{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA1036688\" and tax_phylum = \"Chordata\"", "rows": [[169682, "PRJNA1036688_P_NODE_8741_length_185_cov_0.878378_g8449_i0", "PRJNA1036688", "8741", "185", "0.878378", "1.6249993", "Apus apus", "8895", "Chordata", "Chordata", "52.8", "0.016", "", "NTclustered", "gi|2323521672|ref|XM_051632190.1|", "8895", "g8449", "i0", "100", "0.756756756756757", "28", "0", "15", "0", "20", "47", "3274", "3301", "PREDICTED: Apus apus ankyrin repeat and fibronectin type-III domain-containing protein 1-like (LOC127390480), transcript variant X5, mRNA", "blastn", "140", "52.8", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Aves", "Apodiformes", "Apodidae", "Apus", "Apus apus"], [4836117, "PRJNA1036688_P_NODE_11184_length_159_cov_0.934426_g10892_i0", "PRJNA1036688", "11184", "159", "0.934426", "1.48573734", "Artiodactyla", "91561", "Chordata", "Chordata", "230", "5.67e-56", "", "NTclustered", "gi|2871638751|ref|XM_070463227.1|", "9874", "g10892", "i0", "93.038", "735.25786163522", "158", "10", "99", "1", "1", "157", "1306", "1149", "PREDICTED: Odocoileus virginianus centrosomal protein of 70 kDa-like (LOC110124377), transcript variant X10, mRNA", "blastn", "116906", "230", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Mammalia", "Artiodactyla", "Cervidae", "Odocoileus", "Odocoileus virginianus"], [5272523, "PRJNA1036688_P_NODE_6765_length_219_cov_2.120879_g6473_i0", "PRJNA1036688", "6765", "219", "2.120879", "4.64472501", "Metazoa", "33208", "Chordata", "Chordata", "114", "1.63e-29", "", "NR", "MBZ3884393.1", "30640", "g6473", "i0", "76.3", "3.97260273972603", "76", "15", "100", "1", "1", "219", "29", "104", "MBZ3884393.1 40S ribosomal protein S2 [Sciurus carolinensis]", "diamond", "870", "114", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Mammalia", "Rodentia", "Sciuridae", "Sciurus", "Sciurus carolinensis"], [7822313, "PRJNA1036688_P_NODE_9087_length_180_cov_1.636364_g8795_i0", "PRJNA1036688", "9087", "180", "1.636364", "2.9454552", "Gallus gallus", "9031", "Chordata", "Chordata", "333", "4.87e-87", "", "NTclustered", "gi|2024360878|ref|XR_005840240.1|", "9031", "g8795", "i0", "100", "91.5055555555556", "180", "0", "100", "0", "1", "180", "661", "840", "PREDICTED: Gallus gallus 28S ribosomal RNA (LOC121106977), rRNA", "blastn", "16471", "333", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Aves", "Galliformes", "Phasianidae", "Gallus", "Gallus gallus"], [9936187, "PRJNA1036688_P_NODE_3228_length_365_cov_2.445122_g2937_i0", "PRJNA1036688", "3228", "365", "2.445122", "8.9246953", "Fringillidae", "9133", "Chordata", "Chordata", "56.5", "0.003", "", "NTclustered", "gi|2917691352|emb|OZ228803.1|", "37598", "g2937", "i0", "100", "2.87123287671233", "30", "0", "8", "0", "328", "357", "4884895", "4884866", "Fringilla coelebs genome assembly, chromosome: 24", "blastn", "1048", "56.5", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Aves", "Passeriformes", "Fringillidae", "Fringilla", "Fringilla coelebs"], [13761496, "PRJNA1036688_P_NODE_8411_length_189_cov_3.111842_g8119_i0", "PRJNA1036688", "8411", "189", "3.111842", "5.88138138", "Artiodactyla", "91561", "Chordata", "Chordata", "342", "8.589999999999999e-90", "", "NTclustered", "gi|2871702816|ref|XM_070457416.1|", "9874", "g8119", "i0", "99.468", "1428.42328042328", "188", "1", "99", "0", "2", "189", "472", "659", "PREDICTED: Odocoileus virginianus zinc finger and BTB domain containing 44 (ZBTB44), transcript variant X2, mRNA", "blastn", "269972", "342", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Mammalia", "Artiodactyla", "Cervidae", "Odocoileus", "Odocoileus virginianus"], [16746654, "PRJNA1036688_P_NODE_6994_length_214_cov_2.203390_g6702_i0", "PRJNA1036688", "6994", "214", "2.20339", "4.7152546", "Gallus gallus", "9031", "Chordata", "Chordata", "396", "7.559999999999996e-106", "", "NTclustered", "gi|2024360878|ref|XR_005840240.1|", "9031", "g6702", "i0", "100", "107.31308411215", "214", "0", "100", "0", "1", "214", "4355", "4142", "PREDICTED: Gallus gallus 28S ribosomal RNA (LOC121106977), rRNA", "blastn", "22965", "396", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Aves", "Galliformes", "Phasianidae", "Gallus", "Gallus gallus"], [20134498, "PRJNA1036688_P_NODE_8516_length_188_cov_1.019868_g8224_i0", "PRJNA1036688", "8516", "188", "1.019868", "1.91735184", "Lepidosauria", "8504", "Chordata", "Chordata", "60.2", "9.63e-5", "", "NTclustered", "gi|2118978504|ref|XR_006362838.1|", "7888", "g8224", "i0", "88", "4.95212765957447", "50", "6", "27", "0", "32", "81", "1626", "1577", "PREDICTED: Protopterus annectens 28S ribosomal RNA (LOC122789521), rRNA", "blastn", "931", "60.2", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", null, "Ceratodontiformes", "Protopteridae", "Protopterus", "Protopterus annectens"], [21410114, "PRJNA1036688_P_NODE_12037_length_152_cov_1.313043_g11745_i0", "PRJNA1036688", "12037", "152", "1.313043", "1.99582536", "Bos", "9903", "Chordata", "Chordata", "270", "3.15e-68", "", "NTclustered", "gi|226437713|gb|AC150644.6|", "9913", "g11745", "i0", "98.684", "758.381578947368", "152", "2", "100", "0", "1", "152", "90603", "90754", "Bos taurus BAC CH240-223I2 (Children's Hospital Oakland Research Institute Bovine BAC Library complete sequence", "blastn", "115274", "270", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Mammalia", "Artiodactyla", "Bovidae", "Bos", "Bos taurus"], [28290380, "PRJNA1036688_P_NODE_8226_length_192_cov_1.496774_g7934_i0", "PRJNA1036688", "8226", "192", "1.496774", "2.87380608", "root", "1", "Root_unresolved", "Root_unresolved", "139", "8.999999999999999e-37", "", "NR", "XP_030110853.2", "10090", "g7934", "i0", "100", "15.75", "63", "0", "98.4", "0", "2", "190", "170", "232", "XP_030110853.2 uncharacterized protein Gm42427, partial [Mus musculus]", "diamond", "3024", "139", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Mammalia", "Rodentia", "Muridae", "Mus", "Mus musculus"], [28898284, "PRJNA1036688_P_NODE_7148_length_211_cov_1.545977_g6856_i0", "PRJNA1036688", "7148", "211", "1.545977", "3.26201147", "Polypterus senegalus", "55291", "Chordata", "Chordata", "45.8", "0.00189", "", "NR", "KAG2469876.1", "55291", "g6856", "i0", "64.3", "10.3791469194313", "28", "10", "39.8", "0", "209", "126", "299", "326", "KAG2469876.1 TC1A transposase, partial [Polypterus senegalus]", "diamond", "2190", "45.8", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Cladistia", "Polypteriformes", "Polypteridae", "Polypterus", "Polypterus senegalus"], [29088026, "PRJNA1036688_P_NODE_9428_length_176_cov_1.676259_g9136_i0", "PRJNA1036688", "9428", "176", "1.676259", "2.95021584", "Staurois parvus", "386267", "Chordata", "Chordata", "44.7", "3.23e-4", "", "NR", "CAI9580978.1", "386267", "g9136", "i0", "56.1", "0.698863636363636", "41", "18", "69.9", "0", "27", "149", "1", "41", "CAI9580978.1 unnamed protein product, partial [Staurois parvus]", "diamond", "123", "44.7", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Amphibia", "Anura", "Ranidae", "Staurois", "Staurois parvus"], [29308810, "PRJNA1036688_P_NODE_8469_length_188_cov_2.821192_g8177_i0", "PRJNA1036688", "8469", "188", "2.821192", "5.30384096", "Bufotes viridis", "30338", "Chordata", "Chordata", "42.7", "0.018", "", "NR", "CAK8609802.1", "30338", "g8177", "i0", "52.9", "1.78723404255319", "34", "16", "54.3", "0", "107", "6", "1", "34", "CAK8609802.1 Lamina-associated polypeptide 2, isoform alpha [Bufotes viridis]", "diamond", "336", "42.7", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Amphibia", "Anura", "Bufonidae", "Bufotes", "Bufotes viridis"], [30406681, "PRJNA1036688_P_NODE_11813_length_153_cov_19.672414_g11521_i0", "PRJNA1036688", "11813", "153", "19.672414", "30.09879342", "Opisthokonta", "33154", "Chordata", "Chordata", "40.8", "0.0169", "", "NR", "NWZ51675.1", "8969", "g11521", "i0", "69.2", "2.54901960784314", "26", "8", "51", "0", "153", "76", "6", "31", "NWZ51675.1 ZN252 protein [Haliaeetus albicilla]", "diamond", "390", "40.8", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Aves", "Accipitriformes", "Accipitridae", "Haliaeetus", "Haliaeetus albicilla"], [32564850, "PRJNA1036688_P_NODE_11419_length_157_cov_0.966667_g11127_i0", "PRJNA1036688", "11419", "157", "0.966667", "1.51766719", "Tricholaema leucomelas", "240729", "Chordata", "Chordata", "43.5", "9.45e-4", "", "NR", "NXX49186.1", "240729", "g11127", "i0", "38.6", "2.56050955414013", "44", "27", "84.1", "0", "134", "3", "2", "45", "NXX49186.1 Z585A protein [Tricholaema leucomelas]", "diamond", "402", "43.5", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Aves", "Piciformes", "Lybiidae", "Tricholaema lacrymosa", "Tricholaema leucomelas"]], "truncated": false, "filtered_table_rows_count": 15, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_phylum\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA1036688", "p1": "Chordata"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1036688&tax_phylum=Chordata", "results": [{"value": "PRJNA1036688", "label": "PRJNA1036688", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_phylum=Chordata", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1036688&tax_phylum=Chordata", "results": [{"value": "blastn", "label": "blastn", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1036688&tax_phylum=Chordata&analysis=blastn", "selected": false}, {"value": "diamond", "label": "diamond", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1036688&tax_phylum=Chordata&analysis=diamond", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1036688&tax_phylum=Chordata", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1036688&tax_phylum=Chordata&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1036688&tax_phylum=Chordata", "results": [{"value": "Opisthokonta", "label": "Opisthokonta", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1036688&tax_phylum=Chordata&tax_clade=Opisthokonta", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1036688&tax_phylum=Chordata", "results": [{"value": "Metazoa", "label": "Metazoa", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1036688&tax_phylum=Chordata&tax_kingdom=Metazoa", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1036688&tax_phylum=Chordata", "results": [{"value": "Chordata", "label": "Chordata", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1036688", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 247.95290699694306}