{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA1112809\", tax_clade = \"Methanomada group\" and tax_phylum = \"Methanobacteriota\"", "rows": [[3574179, "PRJNA1112809_P_NODE_88663_length_357_cov_3.820423_g85388_i0", "PRJNA1112809", "88663", "357", "3.820423", "13.63891011", "Methanobacterium", "2160", "Archaea", "Archaea", "566", "9.759999999999997e-157", "", "NTclustered", "gi|584298061|gb|KF882000.1|", "483896", "g85388", "i0", "95.238", "145.725490196078", "357", "17", "100", "0", "1", "357", "2099", "2455", "Methanobacterium kanagiense strain 169 23S ribosomal RNA gene, partial sequence", "blastn", "52024", "566", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium kanagiense"], [4047148, "PRJNA1112809_P_NODE_195404_length_237_cov_5.128049_g192129_i0", "PRJNA1112809", "195404", "237", "5.128049", "12.15347613", "Methanobacterium kanagiense", "483896", "Archaea", "Archaea", "361", "3.1099999999999996e-95", "", "NTclustered", "gi|584298061|gb|KF882000.1|", "483896", "g192129", "i0", "94.093", "132.46835443038", "237", "14", "100", "0", "1", "237", "1786", "1550", "Methanobacterium kanagiense strain 169 23S ribosomal RNA gene, partial sequence", "blastn", "31395", "361", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium kanagiense"], [5323631, "PRJNA1112809_P_NODE_41725_length_624_cov_4.513612_g38511_i0", "PRJNA1112809", "41725", "624", "4.513612", "28.16493888", "Methanobacterium aridiramus", "2584467", "Archaea", "Archaea", "459", "3.12e-124", "", "NTclustered", "gi|2523005876|gb|CP040735.1|", "2584467", "g38511", "i0", "96.403", "68.3509615384615", "278", "10", "84", "0", "347", "624", "1376296", "1376019", "Methanobacterium aridiramus strain CWC-01 chromosome, complete genome", "blastn", "42651", "459", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium aridiramus"], [12502201, "PRJNA1112809_P_NODE_17870_length_1331_cov_3.517488_g15494_i0", "PRJNA1112809", "17870", "1331", "3.517488", "46.81776528", "Methanobacterium", "2160", "Archaea", "Archaea", "1936", "0", "", "NTclustered", "gi|584298061|gb|KF882000.1|", "483896", "g15494", "i0", "93.798", "152.585274229902", "1290", "76", "97", "4", "18", "1306", "1488", "202", "Methanobacterium kanagiense strain 169 23S ribosomal RNA gene, partial sequence", "blastn", "203091", "1940", "0.997938144329897", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium kanagiense"], [12973473, "PRJNA1112809_P_NODE_156651_length_257_cov_1.929348_g153376_i0", "PRJNA1112809", "156651", "257", "1.929348", "4.95842436", "Methanobacterium sp. PtaU1.Bin", "2164", "Archaea", "Archaea", "168", "3.84e-46", "", "NR", "OPY20153.1", "1811675", "g153376", "i0", "98.8", "0.992217898832685", "85", "1", "99.2", "0", "255", "1", "494", "578", "OPY20153.1 MAG: cobaltochelatase subunit CobN [Methanobacterium sp. PtaU1.Bin097]", "diamond", "255", "168", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium sp. PtaU1.Bin097"], [16796578, "PRJNA1112809_P_NODE_148494_length_265_cov_1.359375_g145219_i0", "PRJNA1112809", "148494", "265", "1.359375", "3.60234375", "Methanobacterium sp. MZ-A1", "1911685", "Archaea", "Archaea", "368", "2.12e-97", "", "NTclustered", "gi|1297871367|gb|CP017767.1|", "1911685", "g145219", "i0", "92.015", "1.99622641509434", "263", "19", "99", "2", "4", "265", "2293687", "2293426", "Methanobacterium sp. MZ-A1 chromosome, complete genome", "blastn", "529", "368", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium sp. MZ-A1"], [21897041, "PRJNA1112809_P_NODE_191918_length_241_cov_1.761905_g188643_i0", "PRJNA1112809", "191918", "241", "1.761905", "4.24619105", "Methanobacterium", "2160", "Archaea", "Archaea", "139", "1e-36", "", "NR", "HEX7467179.1", "2164", "g188643", "i0", "93.8", "2.9253112033195", "80", "5", "99.6", "0", "241", "2", "12", "91", "HEX7467179.1 MFS transporter [Methanobacterium sp.]", "diamond", "705", "140", "0.992857142857143", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium sp."], [27596293, "PRJNA1112809_P_NODE_67964_length_429_cov_2.342697_g64690_i0", "PRJNA1112809", "67964", "429", "2.342697", "10.05017013", "root", "1", "Root_unresolved", "Root_unresolved", "60.5", "1.92e-7", "", "NR", "MEN6553436.1", "2164", "g64690", "i0", "58.1", "0.594405594405594", "43", "18", "30.1", "0", "417", "289", "907", "949", "MEN6553436.1 AAA family ATPase [Methanobacterium sp.]", "diamond", "255", "60.5", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium sp."], [29341685, "PRJNA1112809_P_NODE_196789_length_234_cov_2.496894_g193514_i0", "PRJNA1112809", "196789", "234", "2.496894", "5.84273196", "Methanobacteriaceae archaeon", "2099680", "Archaea", "Archaea", "161", "3.789999999999999e-48", "", "NR", "NYB26408.1", "2099680", "g193514", "i0", "100", "0.987179487179487", "77", "0", "98.7", "0", "3", "233", "87", "163", "NYB26408.1 metallophosphoesterase family protein [Methanobacteriaceae archaeon]", "diamond", "231", "161", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", null, "Methanobacteriaceae archaeon"], [31458540, "PRJNA1112809_P_NODE_181156_length_245_cov_0.895349_g177881_i0", "PRJNA1112809", "181156", "245", "0.895349", "2.19360505", "Methanobacteriaceae archaeon", "2099680", "Archaea", "Archaea", "157", "3.72e-43", "", "NR", "NYB27069.1", "2099680", "g177881", "i0", "97.5", "0.991836734693878", "81", "2", "99.2", "0", "1", "243", "480", "560", "NYB27069.1 DUF128 domain-containing protein [Methanobacteriaceae archaeon]", "diamond", "243", "157", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", null, "Methanobacteriaceae archaeon"], [31521786, "PRJNA1112809_P_NODE_182116_length_245_cov_0.895349_g178841_i0", "PRJNA1112809", "182116", "245", "0.895349", "2.19360505", "Methanobrevibacter sp.", "66852", "Archaea", "Archaea", "118", "1.1000000000000002e-28", "", "NR", "MBO7691940.1", "66852", "g178841", "i0", "66.7", "1.98367346938776", "81", "27", "99.2", "0", "3", "245", "384", "464", "MBO7691940.1 DNA polymerase III subunit alpha [Methanobrevibacter sp.]", "diamond", "486", "118", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter sp."], [32565934, "PRJNA1112809_P_NODE_181139_length_245_cov_0.895349_g177864_i0", "PRJNA1112809", "181139", "245", "0.895349", "2.19360505", "Methanobacteriaceae archaeon", "2099680", "Archaea", "Archaea", "162", "4.74e-49", "", "NR", "NYB25710.1", "2099680", "g177864", "i0", "98.8", "0.991836734693878", "81", "1", "99.2", "0", "3", "245", "22", "102", "NYB25710.1 TetR/AcrR family transcriptional regulator [Methanobacteriaceae archaeon]", "diamond", "243", "162", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", null, "Methanobacteriaceae archaeon"]], "truncated": false, "filtered_table_rows_count": 12, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA1112809", "p1": "Methanomada group", "p2": "Methanobacteriota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1112809&tax_clade=Methanomada+group&tax_phylum=Methanobacteriota", "results": [{"value": "PRJNA1112809", "label": "PRJNA1112809", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=Methanomada+group&tax_phylum=Methanobacteriota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1112809&tax_clade=Methanomada+group&tax_phylum=Methanobacteriota", "results": [{"value": "diamond", "label": "diamond", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1112809&tax_clade=Methanomada+group&tax_phylum=Methanobacteriota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 5, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1112809&tax_clade=Methanomada+group&tax_phylum=Methanobacteriota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1112809&tax_clade=Methanomada+group&tax_phylum=Methanobacteriota", "results": [{"value": "Archaea", "label": "Archaea", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1112809&tax_clade=Methanomada+group&tax_phylum=Methanobacteriota&tax_superkingdom=Archaea", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1112809&tax_clade=Methanomada+group&tax_phylum=Methanobacteriota", "results": [{"value": "Methanomada group", "label": "Methanomada group", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1112809&tax_phylum=Methanobacteriota", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1112809&tax_clade=Methanomada+group&tax_phylum=Methanobacteriota", "results": [{"value": "Methanobacteriati", "label": "Methanobacteriati", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1112809&tax_clade=Methanomada+group&tax_phylum=Methanobacteriota&tax_kingdom=Methanobacteriati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1112809&tax_clade=Methanomada+group&tax_phylum=Methanobacteriota", "results": [{"value": "Methanobacteriota", "label": "Methanobacteriota", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1112809&tax_clade=Methanomada+group", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 512.939419997565}