{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA1126661\", tax_clade = \"FCB group\" and tax_phylum = \"Gemmatimonadota\"", "rows": [[2833018, "PRJNA1126661_P_NODE_33363_length_301_cov_9.771930_g32834_i0", "PRJNA1126661", "33363", "301", "9.77193", "29.4135093", "Gemmatimonadaceae bacterium", "2026741", "Bacteria", "Bacteria", "80.1", "5.36e-15", "", "NR", "HEX6048367.1", "2026741", "g32834", "i0", "80.9", "0.46843853820598", "47", "9", "46.8", "0", "142", "2", "1", "47", "HEX6048367.1 FAD-dependent oxidoreductase [Gemmatimonadaceae bacterium]", "diamond", "141", "80.1", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", null, "Gemmatimonadaceae bacterium"], [7935210, "PRJNA1126661_P_NODE_21967_length_326_cov_3.596838_g21438_i0", "PRJNA1126661", "21967", "326", "3.596838", "11.72569188", "uncultured Gemmatimonadales bacterium", "412054", "Bacteria", "Bacteria", "132", "3.83e-26", "", "NTclustered", "gi|2874253755|emb|OY969695.1|", "412054", "g21438", "i0", "84.962", "6.68098159509202", "133", "16", "40", "4", "1", "131", "150200", "150070", "MAG: uncultured Gemmatimonadales bacterium isolate MFD04967.bin.1.34 genome assembly, chromosome: 1", "blastn", "2178", "132", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "uncultured Gemmatimonadales bacterium"], [10486240, "PRJNA1126661_P_NODE_65669_length_264_cov_4.345550_g65139_i0", "PRJNA1126661", "65669", "264", "4.34555", "11.472252", "Gemmatimonadaceae bacterium", "2026741", "Bacteria", "Bacteria", "119", "4.11e-29", "", "NR", "MFL5620983.1", "2026741", "g65139", "i0", "72.1", "0.977272727272727", "86", "24", "97.7", "0", "263", "6", "84", "169", "MFL5620983.1 ADOP family duplicated permease [Gemmatimonadaceae bacterium]", "diamond", "258", "119", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", null, "Gemmatimonadaceae bacterium"], [11234373, "PRJNA1126661_P_NODE_45689_length_299_cov_5.933628_g45160_i0", "PRJNA1126661", "45689", "299", "5.933628", "17.74154772", "Gemmatimonadaceae bacterium", "2026741", "Bacteria", "Bacteria", "96.7", "4.64e-21", "", "NR", "HEX7942347.1", "2026741", "g45160", "i0", "91.8", "1.97658862876254", "49", "4", "49.2", "0", "152", "298", "162", "210", "HEX7942347.1 amidohydrolase family protein [Gemmatimonadaceae bacterium]", "diamond", "591", "96.7", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", null, "Gemmatimonadaceae bacterium"], [15585452, "PRJNA1126661_P_NODE_47273_length_298_cov_5.257778_g46744_i0", "PRJNA1126661", "47273", "298", "5.257778", "15.66817844", "Longimicrobiales bacterium", "2910168", "Bacteria", "Bacteria", "74.3", "2.91e-13", "", "NR", "HWV58261.1", "2910168", "g46744", "i0", "80.9", "0.473154362416107", "47", "9", "47.3", "0", "1", "141", "127", "173", "HWV58261.1 NADP-dependent oxidoreductase [Longimicrobiales bacterium]", "diamond", "141", "74.3", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Longimicrobiia", "Longimicrobiales", null, null, "Longimicrobiales bacterium"], [18134638, "PRJNA1126661_P_NODE_84495_length_209_cov_4.588235_g83965_i0", "PRJNA1126661", "84495", "209", "4.588235", "9.58941115", "Longimicrobium sp.", "2029185", "Bacteria", "Bacteria", "115", "8.16e-28", "", "NR", "HYH81956.1", "2029185", "g83965", "i0", "76.8", "0.990430622009569", "69", "16", "99", "0", "207", "1", "2805", "2873", "HYH81956.1 amino acid adenylation domain-containing protein [Longimicrobium sp.]", "diamond", "207", "115", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Longimicrobiia", "Longimicrobiales", "Longimicrobiaceae", "Longimicrobium", "Longimicrobium sp."], [20157217, "PRJNA1126661_P_NODE_20636_length_326_cov_3.818182_g20107_i0", "PRJNA1126661", "20636", "326", "3.818182", "12.44727332", "Gemmatimonas sp. UBA7669", "1946568", "Bacteria", "Bacteria", "111", "3.73e-29", "", "NR", "WP_291160863.1", "1946568", "g20107", "i0", "100", "0.460122699386503", "50", "0", "46", "0", "1", "150", "26", "75", "WP_291160863.1 6-carboxytetrahydropterin synthase QueD [Gemmatimonas sp. UBA7669]", "diamond", "150", "111", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatimonas", "Gemmatimonas sp. UBA7669"], [21959175, "PRJNA1126661_P_NODE_35458_length_301_cov_5.899123_g34929_i0", "PRJNA1126661", "35458", "301", "5.899123", "17.75636023", "uncultured Gemmatimonadales bacterium", "412054", "Bacteria", "Bacteria", "117", "9.79e-22", "", "NTclustered", "gi|2874254107|emb|OY970192.1|", "412054", "g34929", "i0", "84.615", "26.0066445182724", "117", "18", "39", "0", "31", "147", "4861305", "4861421", "MAG: uncultured Gemmatimonadales bacterium isolate MFD01721.bin.c.5 genome assembly, chromosome: 1", "blastn", "7828", "117", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "uncultured Gemmatimonadales bacterium"], [24508239, "PRJNA1126661_P_NODE_25500_length_326_cov_3.114625_g24971_i0", "PRJNA1126661", "25500", "326", "3.114625", "10.1536775", "Gemmatimonadales bacterium", "2448054", "Bacteria", "Bacteria", "82.4", "4.7e-17", "", "NR", "HEX9055690.1", "2448054", "g24971", "i0", "78", "0.920245398773006", "50", "11", "46", "0", "150", "1", "13", "62", "HEX9055690.1 lipocalin family protein [Gemmatimonadales bacterium]", "diamond", "300", "82.4", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "Gemmatimonadales bacterium"], [26880658, "PRJNA1126661_P_NODE_7581_length_326_cov_12.075099_g7052_i0", "PRJNA1126661", "7581", "326", "12.075099", "39.36482274", "Gemmatimonas sp.", "1962908", "Bacteria", "Bacteria", "53.9", "1.19e-5", "", "NR", "MCO4098246.1", "1962908", "g7052", "i0", "58.3", "2.19938650306748", "48", "16", "43.3", "2", "186", "326", "24", "68", "MCO4098246.1 class I SAM-dependent DNA methyltransferase [Gemmatimonas sp.]", "diamond", "717", "53.9", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatimonas", "Gemmatimonas sp."], [28933560, "PRJNA1126661_P_NODE_19068_length_326_cov_4.090909_g18539_i0", "PRJNA1126661", "19068", "326", "4.090909", "13.33636334", "Gemmatimonadaceae bacterium", "2026741", "Bacteria", "Bacteria", "47.4", "7.62e-4", "", "NR", "HWJ21061.1", "2026741", "g18539", "i0", "90", "0.184049079754601", "20", "2", "18.4", "0", "1", "60", "96", "115", "HWJ21061.1 HNH endonuclease [Gemmatimonadaceae bacterium]", "diamond", "60", "47.4", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", null, "Gemmatimonadaceae bacterium"], [29028547, "PRJNA1126661_P_NODE_70048_length_253_cov_2.288889_g69518_i0", "PRJNA1126661", "70048", "253", "2.288889", "5.79088917", "Gemmatimonadaceae bacterium", "2026741", "Bacteria", "Bacteria", "43.1", "0.03", "", "NR", "HEY7234229.1", "2026741", "g69518", "i0", "33.3", "0.99604743083004", "84", "46", "87.7", "2", "19", "240", "140", "223", "HEY7234229.1 PQQ-binding-like beta-propeller repeat protein [Gemmatimonadaceae bacterium]", "diamond", "252", "43.1", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", null, "Gemmatimonadaceae bacterium"], [29438315, "PRJNA1126661_P_NODE_17650_length_326_cov_4.383399_g17121_i0", "PRJNA1126661", "17650", "326", "4.383399", "14.28988074", "Longimicrobiaceae bacterium", "3047548", "Bacteria", "Bacteria", "85.1", "8.18e-17", "", "NR", "MFL5381238.1", "3047548", "g17121", "i0", "41.3", "2.25460122699387", "121", "43", "85.6", "2", "326", "48", "69", "189", "MFL5381238.1 reverse transcriptase family protein [Longimicrobiaceae bacterium]", "diamond", "735", "85.1", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Longimicrobiia", "Longimicrobiales", "Longimicrobiaceae", null, "Longimicrobiaceae bacterium"], [29659298, "PRJNA1126661_P_NODE_24390_length_326_cov_3.292490_g23861_i0", "PRJNA1126661", "24390", "326", "3.29249", "10.7335174", "Gemmatimonadota bacterium", "2026742", "Bacteria", "Bacteria", "63.5", "1.58e-10", "", "NR", "MBK8246349.1", "2026742", "g23861", "i0", "79.4", "0.312883435582822", "34", "7", "31.3", "0", "133", "32", "62", "95", "MBK8246349.1 hypothetical protein [Gemmatimonadota bacterium]", "diamond", "102", "63.5", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadota bacterium"], [30765435, "PRJNA1126661_P_NODE_70534_length_252_cov_0.871508_g70004_i0", "PRJNA1126661", "70534", "252", "0.871508", "2.19620016", "Gemmatimonadota bacterium", "2026742", "Bacteria", "Bacteria", "43.9", "0.0159", "", "NR", "HUP01797.1", "2026742", "g70004", "i0", "61.5", "1.11904761904762", "39", "12", "42.9", "1", "144", "251", "6", "44", "HUP01797.1 electron transfer flavoprotein-ubiquinone oxidoreductase [Gemmatimonadota bacterium]", "diamond", "282", "43.9", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadota bacterium"], [30849265, "PRJNA1126661_P_NODE_11854_length_326_cov_6.221344_g11325_i0", "PRJNA1126661", "11854", "326", "6.221344", "20.28158144", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "94.7", "2.35e-20", "", "NR", "MDQ3081507.1", "2026742", "g11325", "i0", "77.6", "1.35276073619632", "49", "11", "45.1", "0", "326", "180", "202", "250", "MDQ3081507.1 ribonuclease J [Gemmatimonadota bacterium]", "diamond", "441", "94.7", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadota bacterium"], [31112765, "PRJNA1126661_P_NODE_46275_length_299_cov_3.446903_g45746_i0", "PRJNA1126661", "46275", "299", "3.446903", "10.30623997", "Gemmatimonadales bacterium", "2448054", "Bacteria", "Bacteria", "73.6", "8.29e-14", "", "NR", "HWP36559.1", "2448054", "g45746", "i0", "72.9", "0.963210702341137", "48", "13", "48.2", "0", "299", "156", "123", "170", "HWP36559.1 GNAT family protein [Gemmatimonadales bacterium]", "diamond", "288", "73.6", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "Gemmatimonadales bacterium"]], "truncated": false, "filtered_table_rows_count": 17, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA1126661", "p1": "FCB group", "p2": "Gemmatimonadota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1126661&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "PRJNA1126661", "label": "PRJNA1126661", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1126661&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "diamond", "label": "diamond", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1126661&tax_clade=FCB+group&tax_phylum=Gemmatimonadota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1126661&tax_clade=FCB+group&tax_phylum=Gemmatimonadota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1126661&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1126661&tax_clade=FCB+group&tax_phylum=Gemmatimonadota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1126661&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "FCB group", "label": "FCB group", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1126661&tax_phylum=Gemmatimonadota", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1126661&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1126661&tax_clade=FCB+group&tax_phylum=Gemmatimonadota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1126661&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "Gemmatimonadota", "label": "Gemmatimonadota", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1126661&tax_clade=FCB+group", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 460.29351599281654}