{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA1068513\" and tax_superkingdom = \"Archaea\"", "rows": [[12935612, "PRJNA1068513_S_NODE_3151_length_490_cov_1.069544_g3106_i0", "PRJNA1068513", "3151", "490", "1.069544", "5.2407656", "Nitrosopumilus oxyclinae", "1959104", "Archaea", "Archaea", "54.7", "0.013", "", "NTclustered", "gi|1869222960|gb|CP026994.1|", "1959104", "g3106", "i0", "100", "0.0591836734693878", "29", "0", "6", "0", "265", "293", "422793", "422765", "Nitrosopumilus oxyclinae strain HCE1 chromosome, complete genome", "blastn", "29", "54.7", "1", "Archaea", null, "Thermoproteati", "Nitrososphaerota", "Nitrososphaeria", "Nitrosopumilales", "Nitrosopumilaceae", "Nitrosopumilus", "Nitrosopumilus oxyclinae"], [28141404, "PRJNA1068513_S_NODE_2005_length_568_cov_1.795960_g1963_i0", "PRJNA1068513", "2005", "568", "1.79596", "10.2010528", "archaeon", "1906665", "Archaea", "Archaea", "105", "1.82e-24", "", "NR", "MDP2436777.1", "1906665", "g1963", "i0", "39.3", "0.617957746478873", "117", "71", "61.8", "0", "534", "184", "89", "205", "MDP2436777.1 dTMP kinase [archaeon]", "diamond", "351", "105", "1", "Archaea", null, null, null, null, null, null, null, "archaeon"], [28709654, "PRJNA1068513_S_NODE_6987_length_345_cov_2.860294_g6941_i0", "PRJNA1068513", "6987", "345", "2.860294", "9.8680143", "archaeon", "1906665", "Archaea", "Archaea", "135", "1.42e-34", "", "NR", "MCQ2816260.1", "1906665", "g6941", "i0", "61.7", "1.59130434782609", "94", "36", "81.7", "0", "2", "283", "438", "531", "MCQ2816260.1 hypothetical protein [archaeon]", "diamond", "549", "135", "1", "Archaea", null, null, null, null, null, null, null, "archaeon"], [29309341, "PRJNA1068513_S_NODE_5649_length_382_cov_5.559871_g5603_i0", "PRJNA1068513", "5649", "382", "5.559871", "21.23870722", "Methanobacteriota archaeon", "2026739", "Archaea", "Archaea", "47", "0.00521", "", "NR", "MDC0212646.1", "2026739", "g5603", "i0", "32.8", "0.455497382198953", "58", "39", "45.5", "0", "56", "229", "363", "420", "MDC0212646.1 thymidine phosphorylase [Methanobacteriota archaeon]", "diamond", "174", "47", "1", "Archaea", null, "Methanobacteriati", "Methanobacteriota", null, null, null, null, "Methanobacteriota archaeon"], [31070145, "PRJNA1068513_S_NODE_4615_length_421_cov_1.804598_g4570_i0", "PRJNA1068513", "4615", "421", "1.804598", "7.59735758", "Archaea", "2157", "Archaea", "Archaea", "104", "3.44e-25", "", "NR", "MEM3335614.1", "1906666", "g4570", "i0", "45", "2.54394299287411", "120", "60", "83.4", "3", "4", "354", "53", "169", "MEM3335614.1 thermonuclease family protein [Thermoplasmata archaeon]", "diamond", "1071", "105", "0.990476190476191", "Archaea", null, "Methanobacteriati", "Thermoplasmatota", "Thermoplasmata", null, null, null, "Thermoplasmata archaeon"], [32113797, "PRJNA1068513_S_NODE_8518_length_310_cov_1.666667_g8472_i0", "PRJNA1068513", "8518", "310", "1.666667", "5.1666677", "Caldisphaera", "200414", "Archaea", "Archaea", "56.6", "1.08e-7", "", "NR", "WP_015233053.1", "200415", "g8472", "i0", "42.6", "2.23548387096774", "61", "33", "59", "1", "200", "18", "55", "113", "WP_015233053.1 ribonuclease P protein component 4 [Caldisphaera lagunensis]", "diamond", "693", "57", "0.992982456140351", "Archaea", null, "Thermoproteati", "Thermoproteota", "Thermoprotei", "Acidilobales", "Caldisphaeraceae", "Caldisphaera", "Caldisphaera lagunensis"], [32619614, "PRJNA1068513_S_NODE_13720_length_231_cov_2.822785_g13674_i0", "PRJNA1068513", "13720", "231", "2.822785", "6.52063335", "Methanothermobacter", "145260", "Archaea", "Archaea", "92", "1.31e-20", "", "NR", "WP_112094136.1", "680118", "g13674", "i0", "57.3", "3.87012987012987", "75", "32", "97.4", "0", "1", "225", "176", "250", "WP_112094136.1 fumarylacetoacetate hydrolase family protein [Methanothermobacter tenebrarum]", "diamond", "894", "92", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanothermobacter", "Methanothermobacter tenebrarum"]], "truncated": false, "filtered_table_rows_count": 7, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_superkingdom\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA1068513", "p1": "Archaea"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1068513&tax_superkingdom=Archaea", "results": [{"value": "PRJNA1068513", "label": "PRJNA1068513", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_superkingdom=Archaea", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1068513&tax_superkingdom=Archaea", "results": [{"value": "diamond", "label": "diamond", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1068513&tax_superkingdom=Archaea&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1068513&tax_superkingdom=Archaea&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1068513&tax_superkingdom=Archaea", "results": [{"value": "Archaea", "label": "Archaea", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1068513", "selected": true}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1068513&tax_superkingdom=Archaea", "results": [{"value": "Methanomada group", "label": "Methanomada group", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1068513&tax_superkingdom=Archaea&tax_clade=Methanomada+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1068513&tax_superkingdom=Archaea", "results": [{"value": "Methanobacteriati", "label": "Methanobacteriati", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1068513&tax_superkingdom=Archaea&tax_kingdom=Methanobacteriati", "selected": false}, {"value": "Thermoproteati", "label": "Thermoproteati", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1068513&tax_superkingdom=Archaea&tax_kingdom=Thermoproteati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1068513&tax_superkingdom=Archaea", "results": [{"value": "Methanobacteriota", "label": "Methanobacteriota", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1068513&tax_superkingdom=Archaea&tax_phylum=Methanobacteriota", "selected": false}, {"value": "Nitrososphaerota", "label": "Nitrososphaerota", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1068513&tax_superkingdom=Archaea&tax_phylum=Nitrososphaerota", "selected": false}, {"value": "Thermoplasmatota", "label": "Thermoplasmatota", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1068513&tax_superkingdom=Archaea&tax_phylum=Thermoplasmatota", "selected": false}, {"value": "Thermoproteota", "label": "Thermoproteota", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1068513&tax_superkingdom=Archaea&tax_phylum=Thermoproteota", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 128.91999700514134}