{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA1112809\" and tax_clade = \"core chlorophytes\"", "rows": [[1023223, "PRJNA1112809_P_NODE_158501_length_256_cov_0.841530_g155226_i0", "PRJNA1112809", "158501", "256", "0.84153", "2.1543168", "Haematococcus", "44744", "Plants", "Plants", "468", "1.95e-127", "", "NTclustered", "gi|1341122420|gb|MG022682.1|", "44745", "g155226", "i0", "99.609", "100.01953125", "256", "1", "100", "0", "1", "256", "766", "511", "Haematococcus lacustris isolate CCAP 34/1F small subunit ribosomal RNA gene, partial sequence", "blastn", "25605", "468", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Haematococcaceae", "Haematococcus", "Haematococcus lacustris"], [1494956, "PRJNA1112809_P_NODE_195962_length_236_cov_2.558282_g192687_i0", "PRJNA1112809", "195962", "236", "2.558282", "6.03754552", "Chlamydomonas peterfii", "28462", "Plants", "Plants", "403", "5.07e-108", "", "NTclustered", "gi|952953330|gb|KT624938.1|", "28462", "g192687", "i0", "97.458", "153.46186440678", "236", "6", "100", "0", "1", "236", "1811", "2046", "Chlamydomonas peterfii clone contig00007 chloroplast, partial genome", "blastn", "36217", "403", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas peterfii"], [2298588, "PRJNA1112809_P_NODE_129322_length_285_cov_1.726415_g126047_i0", "PRJNA1112809", "129322", "285", "1.726415", "4.92028275", "Trebouxia", "13786", "Plants", "Plants", "527", "3.59e-145", "", "NTclustered", "gi|49781197|gb|AY648107.1|", "283661", "g126047", "i0", "100", "99.8175438596491", "285", "0", "100", "0", "1", "285", "324", "40", "Trebouxia sp. Wei 22-c 26S ribosomal RNA gene, partial sequence", "blastn", "28448", "527", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Trebouxiales", "Trebouxiaceae", "Trebouxia", "Trebouxia sp. Wei 22-c"], [14248420, "PRJNA1112809_P_NODE_150432_length_263_cov_1.542105_g147157_i0", "PRJNA1112809", "150432", "263", "1.542105", "4.05573615", "Haematococcus lacustris", "44745", "Plants", "Plants", "403", "5.75e-108", "", "NTclustered", "gi|2201040776|gb|MN709220.1|", "44745", "g147157", "i0", "94.074", "146.368821292776", "270", "9", "100", "3", "1", "263", "638869", "638600", "Haematococcus lacustris strain FACHB-712 chloroplast, complete genome", "blastn", "38495", "403", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Haematococcaceae", "Haematococcus", "Haematococcus lacustris"], [16796389, "PRJNA1112809_P_NODE_137554_length_276_cov_1.517241_g134279_i0", "PRJNA1112809", "137554", "276", "1.517241", "4.18758516", "Chloroidium ellipsoideum", "63676", "Plants", "Plants", "298", "2.95e-76", "", "NTclustered", "gi|1169296931|gb|KY364701.1|", "63676", "g134279", "i0", "86.545", "14.9855072463768", "275", "32", "99", "5", "1", "273", "5419", "5690", "Chloroidium ellipsoideum 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence", "blastn", "4136", "298", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Watanabeales", "Watanabeaceae", "Chloroidium", "Chloroidium ellipsoideum"], [16798708, "PRJNA1112809_P_NODE_85174_length_367_cov_1.479592_g81899_i0", "PRJNA1112809", "85174", "367", "1.479592", "5.43010264", "Chloroidium sp. KL-2023a", "3031248", "Plants", "Plants", "628", "1.2699999999999998e-175", "", "NTclustered", "gi|2450595352|gb|ON986219.1|", "3031248", "g81899", "i0", "97.548", "108.891008174387", "367", "9", "100", "0", "1", "367", "220550", "220916", "Chloroidium sp. KL-2023a clone 2023 chloroplast, complete genome", "blastn", "39963", "628", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Watanabeales", "Watanabeaceae", "Chloroidium", "Chloroidium sp. KL-2023a"], [18070644, "PRJNA1112809_P_NODE_125075_length_290_cov_1.465438_g121800_i0", "PRJNA1112809", "125075", "290", "1.465438", "4.2497702", "Chloroidium sp. KL-2023a", "3031248", "Plants", "Plants", "503", "6.17e-138", "", "NTclustered", "gi|2450595352|gb|ON986219.1|", "3031248", "g121800", "i0", "97.931", "106.744827586207", "290", "6", "100", "0", "1", "290", "2051", "1762", "Chloroidium sp. KL-2023a clone 2023 chloroplast, complete genome", "blastn", "30956", "503", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Watanabeales", "Watanabeaceae", "Chloroidium", "Chloroidium sp. KL-2023a"], [18874894, "PRJNA1112809_P_NODE_142315_length_271_cov_1.555556_g139040_i0", "PRJNA1112809", "142315", "271", "1.555556", "4.21555676", "Viridiplantae", "33090", "Plants", "Plants", "339", "1.7e-88", "", "NTclustered", "gi|2082253475|ref|XM_001695212.2|", "3055", "g139040", "i0", "89.85", "98.5719557195572", "266", "23", "97", "3", "8", "271", "1413", "1150", "Chlamydomonas reinhardtii uncharacterized protein (CHLRE_09g386750v5), mRNA", "blastn", "26713", "340", "0.997058823529412", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [23173423, "PRJNA1112809_P_NODE_62779_length_455_cov_2.408377_g59506_i0", "PRJNA1112809", "62779", "455", "2.408377", "10.95811535", "Chlamydomonas chlamydogama", "225041", "Plants", "Plants", "673", "0", "", "NTclustered", "gi|66864258|gb|DQ015713.1|", "225041", "g59506", "i0", "95.082", "94.1054945054945", "427", "21", "94", "0", "23", "449", "1855", "1429", "Chlamydomonas chlamydogama strain UTEX 102 26S ribosomal RNA gene, partial sequence", "blastn", "42818", "673", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas chlamydogama"], [24447531, "PRJNA1112809_P_NODE_76100_length_396_cov_2.167183_g72825_i0", "PRJNA1112809", "76100", "396", "2.167183", "8.58204468", "Haematococcus lacustris", "44745", "Plants", "Plants", "534", "3.089999999999999e-147", "", "NTclustered", "gi|2201040776|gb|MN709220.1|", "44745", "g72825", "i0", "90.998", "121.068181818182", "411", "15", "100", "10", "1", "396", "8351", "7948", "Haematococcus lacustris strain FACHB-712 chloroplast, complete genome", "blastn", "47943", "534", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Haematococcaceae", "Haematococcus", "Haematococcus lacustris"], [27406965, "PRJNA1112809_P_NODE_92023_length_349_cov_1.478261_g88748_i0", "PRJNA1112809", "92023", "349", "1.478261", "5.15913089", "root", "1", "Root_unresolved", "Root_unresolved", "43.9", "0.0495", "", "NR", "KAL4853608.1", "3077", "g88748", "i0", "58.3", "1.2378223495702", "36", "14", "30.1", "1", "341", "237", "928", "963", "KAL4853608.1 Replication factor C subunit 1 [Chlorella vulgaris]", "diamond", "432", "43.9", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Chlorella", "Chlorella vulgaris"], [30280634, "PRJNA1112809_P_NODE_159592_length_254_cov_3.502762_g156317_i0", "PRJNA1112809", "159592", "254", "3.502762", "8.89701548", "root", "1", "Root_unresolved", "Root_unresolved", "53.1", "9.45e-6", "", "NR", "KAG2492987.1", "47281", "g156317", "i0", "39.5", "1.68897637795276", "76", "45", "88.6", "1", "30", "254", "1073", "1148", "KAG2492987.1 hypothetical protein HYH03_008886 [Edaphochlamys debaryana]", "diamond", "429", "53.1", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", null, "Edaphochlamys", "Edaphochlamys debaryana"], [31892327, "PRJNA1112809_P_NODE_170637_length_249_cov_0.875000_g167362_i0", "PRJNA1112809", "170637", "249", "0.875", "2.17875", "Eukaryota", "2759", "Plants", "Plants", "124", "8.119999999999999e-31", "", "NR", "KAL4858421.1", "3077", "g167362", "i0", "70.7", "21.7228915662651", "82", "24", "98.8", "0", "247", "2", "110", "191", "KAL4858421.1 40S ribosomal protein S4 [Chlorella vulgaris]", "diamond", "5409", "125", "0.992", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Chlorella", "Chlorella vulgaris"], [32398707, "PRJNA1112809_P_NODE_125359_length_290_cov_1.064516_g122084_i0", "PRJNA1112809", "125359", "290", "1.064516", "3.0870964", "root", "1", "Root_unresolved", "Root_unresolved", "175", "1.38e-49", "", "NR", "KAI8467676.1", "39955", "g122084", "i0", "91.7", "170.772413793103", "96", "8", "99.3", "0", "290", "3", "301", "396", "KAI8467676.1 MAG: ATP synthase subunit beta, mitochondrial [Monoraphidium minutum]", "diamond", "49524", "176", "0.994318181818182", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Sphaeropleales", "Selenastraceae", "Monoraphidium", "Monoraphidium minutum"]], "truncated": false, "filtered_table_rows_count": 14, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA1112809", "p1": "core chlorophytes"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1112809&tax_clade=core+chlorophytes", "results": [{"value": "PRJNA1112809", "label": "PRJNA1112809", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=core+chlorophytes", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1112809&tax_clade=core+chlorophytes", "results": [{"value": "blastn", "label": "blastn", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1112809&tax_clade=core+chlorophytes&analysis=blastn", "selected": false}, {"value": "diamond", "label": "diamond", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1112809&tax_clade=core+chlorophytes&analysis=diamond", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1112809&tax_clade=core+chlorophytes", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1112809&tax_clade=core+chlorophytes&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1112809&tax_clade=core+chlorophytes", "results": [{"value": "core chlorophytes", "label": "core chlorophytes", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1112809", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1112809&tax_clade=core+chlorophytes", "results": [{"value": "Viridiplantae", "label": "Viridiplantae", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1112809&tax_clade=core+chlorophytes&tax_kingdom=Viridiplantae", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1112809&tax_clade=core+chlorophytes", "results": [{"value": "Chlorophyta", "label": "Chlorophyta", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1112809&tax_clade=core+chlorophytes&tax_phylum=Chlorophyta", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 318.5146240030008}