{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA1028258\", tax_clade = \"PVC group\" and tax_phylum = \"Chlamydiota\"", "rows": [[7816154, "PRJNA1028258_P_NODE_137347_length_234_cov_0.860606_g136784_i0", "PRJNA1028258", "137347", "234", "0.860606", "2.01381804", "Chlamydiales bacterium", "2047757", "Bacteria", "Bacteria", "116", "2.27e-30", "", "NR", "MDR3624404.1", "2047757", "g136784", "i0", "71.4", "5.93589743589744", "77", "22", "98.7", "0", "1", "231", "20", "96", "MDR3624404.1 superoxide dismutase [Chlamydiales bacterium]", "diamond", "1389", "116", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "Chlamydiales bacterium"], [16741956, "PRJNA1028258_P_NODE_51654_length_353_cov_2.000000_g51091_i0", "PRJNA1028258", "51654", "353", "2", "7.06", "Chlamydiales bacterium", "2047757", "Bacteria", "Bacteria", "206", "6.189999999999999e-66", "", "NR", "MCP5470421.1", "2047757", "g51091", "i0", "83.8", "0.994334277620397", "117", "19", "99.4", "0", "352", "2", "4", "120", "MCP5470421.1 hypothetical protein [Chlamydiales bacterium]", "diamond", "351", "206", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "Chlamydiales bacterium"], [27035057, "PRJNA1028258_P_NODE_42162_length_389_cov_2.662500_g41599_i0", "PRJNA1028258", "42162", "389", "2.6625", "10.357125", "Chlamydiales bacterium", "2047757", "Bacteria", "Bacteria", "221", "1.64e-71", "", "NR", "MCP5470421.1", "2047757", "g41599", "i0", "82.9", "1.98971722365039", "129", "22", "99.5", "0", "2", "388", "4", "132", "MCP5470421.1 hypothetical protein [Chlamydiales bacterium]", "diamond", "774", "221", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "Chlamydiales bacterium"], [27824909, "PRJNA1028258_P_NODE_132844_length_235_cov_0.855422_g132281_i0", "PRJNA1028258", "132844", "235", "0.855422", "2.0102417", "Parachlamydiales bacterium", "2052178", "Bacteria", "Bacteria", "81.3", "6.98e-16", "", "NR", "MBX7066361.1", "2052178", "g132281", "i0", "54.8", "0.931914893617021", "73", "33", "93.2", "0", "9", "227", "103", "175", "MBX7066361.1 MFS transporter [Parachlamydiales bacterium]", "diamond", "219", "81.3", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", null, null, "Parachlamydiales bacterium"], [28266624, "PRJNA1028258_P_NODE_6446_length_960_cov_3.043771_g6097_i0", "PRJNA1028258", "6446", "960", "3.043771", "29.2202016", "Simkania sp.", "34094", "Bacteria", "Bacteria", "256", "3.9e-81", "", "NR", "MCB1084310.1", "34094", "g6097", "i0", "75.9", "0.53125", "170", "41", "53.1", "0", "710", "201", "1", "170", "MCB1084310.1 hypothetical protein [Simkania sp.]", "diamond", "510", "256", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Simkaniaceae", "Simkania", "Simkania sp."], [28329858, "PRJNA1028258_P_NODE_155866_length_230_cov_0.881988_g155303_i0", "PRJNA1028258", "155866", "230", "0.881988", "2.0285724", "Chlamydiia bacterium", "2052156", "Bacteria", "Bacteria", "42.4", "0.0434", "", "NR", "MCB1107454.1", "2052156", "g155303", "i0", "48.4", "0.808695652173913", "62", "30", "79.6", "2", "215", "33", "28", "88", "MCB1107454.1 hypothetical protein [Chlamydiia bacterium]", "diamond", "186", "42.4", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", null, null, null, "Chlamydiia bacterium"], [28645852, "PRJNA1028258_P_NODE_180607_length_217_cov_2.567568_g180044_i0", "PRJNA1028258", "180607", "217", "2.567568", "5.57162256", "Chlamydia psittaci", "83554", "Bacteria", "Bacteria", "90.9", "2.91e-22", "", "NR", "EPP28937.1", "1112246", "g180044", "i0", "96.9", "0.884792626728111", "64", "2", "88.5", "0", "21", "212", "1", "64", "EPP28937.1 hypothetical protein CP082626L3_1649 [Chlamydia psittaci 08-2626_L3]", "diamond", "192", "90.9", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", "Chlamydiaceae", "Chlamydia", "Chlamydia psittaci"], [28929909, "PRJNA1028258_P_NODE_30168_length_462_cov_2.346056_g29607_i0", "PRJNA1028258", "30168", "462", "2.346056", "10.83877872", "Chlamydiales bacterium", "2047757", "Bacteria", "Bacteria", "143", "2.12e-40", "", "NR", "MCP5470420.1", "2047757", "g29607", "i0", "60.4", "0.902597402597403", "139", "53", "90.3", "1", "2", "418", "9", "145", "MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium]", "diamond", "417", "143", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "Chlamydiales bacterium"], [29087900, "PRJNA1028258_P_NODE_34988_length_428_cov_2.373259_g34425_i0", "PRJNA1028258", "34988", "428", "2.373259", "10.15754852", "Chlamydiales bacterium", "2047757", "Bacteria", "Bacteria", "223", "2.3799999999999996e-72", "", "NR", "MCP5470421.1", "2047757", "g34425", "i0", "83.1", "1.82242990654206", "130", "22", "91.1", "0", "426", "37", "3", "132", "MCP5470421.1 hypothetical protein [Chlamydiales bacterium]", "diamond", "780", "223", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "Chlamydiales bacterium"], [29371984, "PRJNA1028258_P_NODE_26789_length_491_cov_2.018957_g26229_i0", "PRJNA1028258", "26789", "491", "2.018957", "9.91307887", "Chlamydiales bacterium", "2047757", "Bacteria", "Bacteria", "162", "1.13e-47", "", "NR", "MCP5470420.1", "2047757", "g26229", "i0", "60.1", "0.873727087576375", "143", "57", "87.4", "0", "491", "63", "5", "147", "MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium]", "diamond", "429", "162", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "Chlamydiales bacterium"], [29592499, "PRJNA1028258_P_NODE_124830_length_240_cov_1.660819_g124267_i0", "PRJNA1028258", "124830", "240", "1.660819", "3.9859656", "Chlamydiales bacterium", "2047757", "Bacteria", "Bacteria", "125", "6.5e-34", "", "NR", "MFN0065451.1", "2047757", "g124267", "i0", "72.6", "0.9125", "73", "20", "91.3", "0", "220", "2", "3", "75", "MFN0065451.1 superoxide dismutase [Chlamydiales bacterium]", "diamond", "219", "125", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "Chlamydiales bacterium"], [29687350, "PRJNA1028258_P_NODE_49930_length_359_cov_1.406897_g49367_i0", "PRJNA1028258", "49930", "359", "1.406897", "5.05076023", "Chlamydiales bacterium", "2047757", "Bacteria", "Bacteria", "87.8", "3.54e-19", "", "NR", "MCP5470420.1", "2047757", "g49367", "i0", "81.8", "0.459610027855153", "55", "10", "46", "0", "357", "193", "27", "81", "MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium]", "diamond", "165", "87.8", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "Chlamydiales bacterium"], [29782377, "PRJNA1028258_P_NODE_75851_length_296_cov_0.938326_g75288_i0", "PRJNA1028258", "75851", "296", "0.938326", "2.77744496", "Simkania sp.", "34094", "Bacteria", "Bacteria", "166", "3.93e-49", "", "NR", "MCB1084310.1", "34094", "g75288", "i0", "85.7", "0.993243243243243", "98", "14", "99.3", "0", "1", "294", "9", "106", "MCB1084310.1 hypothetical protein [Simkania sp.]", "diamond", "294", "166", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Simkaniaceae", "Simkania", "Simkania sp."], [30003617, "PRJNA1028258_P_NODE_82071_length_284_cov_2.613953_g81508_i0", "PRJNA1028258", "82071", "284", "2.613953", "7.42362652", "Simkania sp.", "34094", "Bacteria", "Bacteria", "103", "7.85e-25", "", "NR", "MCB1084310.1", "34094", "g81508", "i0", "65.8", "0.77112676056338", "73", "25", "77.1", "0", "284", "66", "98", "170", "MCB1084310.1 hypothetical protein [Simkania sp.]", "diamond", "219", "103", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Simkaniaceae", "Simkania", "Simkania sp."], [30153287, "PRJNA1028258_P_NODE_50772_length_356_cov_1.731707_g50209_i0", "PRJNA1028258", "50772", "356", "1.731707", "6.16487692", "root", "1", "Root_unresolved", "Root_unresolved", "150", "9.749999999999999e-43", "", "NR", "MCB1084310.1", "34094", "g50209", "i0", "64.1", "1.98033707865169", "117", "42", "98.6", "0", "354", "4", "29", "145", "MCB1084310.1 hypothetical protein [Simkania sp.]", "diamond", "705", "150", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Simkaniaceae", "Simkania", "Simkania sp."], [30161201, "PRJNA1028258_P_NODE_162972_length_228_cov_0.893082_g162409_i0", "PRJNA1028258", "162972", "228", "0.893082", "2.03622696", "Parachlamydia sp.", "2052048", "Bacteria", "Bacteria", "48.5", "2.77e-4", "", "NR", "MCE2982390.1", "2052048", "g162409", "i0", "38.2", "1", "76", "35", "88.2", "2", "219", "19", "74", "146", "MCE2982390.1 hypothetical protein [Parachlamydia sp.]", "diamond", "228", "48.5", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", "Parachlamydia", "Parachlamydia sp."], [30477545, "PRJNA1028258_P_NODE_43713_length_383_cov_1.280255_g43150_i0", "PRJNA1028258", "43713", "383", "1.280255", "4.90337665", "Chlamydiales bacterium", "2047757", "Bacteria", "Bacteria", "186", "1.06e-57", "", "NR", "MCP5470420.1", "2047757", "g43150", "i0", "78.6", "0.986945169712794", "126", "25", "98.7", "1", "381", "4", "7", "130", "MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium]", "diamond", "378", "186", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "Chlamydiales bacterium"], [30793249, "PRJNA1028258_P_NODE_137114_length_234_cov_0.860606_g136551_i0", "PRJNA1028258", "137114", "234", "0.860606", "2.01381804", "Chlamydia psittaci", "83554", "Bacteria", "Bacteria", "93.6", "4.25e-23", "", "NR", "EPP28276.1", "1112246", "g136551", "i0", "90.4", "0.935897435897436", "73", "7", "93.6", "0", "2", "220", "3", "75", "EPP28276.1 putative membrane protein [Chlamydia psittaci 08-2626_L3]", "diamond", "219", "93.6", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", "Chlamydiaceae", "Chlamydia", "Chlamydia psittaci"], [31203642, "PRJNA1028258_P_NODE_35215_length_427_cov_1.351955_g34652_i0", "PRJNA1028258", "35215", "427", "1.351955", "5.77284785", "Chlamydia psittaci 1", "83554", "Bacteria", "Bacteria", "53.5", "2.24e-6", "", "NR", "EPP36379.1", "1238236", "g34652", "i0", "100", "0.154566744730679", "22", "0", "15.5", "0", "346", "281", "1", "22", "EPP36379.1 hypothetical protein CP10743SC13_1075, partial [Chlamydia psittaci 10_743_SC13]", "diamond", "66", "53.5", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", "Chlamydiaceae", "Chlamydia", "Chlamydia psittaci"], [31322610, "PRJNA1028258_P_NODE_165395_length_227_cov_1.797468_g164832_i0", "PRJNA1028258", "165395", "227", "1.797468", "4.08025236", "root", "1", "Root_unresolved", "Root_unresolved", "122", "1.32e-33", "", "NR", "MCB1084350.1", "34094", "g164832", "i0", "71.6", "1.95594713656388", "74", "21", "97.8", "0", "2", "223", "1", "74", "MCB1084350.1 MC/SLC25 family protein [Simkania sp.]", "diamond", "444", "122", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Simkaniaceae", "Simkania", "Simkania sp."], [31552232, "PRJNA1028258_P_NODE_127056_length_238_cov_2.100592_g126493_i0", "PRJNA1028258", "127056", "238", "2.100592", "4.99940896", "Chlamydiales bacterium", "2047757", "Bacteria", "Bacteria", "132", "1.4799999999999998e-37", "", "NR", "MCP5470420.1", "2047757", "g126493", "i0", "86.5", "0.932773109243697", "74", "10", "93.3", "0", "1", "222", "8", "81", "MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium]", "diamond", "222", "132", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "Chlamydiales bacterium"], [31646760, "PRJNA1028258_P_NODE_67897_length_311_cov_1.595041_g67334_i0", "PRJNA1028258", "67897", "311", "1.595041", "4.96057751", "Waddliaceae bacterium", "2026802", "Bacteria", "Bacteria", "72", "3.22e-12", "", "NR", "HEY4831209.1", "2026802", "g67334", "i0", "46", "1.44694533762058", "87", "45", "82", "1", "303", "49", "266", "352", "HEY4831209.1 F0F1 ATP synthase subunit alpha [Waddliaceae bacterium]", "diamond", "450", "72", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Waddliaceae", null, "Waddliaceae bacterium"], [32050232, "PRJNA1028258_P_NODE_57378_length_336_cov_1.329588_g56815_i0", "PRJNA1028258", "57378", "336", "1.329588", "4.46741568", "root", "1", "Root_unresolved", "Root_unresolved", "137", "5.53e-39", "", "NR", "MCB1084326.1", "34094", "g56815", "i0", "77.4", "3", "84", "19", "75", "0", "84", "335", "7", "90", "MCB1084326.1 serine/threonine-protein kinase [Simkania sp.]", "diamond", "1008", "138", "0.992753623188406", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Simkaniaceae", "Simkania", "Simkania sp."], [32089843, "PRJNA1028258_P_NODE_89198_length_273_cov_1.181373_g88635_i0", "PRJNA1028258", "89198", "273", "1.181373", "3.22514829", "Chlamydia psittaci 84-8471/1", "1112230", "Bacteria", "Bacteria", "66.2", "4.58e-12", "", "NR", "EPP35918.1", "1112230", "g88635", "i0", "69.6", "0.505494505494505", "46", "14", "50.5", "0", "187", "50", "1", "46", "EPP35918.1 hypothetical protein CP8484711_2945, partial [Chlamydia psittaci 84-8471/1]", "diamond", "138", "66.2", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", "Chlamydiaceae", "Chlamydia", "Chlamydia psittaci"], [32501405, "PRJNA1028258_P_NODE_80419_length_288_cov_0.853881_g79856_i0", "PRJNA1028258", "80419", "288", "0.853881", "2.45917728", "Chlamydia psittaci", "83554", "Bacteria", "Bacteria", "68.6", "2.4e-12", "", "NR", "EPP29195.1", "1112246", "g79856", "i0", "95.1", "0.427083333333333", "41", "2", "42.7", "0", "2", "124", "6", "46", "EPP29195.1 putative membrane protein, partial [Chlamydia psittaci 08-2626_L3]", "diamond", "123", "68.6", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", "Chlamydiaceae", "Chlamydia", "Chlamydia psittaci"], [32658525, "PRJNA1028258_P_NODE_136860_length_234_cov_0.860606_g136297_i0", "PRJNA1028258", "136860", "234", "0.860606", "2.01381804", "Chlamydiota bacterium", "2081524", "Bacteria", "Bacteria", "43.1", "0.0232", "", "NR", "MBM3208012.1", "2081524", "g136297", "i0", "36.3", "1.02564102564103", "80", "41", "97.4", "4", "3", "230", "130", "203", "MBM3208012.1 hypothetical protein [Chlamydiota bacterium]", "diamond", "240", "43.1", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", null, null, null, null, "Chlamydiota bacterium"]], "truncated": false, "filtered_table_rows_count": 26, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA1028258", "p1": "PVC group", "p2": "Chlamydiota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1028258&tax_clade=PVC+group&tax_phylum=Chlamydiota", "results": [{"value": "PRJNA1028258", "label": "PRJNA1028258", "count": 26, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=PVC+group&tax_phylum=Chlamydiota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1028258&tax_clade=PVC+group&tax_phylum=Chlamydiota", "results": [{"value": "diamond", "label": "diamond", "count": 26, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1028258&tax_clade=PVC+group&tax_phylum=Chlamydiota&analysis=diamond", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1028258&tax_clade=PVC+group&tax_phylum=Chlamydiota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 26, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1028258&tax_clade=PVC+group&tax_phylum=Chlamydiota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1028258&tax_clade=PVC+group&tax_phylum=Chlamydiota", "results": [{"value": "PVC group", "label": "PVC group", "count": 26, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1028258&tax_phylum=Chlamydiota", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1028258&tax_clade=PVC+group&tax_phylum=Chlamydiota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 26, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1028258&tax_clade=PVC+group&tax_phylum=Chlamydiota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1028258&tax_clade=PVC+group&tax_phylum=Chlamydiota", "results": [{"value": "Chlamydiota", "label": "Chlamydiota", "count": 26, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1028258&tax_clade=PVC+group", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 306.6786669951398}