{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA1073005\", tax_clade = \"FCB group\" and tax_phylum = \"Bacteroidota\"", "rows": [[187001, "PRJNA1073005_P_NODE_9581_length_247_cov_0.885057_g9462_i0", "PRJNA1073005", "9581", "247", "0.885057", "2.18609079", "Bacteroides intestinalis", "329854", "Bacteria", "Bacteria", "291", "4.35e-74", "", "NTclustered", "gi|1707809164|gb|CP041379.1|", "329854", "g9462", "i0", "88.211", "361.246963562753", "246", "25", "99", "4", "4", "247", "444000", "444243", "Bacteroides intestinalis strain APC919/174 chromosome, complete genome", "blastn", "89228", "291", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Bacteroidia", "Bacteroidales", "Bacteroidaceae", "Bacteroides", "Bacteroides intestinalis"], [2737548, "PRJNA1073005_P_NODE_9143_length_250_cov_0.870056_g9024_i0", "PRJNA1073005", "9143", "250", "0.870056", "2.17514", "Cellulophaga sp. TSM-5", "3393396", "Bacteria", "Bacteria", "52.8", "0.023", "", "NTclustered", "gi|2900105490|dbj|AP039451.1|", "3393396", "g9024", "i0", "100", "0.112", "28", "0", "11", "0", "141", "168", "2035764", "2035791", "Cellulophaga sp. TSM-5 DNA, complete genome", "blastn", "28", "52.8", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Flavobacteriia", "Flavobacteriales", "Flavobacteriaceae", "Cellulophaga", "Cellulophaga sp. TSM-5"], [4843891, "PRJNA1073005_P_NODE_1984_length_791_cov_0.972145_g1884_i0", "PRJNA1073005", "1984", "791", "0.972145", "7.68966695", "Flavobacteriales", "200644", "Bacteria", "Bacteria", "1284", "0", "", "NTclustered", "gi|470484592|ref|NR_076656.1|", "531844", "g1884", "i0", "96.757", "433.361567635904", "771", "23", "97", "2", "1", "770", "386", "1155", "Flavobacteriaceae bacterium 3519-10 strain 3519-10 23S ribosomal RNA, complete sequence", "blastn", "342789", "1290", "0.995348837209302", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Flavobacteriia", "Flavobacteriales", "Flavobacteriaceae", null, "Flavobacteriaceae bacterium 3519-10"], [4844069, "PRJNA1073005_P_NODE_9784_length_245_cov_0.895349_g9665_i0", "PRJNA1073005", "9784", "245", "0.895349", "2.19360505", "Flavobacterium", "237", "Bacteria", "Bacteria", "442", "1.1199999999999994e-119", "", "NTclustered", "gi|2306666110|emb|OX336425.1|", "1114861", "g9665", "i0", "99.184", "566.991836734694", "245", "2", "100", "0", "1", "245", "23952", "24196", "Flavobacterium collinsii strain TRV642 genome assembly, chromosome: TRV642", "blastn", "138913", "446", "0.991031390134529", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Flavobacteriia", "Flavobacteriales", "Flavobacteriaceae", "Flavobacterium", "Flavobacterium collinsii"], [7839608, "PRJNA1073005_P_NODE_8647_length_260_cov_1.433155_g8528_i0", "PRJNA1073005", "8647", "260", "1.433155", "3.726203", "uncultured Bacteroidota bacterium", "152509", "Bacteria", "Bacteria", "292", "1.28e-74", "", "NTclustered", "gi|2874253714|emb|OY969556.1|", "152509", "g8528", "i0", "86.973", "243.026923076923", "261", "32", "99", "2", "2", "260", "170016", "169756", "MAG: uncultured Bacteroidetes bacterium isolate MFD09286.bin.c.1 genome assembly, chromosome: 1", "blastn", "63187", "292", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", null, null, null, null, "uncultured Bacteroidota bacterium"], [11665651, "PRJNA1073005_P_NODE_9470_length_247_cov_1.770115_g9351_i0", "PRJNA1073005", "9470", "247", "1.770115", "4.37218405", "Proteiniphilum saccharofermentans", "1642647", "Bacteria", "Bacteria", "357", "4.22e-94", "", "NTclustered", "gi|1135440284|emb|LT605205.1|", "1642647", "g9351", "i0", "92.713", "1", "247", "18", "100", "0", "1", "247", "2643905", "2643659", "Proteiniphilum saccharofermentans isolate M3/6 genome assembly, chromosome: I", "blastn", "247", "357", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Bacteroidia", "Bacteroidales", "Dysgonomonadaceae", "Proteiniphilum", "Proteiniphilum saccharofermentans"], [15489618, "PRJNA1073005_P_NODE_7613_length_297_cov_16.665179_g7494_i0", "PRJNA1073005", "7613", "297", "16.665179", "49.49558163", "uncultured Alkaliflexus sp.", "435293", "Bacteria", "Bacteria", "278", "4.18e-70", "", "NTclustered", "gi|1079705208|emb|LT624091.1|", "435293", "g7494", "i0", "100", "82.2222222222222", "150", "0", "97", "0", "2", "151", "460", "311", "Uncultured Alkaliflexus sp. partial 16S rRNA gene, isolate OTU_99", "blastn", "24420", "278", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Bacteroidia", "Marinilabiliales", "Marinilabiliaceae", "Alkaliflexus", "uncultured Alkaliflexus sp."], [20588046, "PRJNA1073005_P_NODE_7837_length_288_cov_1.181395_g7718_i0", "PRJNA1073005", "7837", "288", "1.181395", "3.4024176", "Bacteroides caecimuris", "1796613", "Bacteria", "Bacteria", "366", "8.38e-97", "", "NTclustered", "gi|2235377421|gb|CP096969.1|", "1796613", "g7718", "i0", "89.86", "499.236111111111", "286", "28", "99", "1", "1", "286", "3234593", "3234877", "Bacteroides caecimuris strain I48 chromosome", "blastn", "143780", "366", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Bacteroidia", "Bacteroidales", "Bacteroidaceae", "Bacteroides", "Bacteroides caecimuris"], [21863841, "PRJNA1073005_P_NODE_8058_length_281_cov_1.182692_g7939_i0", "PRJNA1073005", "8058", "281", "1.182692", "3.32336452", "Chryseolinea sp.", "2059303", "Bacteria", "Bacteria", "155", "2.81e-43", "", "NR", "HTF17304.1", "2059303", "g7939", "i0", "86.8", "1.94306049822064", "91", "12", "97.2", "0", "8", "280", "288", "378", "HTF17304.1 histidinol dehydrogenase [Chryseolinea sp.]", "diamond", "546", "155", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Cytophagia", "Cytophagales", "Fulvivirgaceae", "Chryseolinea", "Chryseolinea sp."], [22692891, "PRJNA1073005_P_NODE_5638_length_389_cov_1.746835_g5519_i0", "PRJNA1073005", "5638", "389", "1.746835", "6.79518815", "Chryseobacterium", "59732", "Bacteria", "Bacteria", "664", "0", "", "NTclustered", "gi|2429074367|gb|CP115858.1|", "192389", "g5519", "i0", "97.429", "388.136246786632", "389", "10", "100", "0", "1", "389", "2628157", "2627769", "Chryseobacterium daecheongense strain PL22-22A chromosome, complete genome", "blastn", "150985", "665", "0.998496240601504", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Flavobacteriia", "Flavobacteriales", "Weeksellaceae", "Chryseobacterium", "Chryseobacterium daecheongense"], [23968401, "PRJNA1073005_P_NODE_8319_length_272_cov_1.115578_g8200_i0", "PRJNA1073005", "8319", "272", "1.115578", "3.03437216", "Flavobacterium", "237", "Bacteria", "Bacteria", "475", "1.2499999999999999e-129", "", "NTclustered", "gi|1127353223|gb|KY419857.1|", "239", "g8200", "i0", "98.162", "100", "272", "5", "100", "0", "1", "272", "632", "361", "Flavobacterium sp. strain ICC26 16S ribosomal RNA gene, partial sequence", "blastn", "27200", "475", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Flavobacteriia", "Flavobacteriales", "Flavobacteriaceae", "Flavobacterium", "Flavobacterium sp."], [26846153, "PRJNA1073005_P_NODE_10181_length_242_cov_0.911243_g10062_i0", "PRJNA1073005", "10181", "242", "0.911243", "2.20520806", "Bacteroidales bacterium", "2030927", "Bacteria", "Bacteria", "50.4", "7.1e-5", "", "NR", "MDD2199559.1", "2030927", "g10062", "i0", "40.8", "0.942148760330578", "76", "40", "93", "3", "11", "235", "2", "73", "MDD2199559.1 AAA family ATPase [Bacteroidales bacterium]", "diamond", "228", "50.4", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Bacteroidia", "Bacteroidales", null, null, "Bacteroidales bacterium"], [26846156, "PRJNA1073005_P_NODE_8321_length_272_cov_1.090452_g8202_i0", "PRJNA1073005", "8321", "272", "1.090452", "2.96602944", "Bacteroides nordii", "291645", "Bacteria", "Bacteria", "43.9", "0.018", "", "NR", "WP_278508216.1", "291645", "g8202", "i0", "32.5", "0.849264705882353", "77", "50", "84.9", "1", "240", "10", "23", "97", "WP_278508216.1 RecB family exonuclease [Bacteroides nordii]", "diamond", "231", "43.9", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Bacteroidia", "Bacteroidales", "Bacteroidaceae", "Bacteroides", "Bacteroides nordii"], [27572911, "PRJNA1073005_P_NODE_6704_length_338_cov_0.871698_g6585_i0", "PRJNA1073005", "6704", "338", "0.871698", "2.94633924", "Bacteroidota bacterium", "1898104", "Bacteria", "Bacteria", "44.3", "0.0292", "", "NR", "MFN5181455.1", "1898104", "g6585", "i0", "35.4", "0.576923076923077", "65", "41", "56.8", "1", "130", "321", "298", "362", "MFN5181455.1 formimidoylglutamase [Bacteroidota bacterium]", "diamond", "195", "44.3", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", null, null, null, null, "Bacteroidota bacterium"], [28709738, "PRJNA1073005_P_NODE_8087_length_280_cov_1.169082_g7968_i0", "PRJNA1073005", "8087", "280", "1.169082", "3.2734296", "Bernardetiaceae bacterium", "2802581", "Bacteria", "Bacteria", "157", "2.8e-45", "", "NR", "MCU0448677.1", "2802581", "g7968", "i0", "83.7", "6.9", "92", "15", "98.6", "0", "3", "278", "64", "155", "MCU0448677.1 ABC transporter ATP-binding protein [Bernardetiaceae bacterium]", "diamond", "1932", "157", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Cytophagia", "Cytophagales", "Bernardetiaceae", null, "Bernardetiaceae bacterium"], [29088545, "PRJNA1073005_P_NODE_7028_length_322_cov_1.236948_g6909_i0", "PRJNA1073005", "7028", "322", "1.236948", "3.98297256", "Flavobacterium sp.", "239", "Bacteria", "Bacteria", "94.4", "5.76e-20", "", "NR", "WP_396190472.1", "239", "g6909", "i0", "45.3", "0.987577639751553", "106", "55", "98.8", "1", "3", "320", "91", "193", "WP_396190472.1 RNase H family protein [Flavobacterium sp.]", "diamond", "318", "94.4", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Flavobacteriia", "Flavobacteriales", "Flavobacteriaceae", "Flavobacterium", "Flavobacterium sp."], [30225321, "PRJNA1073005_P_NODE_6332_length_355_cov_0.776596_g6213_i0", "PRJNA1073005", "6332", "355", "0.776596", "2.7569158", "Flammeovirgaceae bacterium", "2026740", "Bacteria", "Bacteria", "86.3", "1.88e-19", "", "NR", "MFM7855636.1", "2026740", "g6213", "i0", "58.4", "0.650704225352113", "77", "31", "64.2", "1", "312", "85", "1", "77", "MFM7855636.1 hypothetical protein [Flammeovirgaceae bacterium]", "diamond", "231", "86.3", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Cytophagia", "Cytophagales", "Flammeovirgaceae", null, "Flammeovirgaceae bacterium"], [31521226, "PRJNA1073005_P_NODE_9856_length_245_cov_0.895349_g9737_i0", "PRJNA1073005", "9856", "245", "0.895349", "2.19360505", "Bacteroidota", "976", "Bacteria", "Bacteria", "168", "5.03e-51", "", "NR", "WP_095161135.1", "976", "g9737", "i0", "100", "0.991836734693878", "81", "0", "99.2", "0", "3", "245", "73", "153", "WP_095161135.1 MULTISPECIES: c-type cytochrome [Bacteroidota]", "diamond", "243", "168", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", null, null, null, null, null], [32848485, "PRJNA1073005_P_NODE_5260_length_411_cov_1.455621_g5141_i0", "PRJNA1073005", "5260", "411", "1.455621", "5.98260231", "Flagellimonas oceani", "2698672", "Bacteria", "Bacteria", "97.8", "6.43e-24", "", "NR", "WP_220123600.1", "2698672", "g5141", "i0", "75", "0.985401459854015", "64", "16", "46.7", "0", "5", "196", "2", "65", "WP_220123600.1 hypothetical protein, partial [Flagellimonas oceani]", "diamond", "405", "97.8", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Flavobacteriia", "Flavobacteriales", "Flavobacteriaceae", "Flagellimonas", "Flagellimonas oceani"]], "truncated": false, "filtered_table_rows_count": 19, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA1073005", "p1": "FCB group", "p2": "Bacteroidota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1073005&tax_clade=FCB+group&tax_phylum=Bacteroidota", "results": [{"value": "PRJNA1073005", "label": "PRJNA1073005", "count": 19, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=FCB+group&tax_phylum=Bacteroidota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1073005&tax_clade=FCB+group&tax_phylum=Bacteroidota", "results": [{"value": "blastn", "label": "blastn", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1073005&tax_clade=FCB+group&tax_phylum=Bacteroidota&analysis=blastn", "selected": false}, {"value": "diamond", "label": "diamond", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1073005&tax_clade=FCB+group&tax_phylum=Bacteroidota&analysis=diamond", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1073005&tax_clade=FCB+group&tax_phylum=Bacteroidota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 19, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1073005&tax_clade=FCB+group&tax_phylum=Bacteroidota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1073005&tax_clade=FCB+group&tax_phylum=Bacteroidota", "results": [{"value": "FCB group", "label": "FCB group", "count": 19, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1073005&tax_phylum=Bacteroidota", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1073005&tax_clade=FCB+group&tax_phylum=Bacteroidota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 19, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1073005&tax_clade=FCB+group&tax_phylum=Bacteroidota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1073005&tax_clade=FCB+group&tax_phylum=Bacteroidota", "results": [{"value": "Bacteroidota", "label": "Bacteroidota", "count": 19, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1073005&tax_clade=FCB+group", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 574.0100939874537}