{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA1009807\", tax_clade = \"PVC group\" and tax_phylum = \"Verrucomicrobiota\"", "rows": [[154795, "PRJNA1009807_S_NODE_1141_length_285_cov_3.467480_g1113_i0", "PRJNA1009807", "1141", "285", "3.46748", "9.882318", "uncultured Verrucomicrobiae bacterium", "412056", "Bacteria", "Bacteria", "383", "8.22e-102", "", "NTclustered", "gi|2874253690|emb|OY969416.1|", "412056", "g1113", "i0", "90.941", "179.733333333333", "287", "23", "99", "3", "2", "285", "1315815", "1315529", "MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1", "blastn", "51224", "383", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", null, null, null, "uncultured Verrucomicrobiae bacterium"], [154814, "PRJNA1009807_S_NODE_21_length_1232_cov_20.537301_g7_i1", "PRJNA1009807", "21", "1232", "20.537301", "253.01954832", "Rubellicoccus peritrichatus", "3080537", "Bacteria", "Bacteria", "994", "0", "", "NTclustered", "gi|2605121622|gb|CP136920.1|", "3080537", "g7", "i1", "82.288", "228.801948051948", "1180", "179", "94", "27", "59", "1221", "2162478", "2161312", "Rubellicoccus peritrichatus strain CR14 isolate coral tank chromosome, complete genome", "blastn", "281884", "994", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Opitutia", "Puniceicoccales", "Cerasicoccaceae", "Rubellicoccus", "Rubellicoccus peritrichatus"], [6532996, "PRJNA1009807_S_NODE_3146_length_182_cov_1.342657_g3118_i0", "PRJNA1009807", "3146", "182", "1.342657", "2.44363574", "Akkermansia glycaniphila", "1679444", "Bacteria", "Bacteria", "97.1", "7.05e-16", "", "NTclustered", "gi|1093279401|emb|LT629973.1|", "1679444", "g3118", "i0", "81.897", "27.4285714285714", "116", "19", "63", "2", "66", "180", "2888785", "2888899", "Akkermansia glycaniphila isolate APytT genome assembly, chromosome: I", "blastn", "4992", "97.1", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Akkermansiaceae", "Akkermansia", "Akkermansia glycaniphila"], [9929410, "PRJNA1009807_S_NODE_3768_length_169_cov_1.700000_g3740_i0", "PRJNA1009807", "3768", "169", "1.7", "2.873", "Opitutaceae", "134623", "Bacteria", "Bacteria", "285", "1.28e-72", "", "NTclustered", "gi|164510706|emb|AJ966885.1|", "134634", "g3740", "i0", "97.041", "25.585798816568", "169", "5", "100", "0", "1", "169", "3073", "3241", "Opitutus sp. VeGlc2 16S rRNA gene (partial), 23S rRNA gene, tRNA-Ala gene, tRNA-Ile gene, ITS1 and ITS2, strain DSM 11246", "blastn", "4324", "285", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Opitutia", "Opitutales", "Opitutaceae", "Opitutus", "Opitutus sp. VeGlc2"], [9929419, "PRJNA1009807_S_NODE_768_length_337_cov_14.412752_g740_i0", "PRJNA1009807", "768", "337", "14.412752", "48.57097424", "Akkermansia", "239934", "Bacteria", "Bacteria", "545", "1.1999999999999999e-150", "", "NTclustered", "gi|2756360508|gb|CP156688.1|", "239935", "g740", "i0", "95.846", "294.477744807122", "337", "14", "100", "0", "1", "337", "360541", "360205", "Akkermansia muciniphila strain AKK-TMU chromosome, complete genome", "blastn", "99239", "545", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Akkermansiaceae", "Akkermansia", "Akkermansia muciniphila"], [11204690, "PRJNA1009807_S_NODE_269_length_507_cov_16.989316_g243_i0", "PRJNA1009807", "269", "507", "16.989316", "86.13583212", "Akkermansia", "239934", "Bacteria", "Bacteria", "621", "3.0099999999999995e-173", "", "NTclustered", "gi|2566450153|gb|CP114596.1|", "239935", "g243", "i0", "88.845", "300.173570019724", "511", "49", "100", "8", "1", "507", "321588", "322094", "Akkermansia muciniphila strain MmAkk2 chromosome, complete genome", "blastn", "152188", "621", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Akkermansiaceae", "Akkermansia", "Akkermansia muciniphila"], [18006555, "PRJNA1009807_S_NODE_3035_length_184_cov_2.317241_g3007_i0", "PRJNA1009807", "3035", "184", "2.317241", "4.26372344", "Luteolibacter luteus", "2728835", "Bacteria", "Bacteria", "91.6", "3.33e-14", "", "NTclustered", "gi|1835317346|gb|CP051774.1|", "2728835", "g3007", "i0", "87.5", "52.625", "80", "8", "43", "2", "1", "80", "3803573", "3803650", "Luteolibacter luteus strain G-1-1-1 chromosome, complete genome", "blastn", "9683", "91.6", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", "Luteolibacter", "Luteolibacter luteus"], [18853080, "PRJNA1009807_S_NODE_135_length_638_cov_20.824708_g116_i0", "PRJNA1009807", "135", "638", "20.824708", "132.86163704", "Akkermansia", "239934", "Bacteria", "Bacteria", "632", "1.7799999999999996e-176", "", "NTclustered", "gi|2756360508|gb|CP156688.1|", "239935", "g116", "i0", "84.664", "297.492163009404", "639", "93", "99", "4", "1", "637", "362730", "362095", "Akkermansia muciniphila strain AKK-TMU chromosome, complete genome", "blastn", "189800", "638", "0.990595611285266", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Akkermansiaceae", "Akkermansia", "Akkermansia muciniphila"], [18853093, "PRJNA1009807_S_NODE_235_length_532_cov_9.411765_g211_i0", "PRJNA1009807", "235", "532", "9.411765", "50.0705898", "Verrucomicrobiales", "48461", "Bacteria", "Bacteria", "558", "2.52e-154", "", "NTclustered", "gi|1093279401|emb|LT629973.1|", "1679444", "g211", "i0", "86.863", "283.332706766917", "510", "54", "95", "12", "30", "532", "909910", "910413", "Akkermansia glycaniphila isolate APytT genome assembly, chromosome: I", "blastn", "150733", "560", "0.996428571428571", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Akkermansiaceae", "Akkermansia", "Akkermansia glycaniphila"], [21831602, "PRJNA1009807_S_NODE_4578_length_156_cov_2.452991_g4550_i0", "PRJNA1009807", "4578", "156", "2.452991", "3.82666596", "uncultured Verrucomicrobiae bacterium", "412056", "Bacteria", "Bacteria", "267", "4.2199999999999997e-67", "", "NTclustered", "gi|2874253690|emb|OY969416.1|", "412056", "g4550", "i0", "97.436", "16.9935897435897", "156", "4", "100", "0", "1", "156", "1315869", "1316024", "MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1", "blastn", "2651", "267", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", null, null, null, "uncultured Verrucomicrobiae bacterium"]], "truncated": false, "filtered_table_rows_count": 10, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA1009807", "p1": "PVC group", "p2": "Verrucomicrobiota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1009807&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "PRJNA1009807", "label": "PRJNA1009807", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1009807&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "blastn", "label": "blastn", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1009807&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1009807&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1009807&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1009807&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "PVC group", "label": "PVC group", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1009807&tax_phylum=Verrucomicrobiota", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1009807&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1009807&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1009807&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "Verrucomicrobiota", "label": "Verrucomicrobiota", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1009807&tax_clade=PVC+group", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 211.79220000340138}