{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA1158727\", tax_clade = \"PVC group\" and tax_phylum = \"Verrucomicrobiota\"", "rows": [[303549, "PRJNA1158727_P_NODE_122061_length_265_cov_1.260417_g114600_i0", "PRJNA1158727", "122061", "265", "1.260417", "3.34010505", "Verrucomicrobiales bacterium", "2026801", "Bacteria", "Bacteria", "107", "1.26e-24", "", "NR", "MFM7181164.1", "2026801", "g114600", "i0", "64.2", "1.91320754716981", "81", "29", "91.7", "0", "264", "22", "3523", "3603", "MFM7181164.1 filamentous hemagglutinin family protein [Verrucomicrobiales bacterium]", "diamond", "507", "107", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", null, null, "Verrucomicrobiales bacterium"], [2855194, "PRJNA1158727_P_NODE_157143_length_243_cov_0.905882_g149681_i0", "PRJNA1158727", "157143", "243", "0.905882", "2.20129326", "Opitutaceae bacterium", "2006848", "Bacteria", "Bacteria", "134", "1.67e-34", "", "NR", "HEX9784308.1", "2006848", "g149681", "i0", "78.8", "4.9382716049382704", "80", "17", "98.8", "0", "241", "2", "375", "454", "HEX9784308.1 isoleucine--tRNA ligase [Opitutaceae bacterium]", "diamond", "1200", "134", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Opitutia", "Opitutales", "Opitutaceae", null, "Opitutaceae bacterium"], [9965696, "PRJNA1158727_P_NODE_143908_length_248_cov_0.880000_g136446_i0", "PRJNA1158727", "143908", "248", "0.88", "2.1824", "Opitutia bacterium", "2026771", "Bacteria", "Bacteria", "110", "2.9e-27", "", "NR", "MBI5423102.1", "2026771", "g136446", "i0", "77.9", "1.64516129032258", "68", "15", "82.3", "0", "247", "44", "13", "80", "MBI5423102.1 pantoate--beta-alanine ligase [Opitutia bacterium]", "diamond", "408", "110", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Opitutia", null, null, null, "Opitutia bacterium"], [11782523, "PRJNA1158727_P_NODE_135670_length_251_cov_0.865169_g128208_i0", "PRJNA1158727", "135670", "251", "0.865169", "2.17157419", "Roseimicrobium sp. ORNL1", "2711231", "Bacteria", "Bacteria", "226", "1.2699999999999999e-54", "", "NTclustered", "gi|1815841271|gb|CP049143.1|", "2711231", "g128208", "i0", "83.004", "3.25498007968128", "253", "39", "100", "4", "1", "251", "7901533", "7901283", "Roseimicrobium sp. ORNL1 chromosome, complete genome", "blastn", "817", "226", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", "Roseimicrobium", "Roseimicrobium sp. ORNL1"], [27281057, "PRJNA1158727_P_NODE_144063_length_248_cov_0.880000_g136601_i0", "PRJNA1158727", "144063", "248", "0.88", "2.1824", "Prosthecobacter", "48463", "Bacteria", "Bacteria", "159", "4.27e-43", "", "NR", "WP_294380376.1", "1965333", "g136601", "i0", "89", "14.8548387096774", "82", "9", "99.2", "0", "2", "247", "802", "883", "WP_294380376.1 sulfatase-like hydrolase/transferase [Prosthecobacter sp.]", "diamond", "3684", "160", "0.99375", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", "Prosthecobacter", "Prosthecobacter sp."], [27293190, "PRJNA1158727_P_NODE_106103_length_284_cov_1.473934_g98642_i0", "PRJNA1158727", "106103", "284", "1.473934", "4.18597256", "Chthoniobacterales bacterium", "2201154", "Bacteria", "Bacteria", "112", "4.66e-28", "", "NR", "HEY8903241.1", "2201154", "g98642", "i0", "58.5", "3.97183098591549", "94", "39", "99.3", "0", "2", "283", "67", "160", "HEY8903241.1 SDR family oxidoreductase [Chthoniobacterales bacterium]", "diamond", "1128", "112", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Spartobacteria", "Chthoniobacterales", null, null, "Chthoniobacterales bacterium"], [27735609, "PRJNA1158727_P_NODE_115144_length_273_cov_1.520000_g107683_i0", "PRJNA1158727", "115144", "273", "1.52", "4.1496", "Candidatus Udaeobacter sp.", "2665650", "Bacteria", "Bacteria", "158", "8.82e-43", "", "NR", "HEY2569136.1", "2665650", "g107683", "i0", "92.2", "0.989010989010989", "90", "7", "98.9", "0", "272", "3", "341", "430", "HEY2569136.1 ABC transporter permease [Candidatus Udaeobacter sp.]", "diamond", "270", "158", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Spartobacteria", "Chthoniobacterales", "Chthoniobacteraceae", "Candidatus Udaeobacter", "Candidatus Udaeobacter sp."], [28335199, "PRJNA1158727_P_NODE_122026_length_265_cov_1.317708_g114565_i0", "PRJNA1158727", "122026", "265", "1.317708", "3.4919262", "Verrucomicrobiota bacterium", "2026799", "Bacteria", "Bacteria", "82", "7.08e-16", "", "NR", "KAB2638976.1", "2026799", "g114565", "i0", "67.3", "2.49056603773585", "55", "18", "62.3", "0", "263", "99", "603", "657", "KAB2638976.1 MAG: transketolase [Verrucomicrobiota bacterium]", "diamond", "660", "82", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"], [28651017, "PRJNA1158727_P_NODE_157687_length_243_cov_0.905882_g150225_i0", "PRJNA1158727", "157687", "243", "0.905882", "2.20129326", "Luteolibacter sp. LG18", "2819286", "Bacteria", "Bacteria", "98.6", "5.79e-22", "", "NR", "WP_338288885.1", "2819286", "g150225", "i0", "82", "1.50617283950617", "61", "11", "75.3", "0", "2", "184", "411", "471", "WP_338288885.1 hypothetical protein [Luteolibacter sp. LG18]", "diamond", "366", "98.6", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", "Luteolibacter", "Luteolibacter sp. LG18"], [28777169, "PRJNA1158727_P_NODE_141647_length_249_cov_0.875000_g134185_i0", "PRJNA1158727", "141647", "249", "0.875", "2.17875", "Prosthecobacter debontii", "48467", "Bacteria", "Bacteria", "164", "4.08e-45", "", "NR", "WP_078812045.1", "48467", "g134185", "i0", "97.6", "1", "83", "2", "100", "0", "249", "1", "566", "648", "WP_078812045.1 vWA domain-containing protein [Prosthecobacter debontii]", "diamond", "249", "164", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", "Prosthecobacter", "Prosthecobacter debontii"], [29219442, "PRJNA1158727_P_NODE_108889_length_281_cov_1.173077_g101428_i0", "PRJNA1158727", "108889", "281", "1.173077", "3.29634637", "Verrucomicrobiota bacterium", "2026799", "Bacteria", "Bacteria", "132", "2.51e-33", "", "NR", "MBI5687343.1", "2026799", "g101428", "i0", "67.7", "3.96085409252669", "93", "29", "98.2", "1", "4", "279", "586", "678", "MBI5687343.1 DUF4838 domain-containing protein [Verrucomicrobiota bacterium]", "diamond", "1113", "132", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"], [30040320, "PRJNA1158727_P_NODE_138731_length_250_cov_0.870056_g131269_i0", "PRJNA1158727", "138731", "250", "0.870056", "2.17514", "Verrucomicrobiaceae bacterium", "2026800", "Bacteria", "Bacteria", "176", "4.14e-51", "", "NR", "RYD49461.1", "2026800", "g131269", "i0", "96.4", "1.992", "83", "3", "99.6", "0", "2", "250", "322", "404", "RYD49461.1 MAG: carbohydrate porin [Verrucomicrobiaceae bacterium]", "diamond", "498", "176", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", null, "Verrucomicrobiaceae bacterium"], [30261736, "PRJNA1158727_P_NODE_106372_length_284_cov_1.327014_g98911_i0", "PRJNA1158727", "106372", "284", "1.327014", "3.76871976", "Chthoniobacter sp.", "2510640", "Bacteria", "Bacteria", "92.8", "5.65e-22", "", "NR", "WP_348544159.1", "2510640", "g98911", "i0", "60.5", "0.802816901408451", "76", "29", "79.2", "1", "226", "2", "17", "92", "WP_348544159.1 hypothetical protein [Chthoniobacter sp.]", "diamond", "228", "92.8", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Spartobacteria", "Chthoniobacterales", "Chthoniobacteraceae", "Chthoniobacter", "Chthoniobacter sp."], [30608931, "PRJNA1158727_P_NODE_141633_length_249_cov_0.875000_g134171_i0", "PRJNA1158727", "141633", "249", "0.875", "2.17875", "Verrucomicrobiales bacterium", "2026801", "Bacteria", "Bacteria", "45.1", "0.00586", "", "NR", "MDF1753436.1", "2026801", "g134171", "i0", "34.2", "0.91566265060241", "76", "41", "88", "2", "6", "224", "330", "399", "MDF1753436.1 hypothetical protein [Verrucomicrobiales bacterium]", "diamond", "228", "45.1", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", null, null, "Verrucomicrobiales bacterium"], [30956794, "PRJNA1158727_P_NODE_149954_length_246_cov_0.890173_g142492_i0", "PRJNA1158727", "149954", "246", "0.890173", "2.18982558", "Verrucomicrobiota bacterium", "2026799", "Bacteria", "Bacteria", "127", "9.999999999999999e-34", "", "NR", "MES2921495.1", "2026799", "g142492", "i0", "75.6", "4.98780487804878", "82", "20", "100", "0", "246", "1", "109", "190", "MES2921495.1 GH25 family lysozyme [Verrucomicrobiota bacterium]", "diamond", "1227", "127", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"], [31208912, "PRJNA1158727_P_NODE_119535_length_268_cov_1.184615_g112074_i0", "PRJNA1158727", "119535", "268", "1.184615", "3.1747682", "Verrucomicrobiaceae bacterium", "2026800", "Bacteria", "Bacteria", "145", "2.5499999999999998e-40", "", "NR", "RYD65414.1", "2026800", "g112074", "i0", "85.2", "0.985074626865672", "88", "13", "98.5", "0", "5", "268", "56", "143", "RYD65414.1 MAG: hypothetical protein EOP84_31955 [Verrucomicrobiaceae bacterium]", "diamond", "264", "145", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", null, "Verrucomicrobiaceae bacterium"], [31430700, "PRJNA1158727_P_NODE_118876_length_268_cov_3.733333_g111415_i0", "PRJNA1158727", "118876", "268", "3.733333", "10.00533244", "Verrucomicrobiales bacterium", "2026801", "Bacteria", "Bacteria", "77.4", "1.66e-14", "", "NR", "MBI60809.1", "2026801", "g111415", "i0", "50.7", "2.36194029850746", "69", "34", "77.2", "0", "62", "268", "108", "176", "MBI60809.1 phosphate starvation-inducible protein PhoH [Verrucomicrobiales bacterium]", "diamond", "633", "77.4", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", null, null, "Verrucomicrobiales bacterium"], [31873556, "PRJNA1158727_P_NODE_143497_length_248_cov_0.880000_g136035_i0", "PRJNA1158727", "143497", "248", "0.88", "2.1824", "Chthoniobacterales bacterium", "2201154", "Bacteria", "Bacteria", "157", "1.43e-42", "", "NR", "HEY3662717.1", "2201154", "g136035", "i0", "92.7", "0.991935483870968", "82", "6", "99.2", "0", "246", "1", "621", "702", "HEY3662717.1 protein kinase [Chthoniobacterales bacterium]", "diamond", "246", "157", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Spartobacteria", "Chthoniobacterales", null, null, "Chthoniobacterales bacterium"], [32190060, "PRJNA1158727_P_NODE_119678_length_268_cov_0.994872_g112217_i0", "PRJNA1158727", "119678", "268", "0.994872", "2.66625696", "Verrucomicrobiaceae bacterium", "2026800", "Bacteria", "Bacteria", "143", "1.42e-39", "", "NR", "RYD65414.1", "2026800", "g112217", "i0", "78.4", "0.985074626865672", "88", "19", "98.5", "0", "264", "1", "210", "297", "RYD65414.1 MAG: hypothetical protein EOP84_31955 [Verrucomicrobiaceae bacterium]", "diamond", "264", "143", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", null, "Verrucomicrobiaceae bacterium"], [32632412, "PRJNA1158727_P_NODE_142580_length_248_cov_1.577143_g135118_i0", "PRJNA1158727", "142580", "248", "1.577143", "3.91131464", "Chthoniobacteraceae bacterium", "2811408", "Bacteria", "Bacteria", "129", "1.58e-33", "", "NR", "HZJ14823.1", "2811408", "g135118", "i0", "69.5", "0.991935483870968", "82", "25", "99.2", "0", "3", "248", "187", "268", "HZJ14823.1 metallophosphoesterase family protein [Chthoniobacteraceae bacterium]", "diamond", "246", "129", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Spartobacteria", "Chthoniobacterales", "Chthoniobacteraceae", null, "Chthoniobacteraceae bacterium"], [32884403, "PRJNA1158727_P_NODE_111500_length_277_cov_3.348039_g104039_i0", "PRJNA1158727", "111500", "277", "3.348039", "9.27406803", "Verrucomicrobiaceae bacterium", "2026800", "Bacteria", "Bacteria", "87", "7.24e-18", "", "NR", "RYD71398.1", "2026800", "g104039", "i0", "49", "1.03971119133574", "96", "38", "98.6", "4", "275", "3", "169", "258", "RYD71398.1 MAG: hypothetical protein EOP84_24945, partial [Verrucomicrobiaceae bacterium]", "diamond", "288", "87", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", null, "Verrucomicrobiaceae bacterium"]], "truncated": false, "filtered_table_rows_count": 21, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA1158727", "p1": "PVC group", "p2": "Verrucomicrobiota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1158727&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "PRJNA1158727", "label": "PRJNA1158727", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1158727&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "diamond", "label": "diamond", "count": 20, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1158727&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1158727&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1158727&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1158727&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1158727&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "PVC group", "label": "PVC group", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1158727&tax_phylum=Verrucomicrobiota", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1158727&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1158727&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1158727&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "Verrucomicrobiota", "label": "Verrucomicrobiota", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1158727&tax_clade=PVC+group", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 256.5190119930776}