cov_5.544343_g131747_i0", "PRJNA1160211", "132979", "400", "5.544343", "22.177372", "Campylobacter ureolyticus", "827", "Bacteria", "Bacteria", "697", "0", "", "NTclustered", "gi|1966876394|gb|CP068487.1|", "827", "g131747", "i0", "99.737", "53.4375", "380", "1", "95", "0", "1", "380", "1169764", "1169385", "Campylobacter ureolyticus strain FDAARGOS_1102 chromosome", "blastn", "21375", "697", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter ureolyticus"], [23261949, "PRJNA1160211_S_NODE_206519_length_303_cov_5.543478_g205286_i0", "PRJNA1160211", "206519", "303", "5.543478", "16.79673834", "Campylobacter showae", "204", "Bacteria", "Bacteria", "372", "1.91e-98", "", "NTclustered", "gi|1622747600|gb|CP012544.1|", "204", "g205286", "i0", "90.714", "6.47524752475248", "280", "25", "92", "1", "24", "303", "370620", "370898", "Campylobacter showae strain ATCC 51146 chromosome, complete genome", "blastn", "1962", "372", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter showae"], [23991038, "PRJNA1160211_S_NODE_35979_length_625_cov_9.021739_g34853_i0", "PRJNA1160211", "35979", "625", "9.021739", "56.38586875", "Campylobacter", "194", "Bacteria", "Bacteria", "1088", "0", "", "NTclustered", "gi|1483583509|emb|LT631433.1|", "204", "g34853", "i0", "99.012", "7.2432", "607", "6", "97", "0", "1", "607", "1446", "840", "Campylobacter showae genome assembly, plasmid: IX", "blastn", "4527", "1094", "0.994515539305302", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter showae"], [28417962, "PRJNA1160211_S_NODE_288926_length_233_cov_3.368750_g287693_i0", "PRJNA1160211", "288926", "233", "3.36875", "7.8491875", "root", "1", "Root_unresolved", "Root_unresolved", "44.7", "0.00611", "", "NR", "GAA6795622.1", "210", "g287693", "i0", "47.2", "6.6824034334764", "36", "19", "46.4", "0", "65", "172", "122", "157", "GAA6795622.1 hypothetical protein Kyoto200A_0460 [Helicobacter pylori]", "diamond", "1557", "44.7", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [28512439, "PRJNA1160211_S_NODE_229347_length_280_cov_3.202899_g228114_i0", "PRJNA1160211", "229347", "280", "3.202899", "8.9681172", "Campylobacter", "194", "Bacteria", "Bacteria", "98.2", "1.73e-22", "", "NR", "WP_314991748.1", "218934", "g228114", "i0", "51.6", "1.99285714285714", "93", "45", "99.6", "0", "2", "280", "187", "279", "WP_314991748.1 type I restriction-modification enzyme R subunit C-terminal domain-containing protein, partial [uncultured Campylobacter sp.]", "diamond", "558", "98.6", "0.995943204868154", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "uncultured Campylobacter sp."], [29314116, "PRJNA1160211_S_NODE_214729_length_295_cov_0.986486_g213496_i0", "PRJNA1160211", "214729", "295", "0.986486", "2.9101337", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "82.4", "2.31e-18", "", "NR", "GAA9209002.1", "210", "g213496", "i0", "94.6", "0.376271186440678", "37", "2", "37.6", "0", "133", "243", "1", "37", "GAA9209002.1 hypothetical protein Kyoto198A_1420 [Helicobacter pylori]", "diamond", "111", "82.4", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [29692631, "PRJNA1160211_S_NODE_137370_length_393_cov_6.550000_g136138_i0", "PRJNA1160211", "137370", "393", "6.55", "25.7415", "Campylobacter ureolyticus", "827", "Bacteria", "Bacteria", "252", "3.48e-81", "", "NR", "WP_016646459.1", "827", "g136138", "i0", "98.5", "1", "131", "2", "100", "0", "393", "1", "179", "309", "WP_016646459.1 type II asparaginase [Campylobacter ureolyticus]", "diamond", "393", "252", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter ureolyticus"], [31051736, "PRJNA1160211_S_NODE_133455_length_399_cov_12.395706_g132223_i0", "PRJNA1160211", "133455", "399", "12.395706", "49.45886694", "Campylobacterota bacterium", "2026809", "Bacteria", "Bacteria", "75.1", "4.73e-13", "", "NR", "MCL4431196.1", "2026809", "g132223", "i0", "50", "0.661654135338346", "88", "32", "65.4", "2", "77", "337", "159", "235", "MCL4431196.1 hypothetical protein [Campylobacterota bacterium]", "diamond", "264", "75.1", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", null, null, null, null, "Campylobacterota bacterium"], [32632490, "PRJNA1160211_S_NODE_257180_length_256_cov_1.683060_g255947_i0", "PRJNA1160211", "257180", "256", "1.68306", "4.3086336", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "63.9", "1.62e-11", "", "NR", "WP_316480680.1", "210", "g255947", "i0", "92.6", "0.31640625", "27", "2", "31.6", "0", "134", "214", "1", "27", "WP_316480680.1 hypothetical protein [Helicobacter pylori]", "diamond", "81", "63.9", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [32664044, "PRJNA1160211_S_NODE_254520_length_258_cov_1.994595_g253287_i0", "PRJNA1160211", "254520", "258", "1.994595", "5.1460551", "Helicobacter sp. 12S", "218", "Bacteria", "Bacteria", "73.6", "6.2e-13", "", "NR", "WP_257875431.1", "1476197", "g253287", "i0", "57.9", "1.32558139534884", "57", "24", "66.3", "0", "173", "3", "1", "57", "WP_257875431.1 acetate--CoA ligase family protein [Helicobacter sp. 12S02232-10]", "diamond", "342", "73.6", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter sp. 12S02232-10"]], "truncated": false, "filtered_table_rows_count": 46, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_kingdom\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA1160211", "p1": "Pseudomonadati", "p2": "Campylobacterota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1160211&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [{"value": "PRJNA1160211", "label": "PRJNA1160211", "count": 46, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1160211&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [{"value": "blastn", "label": "blastn", "count": 39, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1160211&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota&analysis=blastn", "selected": false}, {"value": "diamond", "label": "diamond", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1160211&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota&analysis=diamond", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1160211&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 46, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1160211&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1160211&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1160211&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 46, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1160211&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1160211&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [{"value": "Campylobacterota", "label": "Campylobacterota", "count": 46, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1160211&tax_kingdom=Pseudomonadati", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 387.51201299601234}