{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA1002816\" and tax_kingdom = \"Bacillati\"", "rows": [[1427595, "PRJNA1002816_P_NODE_16202_length_266_cov_1.264249_g16042_i0", "PRJNA1002816", "16202", "266", "1.264249", "3.36290234", "Staphylococcus epidermidis", "1282", "Bacteria", "Bacteria", "492", "1.2099999999999999e-134", "", "NTclustered", "gi|1214725545|gb|CP022247.1|", "1282", "g16042", "i0", "100", "103", "266", "0", "100", "0", "1", "266", "1163618", "1163883", "Staphylococcus epidermidis strain AMT chromosome, complete genome", "blastn", "27398", "492", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Staphylococcaceae", "Staphylococcus", "Staphylococcus epidermidis"], [2276026, "PRJNA1002816_P_NODE_20422_length_242_cov_0.911243_g20262_i0", "PRJNA1002816", "20422", "242", "0.911243", "2.20520806", "Cutibacterium", "1912216", "Bacteria", "Bacteria", "448", "2.3799999999999995e-121", "", "NTclustered", "gi|966542502|gb|CP012354.1|", "1747", "g20262", "i0", "100", "53", "242", "0", "100", "0", "1", "242", "301503", "301262", "Cutibacterium acnes strain PA_12_1_L1 chromosome, complete genome", "blastn", "12826", "448", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Propionibacteriales", "Propionibacteriaceae", "Cutibacterium", "Cutibacterium acnes"], [3551475, "PRJNA1002816_P_NODE_18743_length_247_cov_1.609195_g18583_i0", "PRJNA1002816", "18743", "247", "1.609195", "3.97471165", "Bacillota", "1239", "Bacteria", "Bacteria", "313", "9.28e-81", "", "NTclustered", "gi|1829696622|gb|CP048837.1|", "1522", "g18583", "i0", "89.474", "616.080971659919", "247", "26", "100", "0", "1", "247", "489456", "489702", "[Clostridium] innocuum strain LC-LUMC-CI-001 chromosome, complete genome", "blastn", "152172", "313", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Eubacteriales", "Clostridiaceae", "Clostridium", "[Clostridium] innocuum"], [5255891, "PRJNA1002816_P_NODE_6025_length_463_cov_0.984615_g5865_i0", "PRJNA1002816", "6025", "463", "0.984615", "4.55876745", "Janibacter alittae", "3115209", "Bacteria", "Bacteria", "52.8", "0.045", "", "NTclustered", "gi|2699100502|gb|CP144913.1|", "3115209", "g5865", "i0", "100", "0.060475161987041", "28", "0", "6", "0", "27", "54", "2068457", "2068430", "Janibacter alittae strain A1S7 chromosome, complete genome", "blastn", "28", "52.8", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Intrasporangiaceae", "Janibacter", "Janibacter alittae"], [7805375, "PRJNA1002816_P_NODE_15127_length_279_cov_1.470874_g14967_i0", "PRJNA1002816", "15127", "279", "1.470874", "4.10373846", "Eubacteriales", "186802", "Bacteria", "Bacteria", "125", "1.5099999999999999e-32", "", "NR", "MCQ2484223.1", "2044939", "g14967", "i0", "64.1", "4.8494623655914", "92", "31", "98.9", "1", "277", "2", "157", "246", "MCQ2484223.1 aspartate--ammonia ligase [Clostridia bacterium]", "diamond", "1353", "125", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", null, null, null, "Clostridia bacterium"], [9080356, "PRJNA1002816_P_NODE_17788_length_250_cov_0.870056_g17628_i0", "PRJNA1002816", "17788", "250", "0.870056", "2.17514", "uncultured Actinomycetes bacterium", "152507", "Bacteria", "Bacteria", "193", "1.28e-44", "", "NTclustered", "gi|2874253820|emb|OY969804.1|", "152507", "g17628", "i0", "81.25", "779.408", "256", "32", "97", "13", "1", "243", "1502361", "1502109", "MAG: uncultured Actinomycetes bacterium isolate MFD00731.bin.c.4 genome assembly, chromosome: 1", "blastn", "194852", "193", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", null, null, null, "uncultured Actinomycetes bacterium"], [11631609, "PRJNA1002816_P_NODE_8630_length_382_cov_1.449838_g8470_i0", "PRJNA1002816", "8630", "382", "1.449838", "5.53838116", "Microbacteriaceae bacterium", "1873462", "Bacteria", "Bacteria", "211", "8.82e-67", "", "NR", "MBX9718074.1", "1873462", "g8470", "i0", "86.2", "0.910994764397906", "116", "16", "91.1", "0", "29", "376", "84", "199", "MBX9718074.1 30S ribosomal protein S17 [Microbacteriaceae bacterium]", "diamond", "348", "211", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Microbacteriaceae", null, "Microbacteriaceae bacterium"], [13754318, "PRJNA1002816_P_NODE_5051_length_505_cov_1.662037_g4891_i0", "PRJNA1002816", "5051", "505", "1.662037", "8.39328685", "Streptomyces", "1883", "Bacteria", "Bacteria", "52.8", "0.049", "", "NTclustered", "gi|1031970216|gb|CP015726.1|", "1841249", "g4891", "i0", "100", "0.221782178217822", "28", "0", "6", "0", "287", "314", "5907228", "5907201", "Streptomyces sp. RTd22, complete genome", "blastn", "112", "52.8", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Kitasatosporales", "Streptomycetaceae", "Streptomyces", "Streptomyces sp. RTd22"], [15455677, "PRJNA1002816_P_NODE_7513_length_413_cov_0.920588_g7353_i0", "PRJNA1002816", "7513", "413", "0.920588", "3.80202844", "Actinacidiphila reveromycinica", "659352", "Bacteria", "Bacteria", "52.8", "0.04", "", "NTclustered", "gi|1950600667|dbj|AP018365.1|", "659352", "g7353", "i0", "100", "0.0677966101694915", "28", "0", "7", "0", "87", "114", "7904421", "7904448", "Streptomyces sp. SN-593 DNA, nearly complete genome", "blastn", "28", "52.8", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Kitasatosporales", "Streptomycetaceae", "Actinacidiphila", "Actinacidiphila reveromycinica"], [16303374, "PRJNA1002816_P_NODE_15993_length_269_cov_1.178571_g15833_i0", "PRJNA1002816", "15993", "269", "1.178571", "3.17035599", "Planococcus", "1372", "Bacteria", "Bacteria", "54.7", "0.007", "", "NTclustered", "gi|2533127305|gb|CP129238.1|", "3058394", "g15833", "i0", "94.444", "0.267657992565056", "36", "0", "13", "2", "85", "118", "2051125", "2051090", "Planococcus liqunii strain N056 chromosome, complete genome", "blastn", "72", "54.7", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Caryophanaceae", "Planococcus", "Planococcus liqunii"], [25227113, "PRJNA1002816_P_NODE_9920_length_354_cov_3.861210_g9760_i0", "PRJNA1002816", "9920", "354", "3.86121", "13.6686834", "root", "1", "Root_unresolved", "Root_unresolved", "649", "0", "", "NTclustered", "gi|1368665179|gb|CP027782.1|", "1513", "g9760", "i0", "99.718", "123.737288135593", "354", "1", "100", "0", "1", "354", "2809521", "2809168", "Clostridium tetani strain Mfbjulcb2 chromosome, complete genome", "blastn", "43803", "649", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Eubacteriales", "Clostridiaceae", "Clostridium", "Clostridium tetani"], [27571570, "PRJNA1002816_P_NODE_13004_length_307_cov_0.987179_g12844_i0", "PRJNA1002816", "13004", "307", "0.987179", "3.03063953", "Kitasatospora gansuensis", "258050", "Bacteria", "Bacteria", "43.5", "0.0183", "", "NR", "MFD0572961.1", "258050", "g12844", "i0", "33.8", "1.27035830618892", "65", "41", "63.5", "1", "306", "112", "15", "77", "MFD0572961.1 hypothetical protein [Kitasatospora gansuensis]", "diamond", "390", "43.5", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Kitasatosporales", "Streptomycetaceae", "Kitasatospora", "Kitasatospora gansuensis"], [27659058, "PRJNA1002816_P_NODE_13644_length_298_cov_1.022222_g13484_i0", "PRJNA1002816", "13644", "298", "1.022222", "3.04622156", "FCB group", "1783270", "Bacteria", "Bacteria", "122", "3.9999999999999997e-32", "", "NR", "WP_033675763.1", "574375", "g13484", "i0", "62.7", "4.19798657718121", "83", "31", "83.6", "0", "9", "257", "80", "162", "WP_033675763.1 type 1 glutamine amidotransferase domain-containing protein [Bacillus gaemokensis]", "diamond", "1251", "123", "0.991869918699187", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Bacillaceae", "Bacillus", "Bacillus gaemokensis"], [28265984, "PRJNA1002816_P_NODE_18946_length_247_cov_0.885057_g18786_i0", "PRJNA1002816", "18946", "247", "0.885057", "2.18609079", "Cyanobacteria bacterium P01_G01_bin.54", "3023307", "Bacteria", "Bacteria", "49.7", "1.05e-4", "", "NR", "MEM8642542.1", "3023307", "g18786", "i0", "32.1", "0.947368421052632", "78", "49", "89.9", "4", "2", "223", "83", "160", "MEM8642542.1 alpha-ketoglutarate-dependent dioxygenase AlkB [Cyanobacteria bacterium P01_G01_bin.54]", "diamond", "234", "49.7", "1", "Bacteria", "Cyanobacteriota/Melainabacteria group", "Bacillati", "Cyanobacteriota", null, null, null, null, "Cyanobacteria bacterium P01_G01_bin.54"], [28360803, "PRJNA1002816_P_NODE_9946_length_354_cov_1.096085_g9786_i0", "PRJNA1002816", "9946", "354", "1.096085", "3.8801409", "Exiguobacterium aurantiacum", "33987", "Bacteria", "Bacteria", "42.4", "0.0177", "", "NR", "WP_233005565.1", "33987", "g9786", "i0", "64.5", "0.26271186440678", "31", "11", "26.3", "0", "247", "339", "24", "54", "WP_233005565.1 hypothetical protein, partial [Exiguobacterium aurantiacum]", "diamond", "93", "42.4", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", null, "Exiguobacterium", "Exiguobacterium aurantiacum"], [29497572, "PRJNA1002816_P_NODE_4050_length_564_cov_1.674134_g3890_i0", "PRJNA1002816", "4050", "564", "1.674134", "9.44211576", "Conexibacter sp.", "1929289", "Bacteria", "Bacteria", "46.6", "0.0222", "", "NR", "HEX5147127.1", "1929289", "g3890", "i0", "41.9", "0.393617021276596", "74", "35", "36.2", "2", "245", "448", "124", "195", "HEX5147127.1 hypothetical protein [Conexibacter sp.]", "diamond", "222", "46.6", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Thermoleophilia", "Solirubrobacterales", "Conexibacteraceae", "Conexibacter", "Conexibacter sp."], [29718357, "PRJNA1002816_P_NODE_16930_length_257_cov_1.657609_g16770_i0", "PRJNA1002816", "16930", "257", "1.657609", "4.26005513", "Mycolicibacterium iranicum", "912594", "Bacteria", "Bacteria", "46.6", "0.00149", "", "NR", "WP_064281344.1", "912594", "g16770", "i0", "35.6", "0.688715953307393", "59", "37", "67.7", "1", "49", "222", "151", "209", "WP_064281344.1 GAP family protein [Mycolicibacterium iranicum]", "diamond", "177", "46.6", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Mycobacteriaceae", "Mycolicibacterium", "Mycolicibacterium iranicum"], [29781714, "PRJNA1002816_P_NODE_16411_length_263_cov_2.142105_g16251_i0", "PRJNA1002816", "16411", "263", "2.142105", "5.63373615", "Streptomyces sp. NBC_", "1931", "Bacteria", "Bacteria", "87", "1.64e-19", "", "NR", "WP_266814186.1", "2903864", "g16251", "i0", "48.2", "0.96958174904943", "85", "44", "97", "0", "257", "3", "9", "93", "WP_266814186.1 hypothetical protein [Streptomyces sp. NBC_01433]", "diamond", "255", "87", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Kitasatosporales", "Streptomycetaceae", "Streptomyces", "Streptomyces sp. NBC_01433"], [31583219, "PRJNA1002816_P_NODE_21076_length_233_cov_2.006250_g20916_i0", "PRJNA1002816", "21076", "233", "2.00625", "4.6745625", "Prescottella equi 1", "43767", "Bacteria", "Bacteria", "46.2", "0.00188", "", "NR", "CBH47072.1", "685727", "g20916", "i0", "39.6", "0.682403433476395", "53", "28", "68.2", "1", "163", "5", "1", "49", "CBH47072.1 putative homoserine O-succinyltransferase [Prescottella equi 103S]", "diamond", "159", "46.2", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Nocardiaceae", "Prescottella", "Prescottella equi"], [31994290, "PRJNA1002816_P_NODE_20278_length_243_cov_0.905882_g20118_i0", "PRJNA1002816", "20278", "243", "0.905882", "2.20129326", "Chloroflexota bacterium", "2026724", "Bacteria", "Bacteria", "44.3", "0.0109", "", "NR", "MBL76554.1", "2026724", "g20118", "i0", "34.9", "1.96296296296296", "63", "39", "77.8", "1", "1", "189", "106", "166", "MBL76554.1 septum formation protein Maf [Chloroflexota bacterium]", "diamond", "477", "44.3", "1", "Bacteria", null, "Bacillati", "Chloroflexota", null, null, null, null, "Chloroflexota bacterium"], [32437514, "PRJNA1002816_P_NODE_20819_length_241_cov_0.916667_g20659_i0", "PRJNA1002816", "20819", "241", "0.916667", "2.20916747", "unclassified Streptomyces", "2593676", "Bacteria", "Bacteria", "42.4", "0.00608", "", "NR", "WP_385021696.1", "2593676", "g20659", "i0", "61.5", "0.323651452282158", "26", "10", "32.4", "0", "77", "154", "1", "26", "WP_385021696.1 MULTISPECIES: hypothetical protein [unclassified Streptomyces]", "diamond", "78", "42.4", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Kitasatosporales", "Streptomycetaceae", "Streptomyces", null], [32469112, "PRJNA1002816_P_NODE_13419_length_301_cov_0.956140_g13259_i0", "PRJNA1002816", "13419", "301", "0.95614", "2.8779814", "Nodosilinea sp. PGN35", "3020489", "Bacteria", "Bacteria", "71.6", "4.88e-12", "", "NR", "WP_275334669.1", "3020489", "g13259", "i0", "56", "0.498338870431894", "50", "22", "49.8", "0", "164", "15", "365", "414", "WP_275334669.1 hypothetical protein [Nodosilinea sp. PGN35]", "diamond", "150", "71.6", "1", "Bacteria", "Cyanobacteriota/Melainabacteria group", "Bacillati", "Cyanobacteriota", "Cyanophyceae", "Nodosilineales", "Nodosilineaceae", "Nodosilinea", "Nodosilinea sp. PGN35"]], "truncated": false, "filtered_table_rows_count": 22, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_kingdom\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA1002816", "p1": "Bacillati"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1002816&tax_kingdom=Bacillati", "results": [{"value": "PRJNA1002816", "label": "PRJNA1002816", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_kingdom=Bacillati", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1002816&tax_kingdom=Bacillati", "results": [{"value": "diamond", "label": "diamond", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1002816&tax_kingdom=Bacillati&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1002816&tax_kingdom=Bacillati&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1002816&tax_kingdom=Bacillati", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1002816&tax_kingdom=Bacillati&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1002816&tax_kingdom=Bacillati", "results": [{"value": "Cyanobacteriota/Melainabacteria group", "label": "Cyanobacteriota/Melainabacteria group", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1002816&tax_kingdom=Bacillati&tax_clade=Cyanobacteriota%2FMelainabacteria+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1002816&tax_kingdom=Bacillati", "results": [{"value": "Bacillati", "label": "Bacillati", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1002816", "selected": true}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1002816&tax_kingdom=Bacillati", "results": [{"value": "Actinomycetota", "label": "Actinomycetota", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1002816&tax_kingdom=Bacillati&tax_phylum=Actinomycetota", "selected": false}, {"value": "Bacillota", "label": "Bacillota", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1002816&tax_kingdom=Bacillati&tax_phylum=Bacillota", "selected": false}, {"value": "Cyanobacteriota", "label": "Cyanobacteriota", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1002816&tax_kingdom=Bacillati&tax_phylum=Cyanobacteriota", "selected": false}, {"value": "Chloroflexota", "label": "Chloroflexota", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1002816&tax_kingdom=Bacillati&tax_phylum=Chloroflexota", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 308.1736429994635}