{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA1000943\", tax_clade = \"Amoebozoa\" and tax_phylum = \"Tubulinea\"", "rows": [[3971488, "PRJNA1000943_P_NODE_7524_length_300_cov_1.325991_g7386_i0", "PRJNA1000943", "7524", "300", "1.325991", "3.977973", "Vermamoeba vermiformis", "5778", "Tubulinea", "other_Eukaryota", "486", "6.459999999999999e-133", "", "NTclustered", "gi|421976355|gb|JQ519494.1|", "5778", "g7386", "i0", "95.987", "0.996666666666667", "299", "12", "99", "0", "2", "300", "517", "219", "Vermamoeba vermiformis clone JG10.150_g4 elongation factor 2 alpha gene, partial cds", "blastn", "299", "486", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"], [5247851, "PRJNA1000943_P_NODE_10305_length_261_cov_1.425532_g10167_i0", "PRJNA1000943", "10305", "261", "1.425532", "3.72063852", "Vermamoeba vermiformis", "5778", "Tubulinea", "other_Eukaryota", "213", "1.03e-50", "", "NTclustered", "gi|61968712|gb|AY803788.1|", "5778", "g10167", "i0", "87.302", "2.17241379310345", "189", "21", "72", "2", "73", "261", "927", "742", "Hartmannella vermiformis vacuolar protein sorting protein 35-3 (VPS35-3) gene, partial cds", "blastn", "567", "213", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"], [5247987, "PRJNA1000943_P_NODE_7365_length_302_cov_4.244541_g7227_i0", "PRJNA1000943", "7365", "302", "4.244541", "12.81851382", "Vermamoeba vermiformis", "5778", "Tubulinea", "other_Eukaryota", "531", "2.9599999999999993e-146", "", "NTclustered", "gi|909719645|gb|KT185625.1|", "5778", "g7227", "i0", "98.344", "20.450331125827802", "302", "5", "100", "0", "1", "302", "7085", "6784", "Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence", "blastn", "6176", "531", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"], [7797635, "PRJNA1000943_P_NODE_15707_length_238_cov_2.387879_g15569_i0", "PRJNA1000943", "15707", "238", "2.387879", "5.68315202", "Saccamoeba lacustris", "704142", "Tubulinea", "other_Eukaryota", "120", "2.66e-31", "", "NR", "AFX84551.1", "704142", "g15569", "i0", "67.9", "0.983193277310924", "78", "25", "98.3", "0", "236", "3", "156", "233", "AFX84551.1 alpha tubulin, partial [Saccamoeba lacustris]", "diamond", "234", "120", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Elardia", "Euamoebida", "Hartmannellidae", "Saccamoeba", "Saccamoeba lacustris"], [10348247, "PRJNA1000943_P_NODE_15169_length_243_cov_0.917647_g15031_i0", "PRJNA1000943", "15169", "243", "0.917647", "2.22988221", "Vermamoeba vermiformis", "5778", "Tubulinea", "other_Eukaryota", "377", "3.18e-100", "", "NTclustered", "gi|423292048|gb|JQ519470.1|", "5778", "g15031", "i0", "94.65", "79.1028806584362", "243", "13", "100", "0", "1", "243", "153", "395", "Vermamoeba vermiformis clone JG10.132_b5 alpha tubulin gene, partial cds", "blastn", "19222", "377", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"], [10348307, "PRJNA1000943_P_NODE_5769_length_334_cov_2.835249_g5631_i0", "PRJNA1000943", "5769", "334", "2.835249", "9.46973166", "Vermamoeba vermiformis", "5778", "Tubulinea", "other_Eukaryota", "573", "5.43e-159", "", "NTclustered", "gi|300078496|gb|GU001158.1|", "5778", "g5631", "i0", "97.605", "13.7784431137725", "334", "8", "100", "0", "1", "334", "1631", "1298", "Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence", "blastn", "4602", "573", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"], [13752682, "PRJNA1000943_P_NODE_1011_length_741_cov_4.384731_g885_i0", "PRJNA1000943", "1011", "741", "4.384731", "32.49085671", "Vermamoeba", "1260114", "Tubulinea", "other_Eukaryota", "1321", "0", "", "NTclustered", "gi|909719645|gb|KT185625.1|", "5778", "g885", "i0", "98.919", "95.9217273954116", "740", "7", "99", "1", "1", "739", "4889", "5628", "Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence", "blastn", "71078", "1321", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"], [17996833, "PRJNA1000943_P_NODE_155_length_1519_cov_5.450899_g125_i0", "PRJNA1000943", "155", "1519", "5.450899", "82.79915581", "Copromyxa protea", "931554", "Tubulinea", "other_Eukaryota", "771", "6.69e-278", "", "NR", "BAN33737.1", "931554", "g125", "i0", "81.7", "3.63001974983542", "464", "79", "90.5", "1", "1516", "143", "1", "464", "BAN33737.1 elongation factor-like protein [Copromyxa protea]", "diamond", "5514", "771", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Elardia", "Euamoebida", "Hartmannellidae", "Copromyxa", "Copromyxa protea"], [17996872, "PRJNA1000943_P_NODE_5495_length_342_cov_1.148699_g5357_i0", "PRJNA1000943", "5495", "342", "1.148699", "3.92855058", "Vermamoeba vermiformis", "5778", "Tubulinea", "other_Eukaryota", "472", "2.09e-128", "", "NTclustered", "gi|89357437|gb|DQ407656.1|", "5778", "g5357", "i0", "91.52", "2", "342", "29", "100", "0", "1", "342", "69", "410", "Hartmannella vermiformis chitinase-like protein cluster A mRNA, partial cds", "blastn", "684", "472", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"], [20125803, "PRJNA1000943_P_NODE_6836_length_311_cov_3.441176_g6698_i0", "PRJNA1000943", "6836", "311", "3.441176", "10.70205736", "Eukaryota", "2759", "unresolved_Eukaryota", "other_Eukaryota", "558", "1.3999999999999997e-154", "", "NTclustered", "gi|909719645|gb|KT185625.1|", "5778", "g6698", "i0", "99.035", "58.7942122186495", "311", "3", "100", "0", "1", "311", "3879", "3569", "Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence", "blastn", "18285", "558", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"], [21821957, "PRJNA1000943_P_NODE_13558_length_246_cov_2.763006_g13420_i0", "PRJNA1000943", "13558", "246", "2.763006", "6.79699476", "Vermamoeba vermiformis", "5778", "Tubulinea", "other_Eukaryota", "377", "3.2300000000000003e-100", "", "NTclustered", "gi|62910949|gb|AY925001.1|", "5778", "g13420", "i0", "94.309", "7.36178861788618", "246", "14", "100", "0", "1", "246", "394", "639", "Hartmannella vermiformis Rpl7A mRNA, partial cds", "blastn", "1811", "377", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"], [23097355, "PRJNA1000943_P_NODE_6599_length_316_cov_5.687243_g6461_i0", "PRJNA1000943", "6599", "316", "5.687243", "17.97168788", "Vermamoeba vermiformis", "5778", "Tubulinea", "other_Eukaryota", "579", "1.0999999999999999e-160", "", "NTclustered", "gi|300078496|gb|GU001158.1|", "5778", "g6461", "i0", "99.684", "47.7721518987342", "316", "1", "100", "0", "1", "316", "3436", "3751", "Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence", "blastn", "15096", "579", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"], [24371056, "PRJNA1000943_P_NODE_5280_length_348_cov_1.181818_g5142_i0", "PRJNA1000943", "5280", "348", "1.181818", "4.11272664", "Vermamoeba vermiformis", "5778", "Tubulinea", "other_Eukaryota", "505", "2.1e-138", "", "NTclustered", "gi|146335208|gb|EF216680.1|", "5778", "g5142", "i0", "92.816", "1.19827586206897", "348", "25", "100", "0", "1", "348", "1138", "1485", "Hartmannella vermiformis transketolase mRNA, complete cds", "blastn", "417", "505", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"], [29079767, "PRJNA1000943_P_NODE_3308_length_426_cov_1.014164_g3171_i0", "PRJNA1000943", "3308", "426", "1.014164", "4.32033864", "Eukaryota", "2759", "unresolved_Eukaryota", "other_Eukaryota", "105", "2.21e-24", "", "NR", "BAF75060.1", "5775", "g3171", "i0", "52", "1.50704225352113", "102", "48", "71.1", "1", "124", "426", "43", "144", "BAF75060.1 aquaporin [Amoeba proteus]", "diamond", "642", "105", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Elardia", "Euamoebida", "Amoebidae", "Amoeba", "Amoeba proteus"], [30887465, "PRJNA1000943_P_NODE_8014_length_291_cov_2.862385_g7876_i0", "PRJNA1000943", "8014", "291", "2.862385", "8.32954035", "Amoeba proteus", "5775", "Tubulinea", "other_Eukaryota", "124", "2.07e-31", "", "NR", "AAD37351.1", "5775", "g7876", "i0", "65.7", "1.93814432989691", "99", "30", "97.9", "2", "291", "7", "112", "210", "AAD37351.1 pepstatin-insensitive carboxyl proteinase 1, partial [Amoeba proteus]", "diamond", "564", "124", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Elardia", "Euamoebida", "Amoebidae", "Amoeba", "Amoeba proteus"]], "truncated": false, "filtered_table_rows_count": 15, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA1000943", "p1": "Amoebozoa", "p2": "Tubulinea"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1000943&tax_clade=Amoebozoa&tax_phylum=Tubulinea", "results": [{"value": "PRJNA1000943", "label": "PRJNA1000943", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=Amoebozoa&tax_phylum=Tubulinea", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1000943&tax_clade=Amoebozoa&tax_phylum=Tubulinea", "results": [{"value": "blastn", "label": "blastn", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1000943&tax_clade=Amoebozoa&tax_phylum=Tubulinea&analysis=blastn", "selected": false}, {"value": "diamond", "label": "diamond", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1000943&tax_clade=Amoebozoa&tax_phylum=Tubulinea&analysis=diamond", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1000943&tax_clade=Amoebozoa&tax_phylum=Tubulinea", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1000943&tax_clade=Amoebozoa&tax_phylum=Tubulinea&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1000943&tax_clade=Amoebozoa&tax_phylum=Tubulinea", "results": [{"value": "Amoebozoa", "label": "Amoebozoa", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1000943&tax_phylum=Tubulinea", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1000943&tax_clade=Amoebozoa&tax_phylum=Tubulinea", "results": [], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA1000943&tax_clade=Amoebozoa&tax_phylum=Tubulinea", "results": [{"value": "Tubulinea", "label": "Tubulinea", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1000943&tax_clade=Amoebozoa", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 196.62031800544355}