{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA1073183\" and tax_clade = \"PVC group\"", "rows": [[1016073, "PRJNA1073183_P_NODE_4461_length_599_cov_1.638783_g4369_i0", "PRJNA1073183", "4461", "599", "1.638783", "9.81631017", "Pirellulaceae bacterium", "2699754", "Bacteria", "Bacteria", "229", "6.420000000000001e-73", "", "NR", "MFK7736369.1", "2699754", "g4369", "i0", "62.9", "2.70951585976628", "178", "61", "87.1", "3", "39", "560", "21", "197", "MFK7736369.1 peptidylprolyl isomerase [Pirellulaceae bacterium]", "diamond", "1623", "229", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Pirellulales", "Pirellulaceae", null, "Pirellulaceae bacterium"], [4013793, "PRJNA1073183_P_NODE_3184_length_701_cov_1.805732_g3099_i0", "PRJNA1073183", "3184", "701", "1.805732", "12.65818132", "Verrucomicrobiaceae bacterium", "2026800", "Bacteria", "Bacteria", "348", "1.29e-117", "", "NR", "RYD65414.1", "2026800", "g3099", "i0", "73.9", "1.00142653352354", "234", "58", "99.7", "2", "700", "2", "85", "316", "RYD65414.1 MAG: hypothetical protein EOP84_31955 [Verrucomicrobiaceae bacterium]", "diamond", "702", "348", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", null, "Verrucomicrobiaceae bacterium"], [10390308, "PRJNA1073183_P_NODE_10889_length_389_cov_2.066456_g10794_i0", "PRJNA1073183", "10889", "389", "2.066456", "8.03851384", "uncultured Verrucomicrobiota bacterium", "156588", "Bacteria", "Bacteria", "496", "1.43e-135", "", "NTclustered", "gi|226525339|gb|FJ872375.1|", "156588", "g10794", "i0", "91.831", "155.804627249357", "355", "29", "91", "0", "1", "355", "27824", "27470", "Uncultured Verrucomicrobia bacterium clone 286 genomic sequence", "blastn", "60608", "496", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "uncultured Verrucomicrobiota bacterium"], [11665886, "PRJNA1073183_P_NODE_24590_length_262_cov_2.005291_g24495_i0", "PRJNA1073183", "24590", "262", "2.005291", "5.25386242", "uncultured Planctomycetaceae bacterium", "100233", "Bacteria", "Bacteria", "451", "2.02e-122", "", "NTclustered", "gi|389547028|gb|JQ401956.1|", "100233", "g24495", "i0", "97.71", "98.2328244274809", "262", "6", "100", "0", "1", "262", "39", "300", "Uncultured Planctomycetaceae bacterium clone CNY_02197 16S ribosomal RNA gene, partial sequence", "blastn", "25737", "451", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Planctomycetales", "Planctomycetaceae", null, "uncultured Planctomycetaceae bacterium"], [12941003, "PRJNA1073183_P_NODE_25491_length_256_cov_3.234973_g25396_i0", "PRJNA1073183", "25491", "256", "3.234973", "8.28153088", "uncultured Planctomycetaceae bacterium", "100233", "Bacteria", "Bacteria", "215", "2.8e-51", "", "NTclustered", "gi|2874254106|emb|OY970189.1|", "100233", "g25396", "i0", "85.922", "113.05078125", "206", "23", "79", "6", "9", "211", "4317291", "4317089", "MAG: uncultured Planctomycetaceae bacterium isolate MFD09603.bin.2.127 genome assembly, chromosome: 1", "blastn", "28941", "215", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Planctomycetales", "Planctomycetaceae", null, "uncultured Planctomycetaceae bacterium"], [15489960, "PRJNA1073183_P_NODE_30873_length_245_cov_1.901163_g30778_i0", "PRJNA1073183", "30873", "245", "1.901163", "4.65784935", "uncultured Gemmataceae bacterium", "1914239", "Bacteria", "Bacteria", "353", "5.41e-93", "", "NTclustered", "gi|2874253853|emb|OY969909.1|", "1914239", "g30778", "i0", "92.653", "194.951020408163", "245", "18", "100", "0", "1", "245", "2002870", "2002626", "MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1", "blastn", "47763", "353", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Gemmatales", "Gemmataceae", null, "uncultured Gemmataceae bacterium"], [16764429, "PRJNA1073183_P_NODE_8634_length_434_cov_1.673130_g8540_i0", "PRJNA1073183", "8634", "434", "1.67313", "7.2613842", "Chlamydiales bacterium", "2047757", "Bacteria", "Bacteria", "242", "8.820000000000001e-80", "", "NR", "MCP5470421.1", "2047757", "g8540", "i0", "81.1", "0.988479262672811", "143", "27", "98.8", "0", "6", "434", "1", "143", "MCP5470421.1 hypothetical protein [Chlamydiales bacterium]", "diamond", "429", "242", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "Chlamydiales bacterium"], [17593823, "PRJNA1073183_P_NODE_19314_length_297_cov_1.736607_g19219_i0", "PRJNA1073183", "19314", "297", "1.736607", "5.15772279", "Singulisphaera", "466152", "Bacteria", "Bacteria", "387", "6.66e-103", "", "NTclustered", "gi|485099129|ref|NR_102524.1|", "466153", "g19219", "i0", "90.301", "118.043771043771", "299", "24", "99", "5", "2", "297", "299", "3", "Singulisphaera acidiphila strain MOB10 23S ribosomal RNA gene, complete sequence", "blastn", "35059", "387", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Isosphaerales", "Isosphaeraceae", "Singulisphaera", "Singulisphaera acidiphila"], [21864238, "PRJNA1073183_P_NODE_34298_length_241_cov_0.916667_g34203_i0", "PRJNA1073183", "34298", "241", "0.916667", "2.20916747", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "117", "1.9000000000000003e-28", "", "NR", "MSU23997.1", "1913982", "g34203", "i0", "79.7", "13.6680497925311", "79", "16", "98.3", "0", "3", "239", "603", "681", "MSU23997.1 DUF1592 domain-containing protein [Opitutus sp.]", "diamond", "3294", "117", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Opitutia", "Opitutales", "Opitutaceae", "Opitutus", "Opitutus sp."], [26655638, "PRJNA1073183_P_NODE_32101_length_244_cov_0.900585_g32006_i0", "PRJNA1073183", "32101", "244", "0.900585", "2.1974274", "Chlamydiales bacterium", "2047757", "Bacteria", "Bacteria", "140", "2.07e-40", "", "NR", "MCP5470420.1", "2047757", "g32006", "i0", "80.2", "0.995901639344262", "81", "16", "99.6", "0", "1", "243", "2", "82", "MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium]", "diamond", "243", "140", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "Chlamydiales bacterium"], [27446861, "PRJNA1073183_P_NODE_13103_length_358_cov_1.080702_g13008_i0", "PRJNA1073183", "13103", "358", "1.080702", "3.86891316", "Telmatocola sphagniphila", "1123043", "Bacteria", "Bacteria", "68.9", "8.84e-11", "", "NR", "WP_213498649.1", "1123043", "g13008", "i0", "28.2", "2.70670391061453", "131", "80", "98", "1", "6", "356", "468", "598", "WP_213498649.1 ATP-dependent zinc metalloprotease FtsH [Telmatocola sphagniphila]", "diamond", "969", "68.9", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Gemmatales", "Gemmataceae", "Telmatocola", "Telmatocola sphagniphila"], [28235688, "PRJNA1073183_P_NODE_17366_length_314_cov_1.099585_g17271_i0", "PRJNA1073183", "17366", "314", "1.099585", "3.4526969", "Waddliaceae bacterium", "2026802", "Bacteria", "Bacteria", "70.1", "1.65e-11", "", "NR", "HEY4831209.1", "2026802", "g17271", "i0", "45.3", "1.39490445859873", "86", "45", "80.3", "1", "1", "252", "267", "352", "HEY4831209.1 F0F1 ATP synthase subunit alpha [Waddliaceae bacterium]", "diamond", "438", "70.1", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Waddliaceae", null, "Waddliaceae bacterium"], [28678152, "PRJNA1073183_P_NODE_2787_length_747_cov_1.158754_g2704_i0", "PRJNA1073183", "2787", "747", "1.158754", "8.65589238", "Verrucomicrobiaceae bacterium", "2026800", "Bacteria", "Bacteria", "381", "2.7799999999999993e-126", "", "NR", "RYD77759.1", "2026800", "g2704", "i0", "78.4", "0.983935742971888", "245", "53", "98.4", "0", "737", "3", "161", "405", "RYD77759.1 MAG: hypothetical protein EOP84_15150, partial [Verrucomicrobiaceae bacterium]", "diamond", "735", "381", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", null, "Verrucomicrobiaceae bacterium"], [28795628, "PRJNA1073183_P_NODE_26847_length_251_cov_0.865169_g26752_i0", "PRJNA1073183", "26847", "251", "0.865169", "2.17157419", "Bacteria", "2", "Bacteria", "Bacteria", "76.6", "3.47e-14", "", "NR", "MFM1768708.1", "2026799", "g26752", "i0", "44.7", "3.54980079681275", "76", "40", "90.8", "2", "16", "243", "73", "146", "MFM1768708.1 hypothetical protein [Verrucomicrobiota bacterium]", "diamond", "891", "76.6", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"], [28898843, "PRJNA1073183_P_NODE_12708_length_363_cov_1.327586_g12613_i0", "PRJNA1073183", "12708", "363", "1.327586", "4.81913718", "Verrucomicrobiaceae bacterium", "2026800", "Bacteria", "Bacteria", "128", "6.84e-33", "", "NR", "RYD71398.1", "2026800", "g12613", "i0", "58.5", "0.975206611570248", "118", "46", "95", "3", "347", "3", "233", "350", "RYD71398.1 MAG: hypothetical protein EOP84_24945, partial [Verrucomicrobiaceae bacterium]", "diamond", "354", "128", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", null, "Verrucomicrobiaceae bacterium"], [29246303, "PRJNA1073183_P_NODE_24209_length_265_cov_1.203125_g24114_i0", "PRJNA1073183", "24209", "265", "1.203125", "3.18828125", "Opitutaceae bacterium", "2006848", "Bacteria", "Bacteria", "43.1", "0.0352", "", "NR", "HXC01461.1", "2006848", "g24114", "i0", "33.7", "0.973584905660377", "86", "44", "82.6", "3", "22", "240", "371", "456", "HXC01461.1 methyltransferase domain-containing protein [Opitutaceae bacterium]", "diamond", "258", "43.1", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Opitutia", "Opitutales", "Opitutaceae", null, "Opitutaceae bacterium"], [30004298, "PRJNA1073183_P_NODE_10131_length_403_cov_1.830303_g10037_i0", "PRJNA1073183", "10131", "403", "1.830303", "7.37612109", "Lentisphaerota bacterium", "1932692", "Bacteria", "Bacteria", "47", "0.00695", "", "NR", "NQU40615.1", "1932692", "g10037", "i0", "50", "0.588089330024814", "46", "21", "34.2", "1", "1", "138", "378", "421", "NQU40615.1 glycosyltransferase [Lentisphaerota bacterium]", "diamond", "237", "47", "1", "Bacteria", "PVC group", "Pseudomonadati", "Lentisphaerota", null, null, null, null, "Lentisphaerota bacterium"], [31047157, "PRJNA1073183_P_NODE_29015_length_248_cov_0.880000_g28920_i0", "PRJNA1073183", "29015", "248", "0.88", "2.1824", "Sedimentisphaerales bacterium", "2813034", "Bacteria", "Bacteria", "81.6", "2.07e-16", "", "NR", "MBN1974499.1", "2813034", "g28920", "i0", "64.2", "0.641129032258065", "53", "19", "64.1", "0", "162", "4", "8", "60", "MBN1974499.1 hypothetical protein [Sedimentisphaerales bacterium]", "diamond", "159", "81.6", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Phycisphaerae", "Sedimentisphaerales", null, null, "Sedimentisphaerales bacterium"], [31164456, "PRJNA1073183_P_NODE_28795_length_248_cov_0.880000_g28700_i0", "PRJNA1073183", "28795", "248", "0.88", "2.1824", "Bacteria", "2", "Bacteria", "Bacteria", "147", "4.73e-39", "", "NR", "MFN4244329.1", "2795155", "g28700", "i0", "82.9", "9.91935483870968", "82", "14", "99.2", "0", "246", "1", "1076", "1157", "MFN4244329.1 methionine synthase [Tepidisphaerales bacterium]", "diamond", "2460", "147", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Phycisphaerae", "Tepidisphaerales", null, null, "Tepidisphaerales bacterium"], [32249085, "PRJNA1073183_P_NODE_26358_length_251_cov_1.297753_g26263_i0", "PRJNA1073183", "26358", "251", "1.297753", "3.25736003", "Parachlamydiaceae bacterium", "2052176", "Bacteria", "Bacteria", "102", "8.989999999999998e-24", "", "NR", "MBA3815054.1", "2052176", "g26263", "i0", "57.8", "5.00796812749004", "83", "34", "98", "1", "250", "5", "230", "312", "MBA3815054.1 RsmB/NOP family class I SAM-dependent RNA methyltransferase [Parachlamydiaceae bacterium]", "diamond", "1257", "102", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", null, "Parachlamydiaceae bacterium"], [32470455, "PRJNA1073183_P_NODE_28439_length_249_cov_0.875000_g28344_i0", "PRJNA1073183", "28439", "249", "0.875", "2.17875", "Planctomycetota bacterium", "2026780", "Bacteria", "Bacteria", "43.9", "0.00629", "", "NR", "MBL8754923.1", "2026780", "g28344", "i0", "42.9", "0.927710843373494", "77", "32", "83.1", "4", "214", "8", "14", "86", "MBL8754923.1 hypothetical protein [Planctomycetota bacterium]", "diamond", "231", "43.9", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", null, null, null, null, "Planctomycetota bacterium"]], "truncated": false, "filtered_table_rows_count": 21, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA1073183", "p1": "PVC group"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1073183&tax_clade=PVC+group", "results": [{"value": "PRJNA1073183", "label": "PRJNA1073183", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=PVC+group", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1073183&tax_clade=PVC+group", "results": [{"value": "diamond", "label": "diamond", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1073183&tax_clade=PVC+group&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 5, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1073183&tax_clade=PVC+group&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1073183&tax_clade=PVC+group", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1073183&tax_clade=PVC+group&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1073183&tax_clade=PVC+group", "results": [{"value": "PVC group", "label": "PVC group", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1073183", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1073183&tax_clade=PVC+group", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1073183&tax_clade=PVC+group&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1073183&tax_clade=PVC+group", "results": [{"value": "Planctomycetota", "label": "Planctomycetota", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1073183&tax_clade=PVC+group&tax_phylum=Planctomycetota", "selected": false}, {"value": "Verrucomicrobiota", "label": "Verrucomicrobiota", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1073183&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "selected": false}, {"value": "Chlamydiota", "label": "Chlamydiota", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1073183&tax_clade=PVC+group&tax_phylum=Chlamydiota", "selected": false}, {"value": "Lentisphaerota", "label": "Lentisphaerota", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1073183&tax_clade=PVC+group&tax_phylum=Lentisphaerota", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 337.9065740009537}