{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA1095825\", tax_kingdom = \"Pseudomonadati\" and tax_phylum = \"Bdellovibrionota\"", "rows": [[5302388, "PRJNA1095825_P_NODE_103645_length_374_cov_1.534884_g100582_i0", "PRJNA1095825", "103645", "374", "1.534884", "5.74046616", "Bdellovibrio sp. qaytius", "1916293", "Bacteria", "Bacteria", "353", "8.71e-93", "", "NTclustered", "gi|1552089877|gb|CP025734.1|", "1916293", "g100582", "i0", "86.728", "170.743315508021", "324", "35", "87", "5", "51", "374", "666873", "666558", "Bdellovibrio sp. qaytius chromosome, complete genome", "blastn", "63858", "353", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", "Pseudobdellovibrionaceae", "Bdellovibrio", "Bdellovibrio sp. qaytius"], [7853791, "PRJNA1095825_P_NODE_285287_length_243_cov_0.905882_g282224_i0", "PRJNA1095825", "285287", "243", "0.905882", "2.20129326", 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null, null, null, "Bdellovibrionota bacterium"], [27067527, "PRJNA1095825_P_NODE_238182_length_251_cov_0.865169_g235119_i0", "PRJNA1095825", "238182", "251", "0.865169", "2.17157419", "Oligoflexus sp.", "1971216", "Bacteria", "Bacteria", "100", "1.1499999999999999e-23", "", "NR", "WP_324955171.1", "1971216", "g235119", "i0", "57.3", "1.94820717131474", "82", "35", "98", "0", "1", "246", "75", "156", "WP_324955171.1 serine aminopeptidase domain-containing protein [Oligoflexus sp.]", "diamond", "489", "100", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Oligoflexia", "Oligoflexales", "Oligoflexaceae", "Oligoflexus", "Oligoflexus sp."], [27532906, "PRJNA1095825_P_NODE_246283_length_249_cov_1.750000_g243220_i0", "PRJNA1095825", "246283", "249", "1.75", "4.3575", "Bacteria", "2", "Bacteria", "Bacteria", "133", "9.84e-36", "", "NR", "OFZ52870.1", "1797397", "g243220", "i0", "72.3", "6", "83", "23", "100", "0", "249", "1", "227", "309", "OFZ52870.1 MAG: 8-amino-7-oxononanoate synthase, partial [Bdellovibrionales bacterium RIFOXYC1_FULL_54_43]", "diamond", "1494", "134", "0.992537313432836", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", null, null, "Bdellovibrionales bacterium RIFOXYC1_FULL_54_43"], [27564255, "PRJNA1095825_P_NODE_292024_length_242_cov_0.863905_g288961_i0", "PRJNA1095825", "292024", "242", "0.863905", "2.0906501", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "104", "8.999999999999998e-25", "", "NR", "OFZ55096.1", "1797397", "g288961", "i0", "76.6", "12.7685950413223", "64", "15", "79.3", "0", "241", "50", "57", "120", "OFZ55096.1 MAG: ornithine carbamoyltransferase [Bdellovibrionales bacterium RIFOXYC1_FULL_54_43]", "diamond", "3090", "105", "0.990476190476191", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", null, null, "Bdellovibrionales bacterium RIFOXYC1_FULL_54_43"], [27604896, "PRJNA1095825_P_NODE_273744_length_245_cov_0.895349_g270681_i0", "PRJNA1095825", "273744", "245", "0.895349", "2.19360505", "Oligoflexus sp.", "1971216", "Bacteria", "Bacteria", "143", "2.55e-39", "", "NR", "WP_324958268.1", "1971216", "g270681", "i0", "78.8", "1.95918367346939", "80", "17", "98", "0", "2", "241", "243", "322", "WP_324958268.1 A/G-specific adenine glycosylase [Oligoflexus sp.]", "diamond", "480", "143", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Oligoflexia", "Oligoflexales", "Oligoflexaceae", "Oligoflexus", "Oligoflexus sp."], [28772856, "PRJNA1095825_P_NODE_185507_length_287_cov_1.327103_g182444_i0", "PRJNA1095825", "185507", "287", "1.327103", "3.80878561", "Bacteriovoracaceae bacterium", "2081706", "Bacteria", "Bacteria", "62.8", "3.48e-9", "", "NR", "MCK5072915.1", "2081706", "g182444", "i0", "45.2", "1.90243902439024", "62", "34", "64.8", "0", "188", "3", "4", "65", "MCK5072915.1 TIGR02147 family protein [Bacteriovoracaceae bacterium]", "diamond", "546", "62.8", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bacteriovoracia", "Bacteriovoracales", "Bacteriovoracaceae", null, "Bacteriovoracaceae bacterium"], [28962659, "PRJNA1095825_P_NODE_280768_length_243_cov_1.811765_g277705_i0", "PRJNA1095825", "280768", "243", "1.811765", "4.40258895", "Bdellovibrionota bacterium", "3034175", "Bacteria", "Bacteria", "148", "1.47e-40", "", "NR", "HEY8278342.1", "3034175", "g277705", "i0", "88.9", "1", "81", "9", "100", "0", "243", "1", "61", "141", "HEY8278342.1 aspartate aminotransferase family protein [Bdellovibrionota bacterium]", "diamond", "243", "148", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", null, null, null, null, "Bdellovibrionota bacterium"], [28962660, "PRJNA1095825_P_NODE_284368_length_243_cov_0.905882_g281305_i0", "PRJNA1095825", "284368", "243", "0.905882", "2.20129326", "Bdellovibrionota bacterium", "3034175", "Bacteria", "Bacteria", "50.8", "3.94e-5", "", "NR", "HEY8279457.1", "3034175", "g281305", "i0", "56.4", "0.481481481481481", "39", "16", "46.9", "1", "2", "115", "205", "243", "HEY8279457.1 hypothetical protein [Bdellovibrionota bacterium]", "diamond", "117", "50.8", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", null, null, null, null, "Bdellovibrionota bacterium"], [29088798, "PRJNA1095825_P_NODE_299808_length_228_cov_2.503226_g296745_i0", "PRJNA1095825", "299808", "228", "2.503226", "5.70735528", "Bdellovibrio sp. 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BCCA"], [29120517, "PRJNA1095825_P_NODE_271829_length_245_cov_0.895349_g268766_i0", "PRJNA1095825", "271829", "245", "0.895349", "2.19360505", "Bdellovibrionota bacterium", "3034175", "Bacteria", "Bacteria", "77.8", "2.17e-15", "", "NR", "HEY8278976.1", "3034175", "g268766", "i0", "64.9", "1.39591836734694", "57", "19", "68.6", "1", "168", "1", "1", "57", "HEY8278976.1 cyclase family protein [Bdellovibrionota bacterium]", "diamond", "342", "77.8", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", null, null, null, null, "Bdellovibrionota bacterium"], [29277987, "PRJNA1095825_P_NODE_254009_length_248_cov_0.880000_g250946_i0", "PRJNA1095825", "254009", "248", "0.88", "2.1824", "Pseudobdellovibrionaceae bacterium", "2026715", "Bacteria", "Bacteria", "77.8", "1.79e-14", "", "NR", "MBX3041499.1", "2026715", "g250946", "i0", "48.8", "6.32661290322581", "80", "41", "96.8", "0", "246", "7", "334", "413", "MBX3041499.1 cytochrome P450 [Pseudobdellovibrionaceae bacterium]", "diamond", "1569", "77.8", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", "Pseudobdellovibrionaceae", null, "Pseudobdellovibrionaceae bacterium"], [30099057, "PRJNA1095825_P_NODE_236712_length_251_cov_0.865169_g233649_i0", "PRJNA1095825", "236712", "251", "0.865169", "2.17157419", "Bdellovibrionota bacterium", "3034175", "Bacteria", "Bacteria", "63.5", "1.84e-9", "", "NR", "HEY8279698.1", "3034175", "g233649", "i0", "41.4", "1.0398406374502", "87", "45", "98", "3", "248", "3", "60", "145", "HEY8279698.1 hypothetical protein [Bdellovibrionota bacterium]", "diamond", "261", "63.5", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", null, null, null, null, "Bdellovibrionota bacterium"], [30825872, "PRJNA1095825_P_NODE_288354_length_242_cov_0.911243_g285291_i0", "PRJNA1095825", "288354", "242", "0.911243", "2.20520806", "Bdellovibrionales bacterium", "2053517", "Bacteria", "Bacteria", "99.8", "4.78e-24", "", "NR", "MCB0366077.1", "2053517", "g285291", "i0", "48.8", "0.991735537190083", "80", "41", "99.2", "0", "240", "1", "94", "173", "MCB0366077.1 hypothetical protein [Bdellovibrionales bacterium]", "diamond", "240", "99.8", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", null, null, "Bdellovibrionales bacterium"], [31141496, "PRJNA1095825_P_NODE_234795_length_251_cov_2.230337_g231732_i0", "PRJNA1095825", "234795", "251", "2.230337", "5.59814587", "Bdellovibrionota bacterium", "3034175", "Bacteria", "Bacteria", "130", "7.67e-33", "", "NR", "MEK6774059.1", "3034175", "g231732", "i0", "73.8", "0.956175298804781", "80", "21", "95.6", "0", "11", "250", "695", "774", "MEK6774059.1 outer membrane protein assembly factor BamA [Bdellovibrionota bacterium]", "diamond", "240", "130", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", null, null, null, null, "Bdellovibrionota bacterium"], [31204622, "PRJNA1095825_P_NODE_237055_length_251_cov_0.865169_g233992_i0", "PRJNA1095825", "237055", "251", "0.865169", "2.17157419", "Bdellovibrionales bacterium RIFOXYB1_FULL_39_21", "1797406", "Bacteria", "Bacteria", "99.4", "4.6e-23", "", "NR", "OFZ39096.1", "1797406", "g233992", "i0", "56.6", "0.99203187250996006", "83", "35", "98", "1", "251", "6", "203", "285", "OFZ39096.1 MAG: hypothetical protein A2385_07950 [Bdellovibrionales bacterium RIFOXYB1_FULL_39_21]", "diamond", "249", "99.4", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", null, null, "Bdellovibrionales bacterium RIFOXYB1_FULL_39_21"], [31322839, "PRJNA1095825_P_NODE_258055_length_247_cov_1.534483_g254992_i0", "PRJNA1095825", "258055", "247", "1.534483", "3.79017301", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "74.3", "2.69e-13", "", "NR", "MBL7556514.1", "2026715", "g254992", "i0", "47.9", "1.79757085020243", "73", "35", "85", "1", "245", "36", "376", "448", "MBL7556514.1 IS5 family transposase [Pseudobdellovibrionaceae bacterium]", "diamond", "444", "74.7", "0.994645247657296", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", "Pseudobdellovibrionaceae", null, "Pseudobdellovibrionaceae bacterium"], [31394971, "PRJNA1095825_P_NODE_211856_length_268_cov_1.405128_g208793_i0", "PRJNA1095825", "211856", "268", "1.405128", "3.76574304", "Bdellovibrio sp.", "28201", "Bacteria", "Bacteria", "113", "2.4799999999999998e-28", "", "NR", "MBI2712231.1", "28201", "g208793", "i0", "62.8", "1.69029850746269", "78", "29", "87.3", "0", "33", "266", "143", "220", "MBI2712231.1 hypothetical protein [Bdellovibrio sp.]", "diamond", "453", "113", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", "Pseudobdellovibrionaceae", "Bdellovibrio", "Bdellovibrio sp."], [31417785, "PRJNA1095825_P_NODE_247796_length_249_cov_0.875000_g244733_i0", "PRJNA1095825", "247796", "249", "0.875", "2.17875", "Peredibacter", "263370", "Bacteria", "Bacteria", "149", "8.939999999999999e-40", "", "NR", "WP_321390425.1", "28202", "g244733", "i0", "92.7", "2.96385542168675", "82", "6", "98.8", "0", "3", "248", "335", "416", "WP_321390425.1 OPT family oligopeptide transporter [Peredibacter starrii]", "diamond", "738", "149", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bacteriovoracia", "Bacteriovoracales", "Bacteriovoracaceae", "Peredibacter", "Peredibacter starrii"], [32027547, "PRJNA1095825_P_NODE_292518_length_241_cov_1.797619_g289455_i0", "PRJNA1095825", "292518", "241", "1.797619", "4.33226179", "Bdellovibrionales bacterium", "2053517", "Bacteria", "Bacteria", "150", "4.1e-40", "", "NR", "MCC7403152.1", "2053517", "g289455", "i0", "98.8", "0.995850622406639", "80", "1", "99.6", "0", "2", "241", "21", "100", "MCC7403152.1 acyltransferase [Bdellovibrionales bacterium]", "diamond", "240", "150", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", null, null, "Bdellovibrionales bacterium"], [32185785, "PRJNA1095825_P_NODE_256758_length_248_cov_0.880000_g253695_i0", "PRJNA1095825", "256758", "248", "0.88", "2.1824", "Bdellovibrionales bacterium", "2053517", "Bacteria", "Bacteria", "115", "1.34e-29", "", "NR", "MEQ1665765.1", "2053517", "g253695", "i0", "67.1", "0.991935483870968", "82", "27", "99.2", "0", "248", "3", "104", "185", "MEQ1665765.1 lysophospholipase [Bdellovibrionales bacterium]", "diamond", "246", "115", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", null, null, "Bdellovibrionales bacterium"], [32407244, "PRJNA1095825_P_NODE_219939_length_262_cov_1.629630_g216876_i0", "PRJNA1095825", "219939", "262", "1.62963", "4.2696306", "Bdellovibrionales bacterium", "2053517", "Bacteria", "Bacteria", "156", "5.3499999999999997e-42", "", "NR", "MBY0314560.1", "2053517", "g216876", "i0", "87.4", "3.98473282442748", "87", "11", "99.6", "0", "262", "2", "702", "788", "MBY0314560.1 TraC family protein [Bdellovibrionales bacterium]", "diamond", "1044", "156", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", null, null, "Bdellovibrionales bacterium"], [32722866, "PRJNA1095825_P_NODE_208700_length_270_cov_1.563452_g205637_i0", "PRJNA1095825", "208700", "270", "1.563452", "4.2213204", "Oligoflexales bacterium", "2687297", "Bacteria", "Bacteria", "42.7", "0.0485", "", "NR", "MFK7823623.1", "2687297", "g205637", "i0", "41.9", "0.344444444444444", "31", "18", "34.4", "0", "111", "203", "222", "252", "MFK7823623.1 ABC transporter substrate-binding protein [Oligoflexales bacterium]", "diamond", "93", "42.7", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Oligoflexia", "Oligoflexales", null, null, "Oligoflexales bacterium"]], "truncated": false, "filtered_table_rows_count": 24, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_kingdom\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA1095825", "p1": "Pseudomonadati", "p2": "Bdellovibrionota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1095825&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota", "results": [{"value": "PRJNA1095825", "label": "PRJNA1095825", "count": 24, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1095825&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota", "results": [{"value": "diamond", "label": "diamond", "count": 23, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1095825&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1095825&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1095825&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 24, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1095825&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1095825&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1095825&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 24, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1095825&tax_phylum=Bdellovibrionota", "selected": true}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1095825&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota", "results": [{"value": "Bdellovibrionota", "label": "Bdellovibrionota", "count": 24, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1095825&tax_kingdom=Pseudomonadati", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 343.31836699857377}