{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA1108487\" and tax_phylum = \"Verrucomicrobiota\"", "rows": [[213405, "PRJNA1108487_P_NODE_2401_length_437_cov_1.505495_g2335_i0", "PRJNA1108487", "2401", "437", "1.505495", "6.57901315", "Verrucomicrobiaceae", "203557", "Bacteria", "Bacteria", "174", "6.62e-50", "", "NR", "WP_146854420.1", "748831", "g2335", "i0", "59.6", "11.2379862700229", "136", "55", "93.4", "0", "418", "11", "17", "152", "WP_146854420.1 nucleoside monophosphate kinase [Brevifollis gellanilyticus]", "diamond", "4911", "174", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", "Brevifollis", "Brevifollis gellanilyticus"], [1488088, "PRJNA1108487_P_NODE_222_length_1237_cov_3.182131_g184_i0", "PRJNA1108487", "222", "1237", "3.182131", "39.36296047", "Verrucomicrobiaceae bacterium", "2026800", "Bacteria", "Bacteria", "418", "5.19e-142", "", "NR", "RYD65414.1", "2026800", "g184", "i0", "67.9", "0.76394502829426", "315", "93", "75.2", "3", "1027", "98", "25", "336", "RYD65414.1 MAG: hypothetical protein EOP84_31955 [Verrucomicrobiaceae bacterium]", "diamond", "945", "418", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", null, "Verrucomicrobiaceae bacterium"], [18065097, "PRJNA1108487_P_NODE_2675_length_415_cov_1.596491_g2609_i0", "PRJNA1108487", "2675", "415", "1.596491", "6.62543765", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "144", "1.22e-40", "", "NR", "MBS0615710.1", "2026799", "g2609", "i0", "69.5", "6.96144578313253", "105", "29", "75.9", "1", "317", "3", "11", "112", "MBS0615710.1 superoxide dismutase [Verrucomicrobiota bacterium]", "diamond", "2889", "144", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"], [26846469, "PRJNA1108487_P_NODE_1261_length_591_cov_1.204633_g1196_i0", "PRJNA1108487", "1261", "591", "1.204633", "7.1193810300000004", "Verrucomicrobiaceae bacterium", "2026800", "Bacteria", "Bacteria", "274", "5.839999999999999e-89", "", "NR", "RYD65414.1", "2026800", "g1196", "i0", "73.7", "0.908629441624365", "179", "45", "90.9", "1", "590", "54", "160", "336", "RYD65414.1 MAG: hypothetical protein EOP84_31955 [Verrucomicrobiaceae bacterium]", "diamond", "537", "274", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", null, "Verrucomicrobiaceae bacterium"], [27099268, "PRJNA1108487_P_NODE_11262_length_242_cov_0.923077_g11196_i0", "PRJNA1108487", "11262", "242", "0.923077", "2.23384634", "Verrucomicrobiaceae bacterium", "2026800", "Bacteria", "Bacteria", "84.7", "5.93e-17", "", "NR", "RYD77031.1", "2026800", "g11196", "i0", "50.7", "0.90495867768595", "73", "36", "90.5", "0", "242", "24", "165", "237", "RYD77031.1 MAG: hypothetical protein EOP84_16100, partial [Verrucomicrobiaceae bacterium]", "diamond", "219", "84.7", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", null, "Verrucomicrobiaceae bacterium"], [27825960, "PRJNA1108487_P_NODE_8444_length_253_cov_0.866667_g8378_i0", "PRJNA1108487", "8444", "253", "0.866667", "2.19266751", "Chthoniobacterales bacterium", "2201154", "Bacteria", "Bacteria", "57", "3.99e-7", "", "NR", "MBX9743397.1", "2201154", "g8378", "i0", "45.9", "1.00790513833992", "85", "40", "93.7", "3", "15", "251", "770", "854", "MBX9743397.1 hypothetical protein [Chthoniobacterales bacterium]", "diamond", "255", "57", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Spartobacteria", "Chthoniobacterales", null, null, "Chthoniobacterales bacterium"], [28867753, "PRJNA1108487_P_NODE_11228_length_242_cov_0.923077_g11162_i0", "PRJNA1108487", "11228", "242", "0.923077", "2.23384634", "Verrucomicrobiaceae bacterium", "2026800", "Bacteria", "Bacteria", "72.4", "1.03e-12", "", "NR", "RYD71398.1", "2026800", "g11162", "i0", "49.2", "0.805785123966942", "65", "33", "80.6", "0", "3", "197", "137", "201", "RYD71398.1 MAG: hypothetical protein EOP84_24945, partial [Verrucomicrobiaceae bacterium]", "diamond", "195", "72.4", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", null, "Verrucomicrobiaceae bacterium"], [29278086, "PRJNA1108487_P_NODE_9769_length_247_cov_2.517241_g9703_i0", "PRJNA1108487", "9769", "247", "2.517241", "6.21758527", "Verrucomicrobiota bacterium", "2026799", "Bacteria", "Bacteria", "47", "0.00122", "", "NR", "MBS0646964.1", "2026799", "g9703", "i0", "31.3", "0.813765182186235", "67", "46", "81.4", "0", "5", "205", "108", "174", "MBS0646964.1 hypothetical protein [Verrucomicrobiota bacterium]", "diamond", "201", "47", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"], [29656731, "PRJNA1108487_P_NODE_10070_length_246_cov_1.190751_g10004_i0", "PRJNA1108487", "10070", "246", "1.190751", "2.92924746", "Verrucomicrobiaceae bacterium", "2026800", "Bacteria", "Bacteria", "139", "5.15e-38", "", "NR", "RYD81270.1", "2026800", "g10004", "i0", "77.5", "0.975609756097561", "80", "18", "97.6", "0", "241", "2", "169", "248", "RYD81270.1 MAG: hypothetical protein EOP84_11265, partial [Verrucomicrobiaceae bacterium]", "diamond", "240", "139", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", null, "Verrucomicrobiaceae bacterium"], [29783370, "PRJNA1108487_P_NODE_2011_length_480_cov_1.181818_g1945_i0", "PRJNA1108487", "2011", "480", "1.181818", "5.6727264", "Chthoniobacterales bacterium", "2201154", "Bacteria", "Bacteria", "52.4", "9.37e-5", "", "NR", "HEX3818319.1", "2201154", "g1945", "i0", "37.6", "0.63125", "101", "53", "61.3", "5", "3", "296", "129", "222", "HEX3818319.1 CAP domain-containing protein [Chthoniobacterales bacterium]", "diamond", "303", "52.4", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Spartobacteria", "Chthoniobacterales", null, null, "Chthoniobacterales bacterium"], [29783376, "PRJNA1108487_P_NODE_5311_length_308_cov_1.017021_g5245_i0", "PRJNA1108487", "5311", "308", "1.017021", "3.13242468", "Verrucomicrobiaceae bacterium", "2026800", "Bacteria", "Bacteria", "162", "1.35e-46", "", "NR", "RYD81270.1", "2026800", "g5245", "i0", "71.6", "0.993506493506494", "102", "29", "99.4", "0", "3", "308", "26", "127", "RYD81270.1 MAG: hypothetical protein EOP84_11265, partial [Verrucomicrobiaceae bacterium]", "diamond", "306", "162", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", null, "Verrucomicrobiaceae bacterium"], [30216871, "PRJNA1108487_P_NODE_7572_length_264_cov_1.225131_g7506_i0", "PRJNA1108487", "7572", "264", "1.225131", "3.23434584", "Bacteria", "2", "Bacteria", "Bacteria", "52.4", "2.07e-5", "", "NR", "MBL9135107.1", "2026801", "g7506", "i0", "38.2", "1.79545454545455", "89", "53", "98.9", "1", "264", "4", "1582", "1670", "MBL9135107.1 tandem-95 repeat protein [Verrucomicrobiales bacterium]", "diamond", "474", "52.4", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", null, null, "Verrucomicrobiales bacterium"], [30469952, "PRJNA1108487_P_NODE_1593_length_529_cov_2.550439_g1527_i0", "PRJNA1108487", "1593", "529", "2.550439", "13.49182231", "Verrucomicrobiota", "74201", "Bacteria", "Bacteria", "47", "0.00134", "", "NR", "HEY9153814.1", "2006848", "g1527", "i0", "47.4", "0.941398865784499", "57", "26", "30.1", "1", "288", "130", "13", "69", "HEY9153814.1 hypothetical protein [Opitutaceae bacterium]", "diamond", "498", "47.4", "0.991561181434599", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Opitutia", "Opitutales", "Opitutaceae", null, "Opitutaceae bacterium"], [30636253, "PRJNA1108487_P_NODE_3653_length_359_cov_1.727273_g3587_i0", "PRJNA1108487", "3653", "359", "1.727273", "6.20091007", "Verrucomicrobiaceae bacterium", "2026800", "Bacteria", "Bacteria", "118", "4.3e-29", "", "NR", "RYD71398.1", "2026800", "g3587", "i0", "51.7", "1.00278551532033", "120", "47", "96.1", "4", "2", "346", "169", "282", "RYD71398.1 MAG: hypothetical protein EOP84_24945, partial [Verrucomicrobiaceae bacterium]", "diamond", "360", "118", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", null, "Verrucomicrobiaceae bacterium"], [30636258, "PRJNA1108487_P_NODE_613_length_823_cov_1.993333_g555_i0", "PRJNA1108487", "613", "823", "1.993333", "16.40513059", "Verrucomicrobiota bacterium", "2026799", "Bacteria", "Bacteria", "201", "1.02e-58", "", "NR", "MBS0605284.1", "2026799", "g555", "i0", "50", "0.765492102065614", "210", "97", "75.1", "3", "819", "202", "113", "318", "MBS0605284.1 hypothetical protein [Verrucomicrobiota bacterium]", "diamond", "630", "201", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"], [31426533, "PRJNA1108487_P_NODE_4376_length_333_cov_1.800000_g4310_i0", "PRJNA1108487", "4376", "333", "1.8", "5.994", "Verrucomicrobiota bacterium", "2026799", "Bacteria", "Bacteria", "48.5", "0.00101", "", "NR", "MCX6889954.1", "2026799", "g4310", "i0", "43.9", "0.513513513513513", "57", "29", "48.6", "1", "232", "71", "132", "188", "MCX6889954.1 Ig-like domain repeat protein [Verrucomicrobiota bacterium]", "diamond", "171", "48.5", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"], [31869302, "PRJNA1108487_P_NODE_2017_length_479_cov_1.660099_g1951_i0", "PRJNA1108487", "2017", "479", "1.660099", "7.95187421", "Verrucomicrobiaceae bacterium", "2026800", "Bacteria", "Bacteria", "113", "1.02e-26", "", "NR", "RYD71398.1", "2026800", "g1951", "i0", "52.3", "0.695198329853862", "111", "51", "68.9", "2", "479", "150", "252", "361", "RYD71398.1 MAG: hypothetical protein EOP84_24945, partial [Verrucomicrobiaceae bacterium]", "diamond", "333", "113", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", null, "Verrucomicrobiaceae bacterium"], [32208738, "PRJNA1108487_P_NODE_7298_length_268_cov_1.600000_g7232_i0", "PRJNA1108487", "7298", "268", "1.6", "4.288", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "109", "1.21e-25", "", "NR", "MBL4576092.1", "2006848", "g7232", "i0", "64.9", "6.26865671641791", "77", "27", "86.2", "0", "231", "1", "395", "471", "MBL4576092.1 glycine--tRNA ligase [Opitutaceae bacterium]", "diamond", "1680", "110", "0.990909090909091", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Opitutia", "Opitutales", "Opitutaceae", null, "Opitutaceae bacterium"], [32745818, "PRJNA1108487_P_NODE_9920_length_247_cov_0.896552_g9854_i0", "PRJNA1108487", "9920", "247", "0.896552", "2.21448344", "Bacteria", "2", "Bacteria", "Bacteria", "43.5", "0.021", "", "NR", "MEI6819236.1", "2026799", "g9854", "i0", "30.5", "1.79757085020243", "82", "53", "96", "2", "10", "246", "384", "464", "MEI6819236.1 hypothetical protein [Verrucomicrobiota bacterium]", "diamond", "444", "43.9", "0.990888382687927", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"]], "truncated": false, "filtered_table_rows_count": 19, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_phylum\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA1108487", "p1": "Verrucomicrobiota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1108487&tax_phylum=Verrucomicrobiota", "results": [{"value": "PRJNA1108487", "label": "PRJNA1108487", "count": 19, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_phylum=Verrucomicrobiota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1108487&tax_phylum=Verrucomicrobiota", "results": [{"value": "diamond", "label": "diamond", "count": 19, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1108487&tax_phylum=Verrucomicrobiota&analysis=diamond", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1108487&tax_phylum=Verrucomicrobiota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 19, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1108487&tax_phylum=Verrucomicrobiota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1108487&tax_phylum=Verrucomicrobiota", "results": [{"value": "PVC group", "label": "PVC group", "count": 19, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1108487&tax_phylum=Verrucomicrobiota&tax_clade=PVC+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1108487&tax_phylum=Verrucomicrobiota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 19, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1108487&tax_phylum=Verrucomicrobiota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1108487&tax_phylum=Verrucomicrobiota", "results": [{"value": "Verrucomicrobiota", "label": "Verrucomicrobiota", "count": 19, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1108487", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 324.98077000127523}