{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA1047749\" and tax_superkingdom = \"Archaea\"", "rows": [[5277813, "PRJNA1047749_P_NODE_26085_length_299_cov_7.469027_g25818_i0", "PRJNA1047749", "26085", "299", "7.469027", "22.33239073", "Halosimplex rarum", "3396619", "Archaea", "Archaea", "139", "2.07e-28", "", "NTclustered", "gi|2908454640|gb|CP180412.1|", "3396619", "g25818", "i0", "84.028", "2.67892976588629", "144", "23", "48", "0", "13", "156", "1820921", "1820778", "Halosimplex sp. TS25 chromosome, complete genome", "blastn", "801", "139", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Halobacteria", "Halobacteriales", "Haloarculaceae", "Halosimplex", "Halosimplex rarum"], [13763548, "PRJNA1047749_P_NODE_27031_length_297_cov_13.629464_g26764_i0", "PRJNA1047749", "27031", "297", "13.629464", "40.47950808", "root", "1", "Root_unresolved", "Root_unresolved", "81.3", "2.03e-15", "", "NR", "MCE5214309.1", "2164", "g26764", "i0", "57.1", "14.1414141414141", "70", "25", "65.7", "1", "3", "197", "596", "665", "MCE5214309.1 PAS domain S-box protein [Methanobacterium sp.]", "diamond", "4200", "82", "0.991463414634146", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium sp."], [15477764, "PRJNA1047749_P_NODE_24533_length_301_cov_3.188596_g24266_i0", "PRJNA1047749", "24533", "301", "3.188596", "9.59767396", "Thermoplasmatota archaeon", "2806419", "Archaea", "Archaea", "69.7", "2.54e-11", "", "NR", "HUR69663.1", "2806419", "g24266", "i0", "75.6", "1.92358803986711", "45", "11", "44.9", "0", "286", "152", "868", "912", "HUR69663.1 PAS domain S-box protein [Thermoplasmatota archaeon]", "diamond", "579", "69.7", "1", "Archaea", null, "Methanobacteriati", "Thermoplasmatota", null, null, null, null, "Thermoplasmatota archaeon"], [16751969, "PRJNA1047749_P_NODE_27994_length_295_cov_2.738739_g27727_i0", "PRJNA1047749", "27994", "295", "2.738739", "8.07928005", "root", "1", "Root_unresolved", "Root_unresolved", "81.3", "1.08e-15", "", "NR", "HEU4984756.1", "1971748", "g27727", "i0", "63.9", "1.24067796610169", "61", "22", "62", "0", "294", "112", "269", "329", "HEU4984756.1 SDR family oxidoreductase [Nitrososphaera sp.]", "diamond", "366", "82", "0.991463414634146", "Archaea", null, "Thermoproteati", "Nitrososphaerota", "Nitrososphaeria", "Nitrososphaerales", "Nitrososphaeraceae", "Nitrososphaera", "Nitrososphaera sp."], [20576121, "PRJNA1047749_P_NODE_27617_length_296_cov_2.901345_g27350_i0", "PRJNA1047749", "27617", "296", "2.901345", "8.5879812", "Haloglomus litoreum", "3034026", "Archaea", "Archaea", "56.5", "0.002", "", "NTclustered", "gi|2463606059|gb|CP119988.1|", "3034026", "g27350", "i0", "100", "0.101351351351351", "30", "0", "10", "0", "245", "274", "1876041", "1876012", "Haloglomus litoreum strain DT116 chromosome, complete genome", "blastn", "30", "56.5", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Halobacteria", "Halobacteriales", "Natronomonadaceae", "Haloglomus", "Haloglomus litoreum"], [23127619, "PRJNA1047749_P_NODE_45719_length_232_cov_2.622642_g45452_i0", "PRJNA1047749", "45719", "232", "2.622642", "6.08452944", "Methanobacterium aridiramus", "2584467", "Archaea", "Archaea", "424", "3.82e-114", "", "NTclustered", "gi|2523005876|gb|CP040735.1|", "2584467", "g45452", "i0", "99.569", "133.836206896552", "232", "1", "100", "0", "1", "232", "1375805", "1375574", "Methanobacterium aridiramus strain CWC-01 chromosome, complete genome", "blastn", "31050", "424", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium aridiramus"], [24400995, "PRJNA1047749_P_NODE_23560_length_301_cov_4.986842_g23293_i0", "PRJNA1047749", "23560", "301", "4.986842", "15.01039442", "Pyrobaculum aerophilum", "13773", "Archaea", "Archaea", "287", "7.050000000000001e-73", "", "NTclustered", "gi|18308975|gb|AE009441.1|", "178306", "g23293", "i0", "84.026", "4.0797342192691", "313", "34", "99", "10", "1", "297", "972783", "973095", "Pyrobaculum aerophilum str. IM2, complete genome", "blastn", "1228", "287", "1", "Archaea", null, "Thermoproteati", "Thermoproteota", "Thermoprotei", "Thermoproteales", "Thermoproteaceae", "Pyrobaculum", "Pyrobaculum aerophilum"], [24401067, "PRJNA1047749_P_NODE_27260_length_297_cov_3.531250_g26993_i0", "PRJNA1047749", "27260", "297", "3.53125", "10.4878125", "Halovalidus salilacus", "3075124", "Archaea", "Archaea", "54.7", "0.008", "", "NTclustered", "gi|2581323319|gb|CP134700.1|", "3075124", "g26993", "i0", "100", "0.191919191919192", "29", "0", "10", "0", "240", "268", "3941006", "3940978", "Halovalidus salilacus strain CCL63 chromosome, complete genome", "blastn", "57", "54.7", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Halobacteria", "Halobacteriales", "Natrialbaceae", "Halovalidus", "Halovalidus salilacus"], [27911396, "PRJNA1047749_P_NODE_50825_length_203_cov_7.061538_g50558_i0", "PRJNA1047749", "50825", "203", "7.061538", "14.33492214", "root", "1", "Root_unresolved", "Root_unresolved", "108", "2.88e-27", "", "NR", "MCD4843358.1", "2250255", "g50558", "i0", "81", "4.66995073891626", "63", "12", "93.1", "0", "189", "1", "41", "103", "MCD4843358.1 type I restriction-modification system subunit M [Methanosarcinales archaeon]", "diamond", "948", "108", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Methanomicrobia", "Methanosarcinales", null, null, "Methanosarcinales archaeon"], [28164290, "PRJNA1047749_P_NODE_19705_length_312_cov_3.029289_g19438_i0", "PRJNA1047749", "19705", "312", "3.029289", "9.45138168", "root", "1", "Root_unresolved", "Root_unresolved", "70.1", "1.44e-11", "", "NR", "MCF2136388.1", "2053491", "g19438", "i0", "62", "1.875", "50", "19", "48.1", "0", "162", "311", "242", "291", "MCF2136388.1 D-glycerate dehydrogenase [Candidatus Thorarchaeota archaeon]", "diamond", "585", "70.1", "1", "Archaea", null, "Promethearchaeati", "Candidatus Thorarchaeota", null, null, null, null, "Candidatus Thorarchaeota archaeon"], [30509219, "PRJNA1047749_P_NODE_11333_length_371_cov_6.959732_g11069_i0", "PRJNA1047749", "11333", "371", "6.959732", "25.82060572", "Thermoproteota archaeon", "2056631", "Archaea", "Archaea", "109", "3.1699999999999997e-25", "", "NR", "MEM2057655.1", "2056631", "g11069", "i0", "76.1", "0.54177897574124", "67", "15", "54.2", "1", "3", "203", "362", "427", "MEM2057655.1 hypothetical protein [Thermoproteota archaeon]", "diamond", "201", "109", "1", "Archaea", null, "Thermoproteati", "Thermoproteota", null, null, null, null, "Thermoproteota archaeon"], [30698733, "PRJNA1047749_P_NODE_47234_length_226_cov_9.235294_g46967_i0", "PRJNA1047749", "47234", "226", "9.235294", "20.87176444", "Methanoculleus taiwanensis", "1550565", "Archaea", "Archaea", "56.6", "3.86e-7", "", "NR", "WP_128694369.1", "1550565", "g46967", "i0", "71.8", "4.18141592920354", "39", "11", "51.8", "0", "2", "118", "586", "624", "WP_128694369.1 1,4-alpha-glucan branching protein GlgB [Methanoculleus taiwanensis]", "diamond", "945", "56.6", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Methanomicrobia", "Methanomicrobiales", "Methanomicrobiaceae", "Methanoculleus", "Methanoculleus taiwanensis"], [30888406, "PRJNA1047749_P_NODE_11794_length_363_cov_8.241379_g11530_i0", "PRJNA1047749", "11794", "363", "8.241379", "29.91620577", "Nanobdellota archaeon", "2026764", "Archaea", "Archaea", "52.8", "3.55e-5", "", "NR", "MBU0958263.1", "2026764", "g11530", "i0", "39.1", "0.570247933884298", "69", "42", "57", "0", "157", "363", "206", "274", "MBU0958263.1 endonuclease domain-containing protein [Nanoarchaeota archaeon]", "diamond", "207", "52.8", "1", "Archaea", null, "Nanobdellati", "Nanobdellota", null, null, null, null, "Nanobdellota archaeon"]], "truncated": false, "filtered_table_rows_count": 13, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_superkingdom\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA1047749", "p1": "Archaea"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1047749&tax_superkingdom=Archaea", "results": [{"value": "PRJNA1047749", "label": "PRJNA1047749", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_superkingdom=Archaea", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1047749&tax_superkingdom=Archaea", "results": [{"value": "diamond", "label": "diamond", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1047749&tax_superkingdom=Archaea&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 5, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1047749&tax_superkingdom=Archaea&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1047749&tax_superkingdom=Archaea", "results": [{"value": "Archaea", "label": "Archaea", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1047749", "selected": true}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1047749&tax_superkingdom=Archaea", "results": [{"value": "Stenosarchaea group", "label": "Stenosarchaea group", "count": 5, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1047749&tax_superkingdom=Archaea&tax_clade=Stenosarchaea+group", "selected": false}, {"value": "Methanomada group", "label": "Methanomada group", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1047749&tax_superkingdom=Archaea&tax_clade=Methanomada+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1047749&tax_superkingdom=Archaea", "results": [{"value": "Methanobacteriati", "label": "Methanobacteriati", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1047749&tax_superkingdom=Archaea&tax_kingdom=Methanobacteriati", "selected": false}, {"value": "Thermoproteati", "label": "Thermoproteati", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1047749&tax_superkingdom=Archaea&tax_kingdom=Thermoproteati", "selected": false}, {"value": "Nanobdellati", "label": "Nanobdellati", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1047749&tax_superkingdom=Archaea&tax_kingdom=Nanobdellati", "selected": false}, {"value": "Promethearchaeati", "label": "Promethearchaeati", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1047749&tax_superkingdom=Archaea&tax_kingdom=Promethearchaeati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1047749&tax_superkingdom=Archaea", "results": [{"value": "Methanobacteriota", "label": "Methanobacteriota", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1047749&tax_superkingdom=Archaea&tax_phylum=Methanobacteriota", "selected": false}, {"value": "Thermoproteota", "label": "Thermoproteota", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1047749&tax_superkingdom=Archaea&tax_phylum=Thermoproteota", "selected": false}, {"value": "Candidatus Thorarchaeota", "label": "Candidatus Thorarchaeota", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1047749&tax_superkingdom=Archaea&tax_phylum=Candidatus+Thorarchaeota", "selected": false}, {"value": "Nanobdellota", "label": "Nanobdellota", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1047749&tax_superkingdom=Archaea&tax_phylum=Nanobdellota", "selected": false}, {"value": "Nitrososphaerota", "label": "Nitrososphaerota", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1047749&tax_superkingdom=Archaea&tax_phylum=Nitrososphaerota", "selected": false}, {"value": "Thermoplasmatota", "label": "Thermoplasmatota", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1047749&tax_superkingdom=Archaea&tax_phylum=Thermoplasmatota", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 201.24004399986006}