{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA1144090\", tax_clade = \"FCB group\" and tax_phylum = \"Gemmatimonadota\"", "rows": [[4114451, "PRJNA1144090_P_NODE_55804_length_340_cov_2.037453_g55269_i0", "PRJNA1144090", "55804", "340", "2.037453", "6.9273402", "uncultured Gemmatimonadales bacterium", "412054", "Bacteria", "Bacteria", "54.7", "0.009", "", "NTclustered", "gi|2874253978|emb|OY970303.1|", "412054", "g55269", "i0", "100", "0.423529411764706", "29", "0", "9", "0", "215", "243", "7334695", "7334667", "MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1", "blastn", "144", "54.7", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "uncultured Gemmatimonadales bacterium"], [26785837, "PRJNA1144090_P_NODE_60641_length_326_cov_1.561265_g60106_i0", "PRJNA1144090", "60641", "326", "1.561265", "5.0897239", "Gemmatimonadaceae bacterium", "2026741", "Bacteria", "Bacteria", "47.8", "0.00173", "", "NR", "HKV51836.1", "2026741", "g60106", "i0", "45", "0.552147239263804", "60", "30", "53.4", "2", "142", "315", "895", "953", "HKV51836.1 ankyrin repeat domain-containing protein [Gemmatimonadaceae bacterium]", "diamond", "180", "47.8", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", null, "Gemmatimonadaceae bacterium"], [26943832, "PRJNA1144090_P_NODE_52922_length_350_cov_1.808664_g52387_i0", "PRJNA1144090", "52922", "350", "1.808664", "6.330324", "Gemmatimonadota bacterium", "2026742", "Bacteria", "Bacteria", "75.1", "5.44e-13", "", "NR", "PYP23140.1", "2026742", "g52387", "i0", "39.1", "3.94285714285714", "115", "55", "98.6", "1", "6", "350", "24", "123", "PYP23140.1 MAG: sodium-translocating pyrophosphatase, partial [Gemmatimonadota bacterium]", "diamond", "1380", "75.1", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadota bacterium"], [27702649, "PRJNA1144090_P_NODE_59264_length_330_cov_1.198444_g58729_i0", "PRJNA1144090", "59264", "330", "1.198444", "3.9548652", "Gemmatimonadaceae bacterium", "2026741", "Bacteria", "Bacteria", "69.3", "4.79e-11", "", "NR", "HMA01782.1", "2026741", "g58729", "i0", "35.7", "5.09090909090909", "112", "63", "97.3", "3", "5", "325", "537", "644", "HMA01782.1 serine hydrolase [Gemmatimonadaceae bacterium]", "diamond", "1680", "69.3", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", null, "Gemmatimonadaceae bacterium"], [28081109, "PRJNA1144090_P_NODE_60945_length_325_cov_1.813492_g60410_i0", "PRJNA1144090", "60945", "325", "1.813492", "5.893849", "Gemmatimonadota bacterium", "2026742", "Bacteria", "Bacteria", "82.8", "2.52e-16", "", "NR", "MEK6609544.1", "2026742", "g60410", "i0", "45.3", "3.87692307692308", "106", "52", "97.8", "3", "320", "3", "21", "120", "MEK6609544.1 malate synthase A [Gemmatimonadota bacterium]", "diamond", "1260", "82.8", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadota bacterium"], [28333769, "PRJNA1144090_P_NODE_50186_length_360_cov_2.554007_g49651_i0", "PRJNA1144090", "50186", "360", "2.554007", "9.1944252", "Gemmatimonadaceae bacterium", "2026741", "Bacteria", "Bacteria", "164", "1.66e-44", "", "NR", "HXT48020.1", "2026741", "g49651", "i0", "68.8", "7.44166666666667", "112", "35", "93.3", "0", "359", "24", "618", "729", "HXT48020.1 aminomethyl-transferring glycine dehydrogenase [Gemmatimonadaceae bacterium]", "diamond", "2679", "164", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", null, "Gemmatimonadaceae bacterium"], [29218014, "PRJNA1144090_P_NODE_100789_length_250_cov_0.870056_g100254_i0", "PRJNA1144090", "100789", "250", "0.870056", "2.17514", "Longimicrobiales bacterium", "2910168", "Bacteria", "Bacteria", "85.9", "9.89e-18", "", "NR", "MDT8370069.1", "2910168", "g100254", "i0", "51.2", "2.004", "82", "36", "98.4", "3", "250", "5", "128", "205", "MDT8370069.1 peptidyl-alpha-hydroxyglycine alpha-amidating lyase family protein [Longimicrobiales bacterium]", "diamond", "501", "85.9", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Longimicrobiia", "Longimicrobiales", null, null, "Longimicrobiales bacterium"], [29312637, "PRJNA1144090_P_NODE_91649_length_262_cov_1.624339_g91114_i0", "PRJNA1144090", "91649", "262", "1.624339", "4.25576818", "Gemmatimonadota bacterium", "2026742", "Bacteria", "Bacteria", "62.4", "3.75e-9", "", "NR", "MCH9015900.1", "2026742", "g91114", "i0", "49.4", "1.77480916030534", "77", "35", "85.9", "2", "227", "3", "114", "188", "MCH9015900.1 SDR family oxidoreductase [Gemmatimonadota bacterium]", "diamond", "465", "62.4", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadota bacterium"], [30659740, "PRJNA1144090_P_NODE_114773_length_242_cov_0.911243_g114238_i0", "PRJNA1144090", "114773", "242", "0.911243", "2.20520806", "Gemmatimonas", "173479", "Bacteria", "Bacteria", "146", "2.06e-39", "", "NR", "WP_012682223.1", "173480", "g114238", "i0", "82.3", "14.8636363636364", "79", "14", "97.9", "0", "242", "6", "107", "185", "WP_012682223.1 methionine--tRNA ligase [Gemmatimonas aurantiaca]", "diamond", "3597", "147", "0.993197278911565", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatimonas", "Gemmatimonas aurantiaca"], [30860359, "PRJNA1144090_P_NODE_110314_length_244_cov_1.801170_g109779_i0", "PRJNA1144090", "110314", "244", "1.80117", "4.3948548", "Longimicrobium sp.", "2029185", "Bacteria", "Bacteria", "46.6", "0.00141", "", "NR", "HET7461886.1", "2029185", "g109779", "i0", "44.4", "1.34016393442623", "54", "26", "61.5", "1", "242", "93", "7", "60", "HET7461886.1 zinc ribbon domain-containing protein [Longimicrobium sp.]", "diamond", "327", "46.6", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Longimicrobiia", "Longimicrobiales", "Longimicrobiaceae", "Longimicrobium", "Longimicrobium sp."], [32220285, "PRJNA1144090_P_NODE_75578_length_290_cov_2.654378_g75043_i0", "PRJNA1144090", "75578", "290", "2.654378", "7.6976962", "Gemmatimonadales bacterium", "2448054", "Bacteria", "Bacteria", "90.5", "8.44e-19", "", "NR", "HEX9488130.1", "2448054", "g75043", "i0", "41.7", "3.97241379310345", "96", "55", "99.3", "1", "290", "3", "206", "300", "HEX9488130.1 multicopper oxidase family protein [Gemmatimonadales bacterium]", "diamond", "1152", "90.5", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "Gemmatimonadales bacterium"]], "truncated": false, "filtered_table_rows_count": 11, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA1144090", "p1": "FCB group", "p2": "Gemmatimonadota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1144090&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "PRJNA1144090", "label": "PRJNA1144090", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1144090&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "diamond", "label": "diamond", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1144090&tax_clade=FCB+group&tax_phylum=Gemmatimonadota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1144090&tax_clade=FCB+group&tax_phylum=Gemmatimonadota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1144090&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1144090&tax_clade=FCB+group&tax_phylum=Gemmatimonadota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1144090&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "FCB group", "label": "FCB group", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1144090&tax_phylum=Gemmatimonadota", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1144090&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1144090&tax_clade=FCB+group&tax_phylum=Gemmatimonadota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1144090&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "Gemmatimonadota", "label": "Gemmatimonadota", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1144090&tax_clade=FCB+group", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 430.8488750102697}