{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA1087264\", tax_clade = \"PVC group\" and tax_phylum = \"Verrucomicrobiota\"", "rows": [[194151, "PRJNA1087264_P_NODE_9081_length_209_cov_1.218750_g8999_i0", "PRJNA1087264", "9081", "209", "1.21875", "2.5471875", "Bacteria", "2", "Bacteria", "Bacteria", "75.5", "6.79e-14", "", "NR", "MEY4483817.1", "2026799", "g8999", "i0", "55.9", "8.75598086124402", "68", "23", "97.6", "1", "206", "3", "352", "412", "MEY4483817.1 glutamate synthase large subunit [Verrucomicrobiota bacterium]", "diamond", "1830", "75.5", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"], [20595136, "PRJNA1087264_P_NODE_297_length_1139_cov_3.261468_g254_i0", "PRJNA1087264", "297", "1139", "3.261468", "37.14812052", "Verrucomicrobiia bacterium", "2499141", "Bacteria", "Bacteria", "359", "8.899999999999997e-113", "", "NR", "MCX7871735.1", "2499141", "g254", "i0", "50.5", "6.80860403863038", "376", "176", "99", "2", "1137", "10", "475", "840", "MCX7871735.1 magnesium-translocating P-type ATPase [Verrucomicrobiia bacterium]", "diamond", "7755", "359", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", null, null, null, "Verrucomicrobiia bacterium"], [27058952, "PRJNA1087264_P_NODE_5862_length_264_cov_0.948837_g5780_i0", "PRJNA1087264", "5862", "264", "0.948837", "2.50492968", "root", "1", "Root_unresolved", "Root_unresolved", "42.7", "0.0356", "", "NR", "MCB1125209.1", "2499141", "g5780", "i0", "31.6", "1.52272727272727", "76", "48", "83", "2", "37", "255", "59", "133", "MCB1125209.1 acyltransferase [Verrucomicrobiia bacterium]", "diamond", "402", "43.1", "0.990719257540603", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", null, null, null, "Verrucomicrobiia bacterium"], [27573049, "PRJNA1087264_P_NODE_8264_length_219_cov_1.764706_g8182_i0", "PRJNA1087264", "8264", "219", "1.764706", "3.86470614", "Verrucomicrobiaceae bacterium", "2026800", "Bacteria", "Bacteria", "66.2", "1.23e-10", "", "NR", "RYD71398.1", "2026800", "g8182", "i0", "49.3", "1", "73", "36", "98.6", "1", "2", "217", "272", "344", "RYD71398.1 MAG: hypothetical protein EOP84_24945, partial [Verrucomicrobiaceae bacterium]", "diamond", "219", "66.2", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", null, "Verrucomicrobiaceae bacterium"], [29878098, "PRJNA1087264_P_NODE_7551_length_229_cov_1.533333_g7469_i0", "PRJNA1087264", "7551", "229", "1.533333", "3.51133257", "Verrucomicrobiaceae bacterium", "2026800", "Bacteria", "Bacteria", "127", "2.04e-33", "", "NR", "RYD65414.1", "2026800", "g7469", "i0", "84", "0.982532751091703", "75", "12", "98.3", "0", "1", "225", "87", "161", "RYD65414.1 MAG: hypothetical protein EOP84_31955 [Verrucomicrobiaceae bacterium]", "diamond", "225", "127", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", null, "Verrucomicrobiaceae bacterium"], [31078731, "PRJNA1087264_P_NODE_8495_length_216_cov_2.107784_g8413_i0", "PRJNA1087264", "8495", "216", "2.107784", "4.55281344", "Verrucomicrobiota bacterium", "2026799", "Bacteria", "Bacteria", "42.7", "0.0276", "", "NR", "SPE54920.1", "2026799", "g8413", "i0", "43.6", "0.763888888888889", "55", "29", "76.4", "1", "180", "16", "461", "513", "SPE54920.1 hypothetical protein SBV1_1980011 [Verrucomicrobiota bacterium]", "diamond", "165", "42.7", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"], [31109985, "PRJNA1087264_P_NODE_5835_length_264_cov_2.200000_g5753_i0", "PRJNA1087264", "5835", "264", "2.2", "5.808", "Verrucomicrobiaceae bacterium", "2026800", "Bacteria", "Bacteria", "101", "1.01e-25", "", "NR", "RYD73501.1", "2026800", "g5753", "i0", "77.4", "1.43181818181818", "62", "14", "70.5", "0", "203", "18", "3", "64", "RYD73501.1 MAG: fructose-bisphosphate aldolase class I [Verrucomicrobiaceae bacterium]", "diamond", "378", "101", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", null, "Verrucomicrobiaceae bacterium"], [31268255, "PRJNA1087264_P_NODE_20395_length_162_cov_0.902655_g20313_i0", "PRJNA1087264", "20395", "162", "0.902655", "1.4623011", "Pelagicoccus albus", "415222", "Bacteria", "Bacteria", "78.2", "2.1e-15", "", "NR", "WP_185658533.1", "415222", "g20313", "i0", "68.5", "2.98148148148148", "54", "17", "100", "0", "1", "162", "105", "158", "WP_185658533.1 cysteine synthase A [Pelagicoccus albus]", "diamond", "483", "78.2", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Opitutia", "Puniceicoccales", "Pelagicoccaceae", "Pelagicoccus", "Pelagicoccus albus"], [31331401, "PRJNA1087264_P_NODE_5476_length_273_cov_1.580357_g5394_i0", "PRJNA1087264", "5476", "273", "1.580357", "4.31437461", "Verrucomicrobiales bacterium", "2026801", "Bacteria", "Bacteria", "47.4", "0.00124", "", "NR", "MDF1753436.1", "2026801", "g5394", "i0", "34.5", "0.923076923076923", "84", "45", "87.9", "3", "31", "270", "322", "399", "MDF1753436.1 hypothetical protein [Verrucomicrobiales bacterium]", "diamond", "252", "47.4", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", null, null, "Verrucomicrobiales bacterium"], [31331403, "PRJNA1087264_P_NODE_6956_length_240_cov_1.068063_g6874_i0", "PRJNA1087264", "6956", "240", "1.068063", "2.5633512", "Verrucomicrobiota bacterium", "2026799", "Bacteria", "Bacteria", "53.9", "4.01e-6", "", "NR", "MEO0797117.1", "2026799", "g6874", "i0", "36.5", "0.7875", "63", "40", "78.8", "0", "51", "239", "7", "69", "MEO0797117.1 serine/threonine-protein kinase [Verrucomicrobiota bacterium]", "diamond", "189", "53.9", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"], [31900828, "PRJNA1087264_P_NODE_7857_length_225_cov_0.869318_g7775_i0", "PRJNA1087264", "7857", "225", "0.869318", "1.9559655", "Verrucomicrobiota bacterium", "2026799", "Bacteria", "Bacteria", "48.5", "2.6e-4", "", "NR", "MEY4445816.1", "2026799", "g7775", "i0", "46.7", "0.8", "60", "26", "77.3", "2", "44", "217", "92", "147", "MEY4445816.1 hypothetical protein [Verrucomicrobiota bacterium]", "diamond", "180", "48.5", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"]], "truncated": false, "filtered_table_rows_count": 11, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA1087264", "p1": "PVC group", "p2": "Verrucomicrobiota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1087264&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "PRJNA1087264", "label": "PRJNA1087264", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1087264&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "diamond", "label": "diamond", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1087264&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota&analysis=diamond", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1087264&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1087264&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1087264&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "PVC group", "label": "PVC group", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1087264&tax_phylum=Verrucomicrobiota", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1087264&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1087264&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1087264&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "Verrucomicrobiota", "label": "Verrucomicrobiota", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1087264&tax_clade=PVC+group", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 197.3412810039008}