{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA1086823\" and tax_kingdom = \"Methanobacteriati\"", "rows": [[1468538, "PRJNA1086823_P_NODE_6882_length_312_cov_2.610879_g6765_i0", "PRJNA1086823", "6882", "312", "2.610879", "8.14594248", "Methanobacterium sp. PtaU1.Bin242", "1811676", "Archaea", "Archaea", "75.1", "1.79e-13", "", "NR", "OPY30658.1", "1811676", "g6765", "i0", "72", "0.480769230769231", "50", "14", "48.1", "0", "163", "312", "174", "223", "OPY30658.1 MAG: putative sugar kinase [Methanobacterium sp. PtaU1.Bin242]", "diamond", "150", "75.1", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium sp. PtaU1.Bin242"], [13770747, "PRJNA1086823_P_NODE_19491_length_235_cov_3.228395_g19374_i0", "PRJNA1086823", "19491", "235", "3.228395", "7.58672825", "Methanobacterium", "2160", "Archaea", "Archaea", "340", "4.009999999999999e-89", "", "NTclustered", "gi|584298061|gb|KF882000.1|", "483896", "g19374", "i0", "92.797", "103.83829787234", "236", "15", "100", "2", "1", "235", "1476", "1710", "Methanobacterium kanagiense strain 169 23S ribosomal RNA gene, partial sequence", "blastn", "24402", "340", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium kanagiense"], [27375373, "PRJNA1086823_P_NODE_17443_length_245_cov_0.906977_g17326_i0", "PRJNA1086823", "17443", "245", "0.906977", "2.22209365", "Methanosarcina", "2207", "Archaea", "Archaea", "132", "4.279999999999999e-34", "", "NR", "WP_048036455.1", "2209", "g17326", "i0", "75.3", "6.94285714285714", "81", "20", "99.2", "0", "244", "2", "393", "473", "WP_048036455.1 HsdM family class I SAM-dependent methyltransferase [Methanosarcina mazei]", "diamond", "1701", "132", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Methanomicrobia", "Methanosarcinales", "Methanosarcinaceae", "Methanosarcina", "Methanosarcina mazei"], [28353789, "PRJNA1086823_P_NODE_8686_length_285_cov_3.273585_g8569_i0", "PRJNA1086823", "8686", "285", "3.273585", "9.32971725", "Stenosarchaea group", "2290931", "Archaea", "Archaea", "74.7", "3.03e-13", "", "NR", "CAD6492031.1", "2608793", "g8569", "i0", "56.4", "5.45263157894737", "55", "24", "57.9", "0", "118", "282", "281", "335", "CAD6492031.1 MAG: putative transposase [Candidatus Argoarchaeum ethanivorans]", "diamond", "1554", "74.7", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Methanomicrobia", "Methanosarcinales", null, "Candidatus Argoarchaeum", "Candidatus Argoarchaeum ethanivorans"], [29341283, "PRJNA1086823_P_NODE_4669_length_366_cov_1.064846_g4552_i0", "PRJNA1086823", "4669", "366", "1.064846", "3.89733636", "Methanobacteriota archaeon", "2026739", "Archaea", "Archaea", "82.4", "2.08e-16", "", "NR", "RMG30150.1", "2026739", "g4552", "i0", "39.7", "0.991803278688525", "121", "68", "99.2", "3", "4", "366", "97", "212", "RMG30150.1 MAG: aquaporin [Methanobacteriota archaeon]", "diamond", "363", "82.4", "1", "Archaea", null, "Methanobacteriati", "Methanobacteriota", null, null, null, null, "Methanobacteriota archaeon"], [30225430, "PRJNA1086823_P_NODE_15312_length_248_cov_0.891429_g15195_i0", "PRJNA1086823", "15312", "248", "0.891429", "2.21074392", "Methanomassiliicoccales archaeon", "1906667", "Archaea", "Archaea", "77", "1.25e-14", "", "NR", "TET89590.1", "1906667", "g15195", "i0", "44.3", "0.955645161290323", "79", "44", "95.6", "0", "8", "244", "87", "165", "TET89590.1 MAG: EVE domain-containing protein [Methanomassiliicoccales archaeon]", "diamond", "237", "77", "1", "Archaea", null, "Methanobacteriati", "Thermoplasmatota", "Thermoplasmata", "Methanomassiliicoccales", null, null, "Methanomassiliicoccales archaeon"], [30501289, "PRJNA1086823_P_NODE_6873_length_312_cov_3.205021_g6756_i0", "PRJNA1086823", "6873", "312", "3.205021", "9.99966552", "Methanobacterium", "2160", "Archaea", "Archaea", "104", "3.6300000000000006e-27", "", "NR", "OPY19862.1", "1811675", "g6756", "i0", "100", "0.942307692307692", "49", "0", "47.1", "0", "310", "164", "19", "67", "OPY19862.1 MAG: Protein ArsC [Methanobacterium sp. PtaU1.Bin097]", "diamond", "294", "104", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium sp. PtaU1.Bin097"], [32208666, "PRJNA1086823_P_NODE_6878_length_312_cov_2.849372_g6761_i0", "PRJNA1086823", "6878", "312", "2.849372", "8.89004064", "Methanobacterium", "2160", "Archaea", "Archaea", "99.4", "2.4699999999999994e-23", "", "NR", "HEY0196299.1", "2164", "g6761", "i0", "87.3", "5.28846153846154", "55", "7", "52.9", "0", "146", "310", "14", "68", "HEY0196299.1 PadR family transcriptional regulator [Methanobacterium sp.]", "diamond", "1650", "99.4", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium sp."], [32280733, "PRJNA1086823_P_NODE_4599_length_367_cov_3.166667_g4482_i0", "PRJNA1086823", "4599", "367", "3.166667", "11.62166789", "Methanocaldococcus villosus", "667126", "Archaea", "Archaea", "97.1", "8.449999999999999e-23", "", "NR", "WP_004592618.1", "667126", "g4482", "i0", "42.6", "1.88010899182561", "115", "48", "94", "2", "367", "23", "44", "140", "WP_004592618.1 30S ribosomal protein S19e [Methanocaldococcus villosus]", "diamond", "690", "97.1", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanococci", "Methanococcales", "Methanocaldococcaceae", "Methanocaldococcus", "Methanocaldococcus villosus"]], "truncated": false, "filtered_table_rows_count": 9, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_kingdom\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA1086823", "p1": "Methanobacteriati"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1086823&tax_kingdom=Methanobacteriati", "results": [{"value": "PRJNA1086823", "label": "PRJNA1086823", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_kingdom=Methanobacteriati", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1086823&tax_kingdom=Methanobacteriati", "results": [{"value": "diamond", "label": "diamond", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1086823&tax_kingdom=Methanobacteriati&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1086823&tax_kingdom=Methanobacteriati&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1086823&tax_kingdom=Methanobacteriati", "results": [{"value": "Archaea", "label": "Archaea", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1086823&tax_kingdom=Methanobacteriati&tax_superkingdom=Archaea", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1086823&tax_kingdom=Methanobacteriati", "results": [{"value": "Methanomada group", "label": "Methanomada group", "count": 5, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1086823&tax_kingdom=Methanobacteriati&tax_clade=Methanomada+group", "selected": false}, {"value": "Stenosarchaea group", "label": "Stenosarchaea group", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1086823&tax_kingdom=Methanobacteriati&tax_clade=Stenosarchaea+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1086823&tax_kingdom=Methanobacteriati", "results": [{"value": "Methanobacteriati", "label": "Methanobacteriati", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1086823", "selected": true}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1086823&tax_kingdom=Methanobacteriati", "results": [{"value": "Methanobacteriota", "label": "Methanobacteriota", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1086823&tax_kingdom=Methanobacteriati&tax_phylum=Methanobacteriota", "selected": false}, {"value": "Thermoplasmatota", "label": "Thermoplasmatota", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1086823&tax_kingdom=Methanobacteriati&tax_phylum=Thermoplasmatota", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 189.34242999966955}