{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJEB9859\" and tax_phylum = \"Campylobacterota\"", "rows": [[1419616, "PRJEB9859_P_NODE_2402_length_302_cov_1.772894_g2367_i0", "PRJEB9859", "2402", "302", "1.772894", "5.35413988", "Nautilia sp. PV-1", "2579250", "Bacteria", "Bacteria", "65.8", "3.61e-6", "", "NTclustered", "gi|1551374994|gb|CP026530.1|", "2579250", "g2367", "i0", "86.441", "0.486754966887417", "59", "8", "20", "0", "100", "158", "1605391", "1605449", "Nautilia sp. PV-1 chromosome, complete genome", "blastn", "147", "65.8", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Nautiliales", "Nautiliaceae", "Nautilia", "Nautilia sp. PV-1"], [1419642, "PRJEB9859_P_NODE_3642_length_263_cov_3.555556_g3607_i0", "PRJEB9859", "3642", "263", "3.555556", "9.35111228", "Campylobacter sp. 19-13652", "2840180", "Bacteria", "Bacteria", "65.8", "3.08e-6", "", "NTclustered", "gi|2052158881|dbj|AP024713.1|", "2840180", "g3607", "i0", "82.667", "0.855513307984791", "75", "11", "28", "2", "27", "99", "1151708", "1151782", "Campylobacter sp. 19-13652 DNA, complete genome", "blastn", "225", "65.8", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter sp. 19-13652"], [15026857, "PRJEB9859_P_NODE_2972_length_282_cov_11246.612648_g2937_i0", "PRJEB9859", "2972", "282", "11246.612648", "31715.44766736", "root", "1", "Root_unresolved", "Root_unresolved", "69.4", "2.58e-7", "", "NTclustered", "gi|2222028449|gb|CP094103.1|", "210", "g2937", "i0", "100", "14.709219858156", "37", "0", "13", "0", "173", "209", "1292615", "1292579", "Helicobacter pylori strain Hpfe077 chromosome, complete genome", "blastn", "4148", "69.4", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [28424118, "PRJEB9859_P_NODE_4266_length_251_cov_1.000000_g4231_i0", "PRJEB9859", "4266", "251", "1", "2.51", "Campylobacterota bacterium", "2026809", "Bacteria", "Bacteria", "70.5", "6.96e-12", "", "NR", "RLA72306.1", "2026809", "g4231", "i0", "52.8", "0.860557768924303", "72", "31", "83.7", "2", "249", "40", "6", "76", "RLA72306.1 MAG: N-6 DNA methylase [Campylobacterota bacterium]", "diamond", "216", "70.5", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", null, null, null, null, "Campylobacterota bacterium"], [29654956, "PRJEB9859_P_NODE_2710_length_291_cov_1.900763_g2675_i0", "PRJEB9859", "2710", "291", "1.900763", "5.53122033", "Nitratiruptor tergarcus", "269259", "Bacteria", "Bacteria", "53.9", "7.94e-6", "", "NR", "WP_084274523.1", "269259", "g2675", "i0", "67.4", "0.443298969072165", "43", "14", "44.3", "0", "271", "143", "275", "317", "WP_084274523.1 RCC1 domain-containing protein [Nitratiruptor tergarcus]", "diamond", "129", "53.9", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Nautiliales", "Nitratiruptoraceae", "Nitratiruptor", "Nitratiruptor tergarcus"], [30319274, "PRJEB9859_P_NODE_5232_length_244_cov_1.032558_g5197_i0", "PRJEB9859", "5232", "244", "1.032558", "2.51944152", "Arcobacter sp.", "1872629", "Bacteria", "Bacteria", "45.8", "0.00152", "", "NR", "PLY05996.1", "1872629", "g5197", "i0", "46.7", "0.55327868852459", "45", "24", "55.3", "0", "3", "137", "117", "161", "PLY05996.1 MAG: nucleoside 2-deoxyribosyltransferase [Arcobacter sp.]", "diamond", "135", "45.8", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Arcobacteraceae", "Arcobacter", "Arcobacter sp."]], "truncated": false, "filtered_table_rows_count": 6, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_phylum\" = :p1 order by rowid limit 101", "params": {"p0": "PRJEB9859", "p1": "Campylobacterota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB9859&tax_phylum=Campylobacterota", "results": [{"value": "PRJEB9859", "label": "PRJEB9859", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB9859&tax_phylum=Campylobacterota", "results": [{"value": "blastn", "label": "blastn", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB9859&tax_phylum=Campylobacterota&analysis=blastn", "selected": false}, {"value": "diamond", "label": "diamond", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB9859&tax_phylum=Campylobacterota&analysis=diamond", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB9859&tax_phylum=Campylobacterota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB9859&tax_phylum=Campylobacterota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB9859&tax_phylum=Campylobacterota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB9859&tax_phylum=Campylobacterota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB9859&tax_phylum=Campylobacterota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB9859&tax_phylum=Campylobacterota", "results": [{"value": "Campylobacterota", "label": "Campylobacterota", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB9859", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 321.34433300007004}