{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJEB81463\" and tax_phylum = \"Gemmatimonadota\"", "rows": [[1415085, "PRJEB81463_P_NODE_21502_length_251_cov_0.876404_g21230_i0", "PRJEB81463", "21502", "251", "0.876404", "2.19977404", "Gemmatimonadales bacterium", "2448054", "Bacteria", "Bacteria", "164", "3.21e-47", "", "NR", "HET9386643.1", "2448054", "g21230", "i0", "92.8", "0.99203187250996006", "83", "6", "99.2", "0", "249", "1", "215", "297", "HET9386643.1 epoxide hydrolase [Gemmatimonadales bacterium]", "diamond", "249", "164", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "Gemmatimonadales bacterium"], [5243251, "PRJEB81463_P_NODE_3965_length_505_cov_1.530093_g3694_i0", "PRJEB81463", "3965", "505", "1.530093", "7.72696965", "uncultured Gemmatimonadales bacterium", "412054", "Bacteria", "Bacteria", "568", "3.9699999999999985e-157", "", "NTclustered", "gi|2874253789|emb|OY969773.1|", "412054", "g3694", "i0", "87.008", "91.4495049504951", "508", "60", "100", "6", "1", "505", "421491", "420987", "MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1", "blastn", "46182", "568", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "uncultured Gemmatimonadales bacterium"], [17991921, "PRJEB81463_P_NODE_16215_length_271_cov_1.217172_g15943_i0", "PRJEB81463", "16215", "271", "1.217172", "3.29853612", "Gemmatimonadota bacterium", "2026742", "Bacteria", "Bacteria", "174", "9.28e-49", "", "NR", "MES3034284.1", "2026742", "g15943", "i0", "98.9", "3.98523985239852", "90", "1", "99.6", "0", "2", "271", "449", "538", "MES3034284.1 Tex family protein [Gemmatimonadota bacterium]", "diamond", "1080", "174", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadota bacterium"], [18849141, "PRJEB81463_P_NODE_9015_length_335_cov_1.786260_g8743_i0", "PRJEB81463", "9015", "335", "1.78626", "5.983971", "Gemmatirosa", "1706036", "Bacteria", "Bacteria", "497", "3.3799999999999998e-136", "", "NTclustered", "gi|2874253789|emb|OY969773.1|", "412054", "g8743", "i0", "93.694", "130.185074626866", "333", "19", "100", "2", "1", "332", "422772", "423103", "MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1", "blastn", "43612", "499", "0.995991983967936", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "uncultured Gemmatimonadales bacterium"], [20541351, "PRJEB81463_P_NODE_17357_length_265_cov_1.625000_g17085_i0", "PRJEB81463", "17357", "265", "1.625", "4.30625", "Gemmatimonas sp.", "1962908", "Bacteria", "Bacteria", "125", "2.69e-33", "", "NR", "HYW30994.1", "1962908", "g17085", "i0", "87.1", "0.792452830188679", "70", "9", "79.2", "0", "265", "56", "179", "248", "HYW30994.1 TerC family protein [Gemmatimonas sp.]", "diamond", "210", "125", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatimonas", "Gemmatimonas sp."], [27343306, "PRJEB81463_P_NODE_28383_length_242_cov_0.923077_g28111_i0", "PRJEB81463", "28383", "242", "0.923077", "2.23384634", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "131", "1.58e-33", "", "NR", "HEV8445199.1", "2026741", "g28111", "i0", "75", "12.8925619834711", "80", "20", "99.2", "0", "241", "2", "233", "312", "HEV8445199.1 aminomethyl-transferring glycine dehydrogenase [Gemmatimonadaceae bacterium]", "diamond", "3120", "131", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", null, "Gemmatimonadaceae bacterium"], [27382063, "PRJEB81463_P_NODE_12063_length_293_cov_2.522727_g11791_i0", "PRJEB81463", "12063", "293", "2.522727", "7.39159011", "Longimicrobium sp.", "2029185", "Bacteria", "Bacteria", "43.1", "0.0446", "", "NR", "HEU4884980.1", "2029185", "g11791", "i0", "31.5", "0.9419795221843", "92", "58", "89.1", "1", "277", "17", "179", "270", "HEU4884980.1 helix-turn-helix domain-containing protein [Longimicrobium sp.]", "diamond", "276", "43.1", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Longimicrobiia", "Longimicrobiales", "Longimicrobiaceae", "Longimicrobium", "Longimicrobium sp."], [27918644, "PRJEB81463_P_NODE_18525_length_260_cov_1.390374_g18253_i0", "PRJEB81463", "18525", "260", "1.390374", "3.6149724", "Gemmatimonadota bacterium", "2026742", "Bacteria", "Bacteria", "156", "2.14e-44", "", "NR", "MES3033435.1", "2026742", "g18253", "i0", "94.2", "0.992307692307692", "86", "5", "99.2", "0", "1", "258", "78", "163", "MES3033435.1 adenosine deaminase [Gemmatimonadota bacterium]", "diamond", "258", "156", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadota bacterium"], [28424058, "PRJEB81463_P_NODE_22146_length_250_cov_0.881356_g21874_i0", "PRJEB81463", "22146", "250", "0.881356", "2.20339", "Gemmatimonadales bacterium", "2448054", "Bacteria", "Bacteria", "112", "3.81e-27", "", "NR", "MFI5311974.1", "2448054", "g21874", "i0", "72.6", "1.008", "84", "22", "99.6", "1", "1", "249", "268", "351", "MFI5311974.1 sigma-54-dependent transcriptional regulator [Gemmatimonadales bacterium]", "diamond", "252", "112", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "Gemmatimonadales bacterium"], [28700900, "PRJEB81463_P_NODE_24567_length_247_cov_0.896552_g24295_i0", "PRJEB81463", "24567", "247", "0.896552", "2.21448344", "Gemmatimonas", "173479", "Bacteria", "Bacteria", "124", "8.95e-31", "", "NR", "WP_012683638.1", "173480", "g24295", "i0", "76.6", "5.76923076923077", "77", "18", "93.5", "0", "231", "1", "460", "536", "WP_012683638.1 BatA domain-containing protein [Gemmatimonas aurantiaca]", "diamond", "1425", "124", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatimonas", "Gemmatimonas aurantiaca"], [28897413, "PRJEB81463_P_NODE_28388_length_242_cov_0.923077_g28116_i0", "PRJEB81463", "28388", "242", "0.923077", "2.23384634", "Gemmatimonadales bacterium", "2448054", "Bacteria", "Bacteria", "100", "2.38e-22", "", "NR", "MEO8194242.1", "2448054", "g28116", "i0", "70.4", "0.880165289256198", "71", "21", "88", "0", "25", "237", "692", "762", "MEO8194242.1 PAS domain S-box protein [Gemmatimonadales bacterium]", "diamond", "213", "100", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "Gemmatimonadales bacterium"], [29244862, "PRJEB81463_P_NODE_10109_length_317_cov_2.008197_g9837_i0", "PRJEB81463", "10109", "317", "2.008197", "6.36598449", "Gemmatimonadota bacterium", "2026742", "Bacteria", "Bacteria", "73.6", "1.29e-12", "", "NR", "MDB4884640.1", "2026742", "g9837", "i0", "40.4", "1.78864353312303", "94", "52", "87.1", "2", "27", "302", "202", "293", "MDB4884640.1 motif putative anchor domain protein [Gemmatimonadota bacterium]", "diamond", "567", "73.6", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadota bacterium"], [29276269, "PRJEB81463_P_NODE_12709_length_289_cov_1.958333_g12437_i0", "PRJEB81463", "12709", "289", "1.958333", "5.65958237", "Gemmatimonas sp.", "1962908", "Bacteria", "Bacteria", "178", "2.82e-51", "", "NR", "MEO7520649.1", "1962908", "g12437", "i0", "91.5", "0.975778546712803", "94", "8", "97.6", "0", "287", "6", "410", "503", "MEO7520649.1 sodium:solute symporter [Gemmatimonas sp.]", "diamond", "282", "178", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatimonas", "Gemmatimonas sp."], [29908103, "PRJEB81463_P_NODE_28111_length_242_cov_0.923077_g27839_i0", "PRJEB81463", "28111", "242", "0.923077", "2.23384634", "Gemmatimonadota bacterium", "2026742", "Bacteria", "Bacteria", "83.2", "9.18e-18", "", "NR", "MEN9507746.1", "2026742", "g27839", "i0", "57.5", "0.90495867768595", "73", "31", "90.5", "0", "4", "222", "107", "179", "MEN9507746.1 hypothetical protein [Gemmatimonadota bacterium]", "diamond", "219", "83.2", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadota bacterium"], [30280163, "PRJEB81463_P_NODE_22452_length_250_cov_0.881356_g22180_i0", "PRJEB81463", "22452", "250", "0.881356", "2.20339", "Gemmatimonas", "173479", "Bacteria", "Bacteria", "118", "9.589999999999999e-30", "", "NR", "WP_396224700.1", "1962908", "g22180", "i0", "80.5", "2.916", "82", "16", "98.4", "0", "247", "2", "141", "222", "WP_396224700.1 GGDEF domain-containing protein [Gemmatimonas sp.]", "diamond", "729", "119", "0.991596638655462", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatimonas", "Gemmatimonas sp."], [30792544, "PRJEB81463_P_NODE_8014_length_355_cov_1.017730_g7742_i0", "PRJEB81463", "8014", "355", "1.01773", "3.6129415", "Gemmatimonadota bacterium", "2026742", "Bacteria", "Bacteria", "145", "8.1e-38", "", "NR", "NNE08319.1", "2026742", "g7742", "i0", "54.3", "0.980281690140845", "116", "51", "98", "1", "6", "353", "207", "320", "NNE08319.1 T9SS type A sorting domain-containing protein [Gemmatimonadota bacterium]", "diamond", "348", "145", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadota bacterium"], [30887382, "PRJEB81463_P_NODE_25694_length_245_cov_0.906977_g25422_i0", "PRJEB81463", "25694", "245", "0.906977", "2.22209365", "Gemmatimonadaceae bacterium", "2026741", "Bacteria", "Bacteria", "159", "4.9099999999999996e-43", "", "NR", "HVF39535.1", "2026741", "g25422", "i0", "93.8", "1.98367346938776", "81", "5", "99.2", "0", "2", "244", "545", "625", "HVF39535.1 tetratricopeptide repeat protein [Gemmatimonadaceae bacterium]", "diamond", "486", "159", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", null, "Gemmatimonadaceae bacterium"], [30982328, "PRJEB81463_P_NODE_25494_length_245_cov_2.087209_g25222_i0", "PRJEB81463", "25494", "245", "2.087209", "5.11366205", "Gemmatimonadales bacterium", "2448054", "Bacteria", "Bacteria", "50.1", "1.99e-5", "", "NR", "HEY4648782.1", "2448054", "g25222", "i0", "46.7", "0.551020408163265", "45", "24", "55.1", "0", "143", "9", "5", "49", "HEY4648782.1 response regulator [Gemmatimonadales bacterium]", "diamond", "135", "50.1", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "Gemmatimonadales bacterium"], [31645973, "PRJEB81463_P_NODE_13597_length_284_cov_2.123223_g13325_i0", "PRJEB81463", "13597", "284", "2.123223", "6.02995332", "Longimicrobium sp.", "2029185", "Bacteria", "Bacteria", "79.7", "5.75e-15", "", "NR", "WP_331127009.1", "2029185", "g13325", "i0", "50", "0.866197183098592", "82", "30", "83.5", "3", "240", "4", "110", "183", "WP_331127009.1 hypothetical protein [Longimicrobium sp.]", "diamond", "246", "79.7", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Longimicrobiia", "Longimicrobiales", "Longimicrobiaceae", "Longimicrobium", "Longimicrobium sp."], [31740883, "PRJEB81463_P_NODE_23157_length_249_cov_0.886364_g22885_i0", "PRJEB81463", "23157", "249", "0.886364", "2.20704636", "Gemmatirosa kalamazoonensis", "861299", "Bacteria", "Bacteria", "120", "1.94e-29", "", "NR", "WP_025412854.1", "861299", "g22885", "i0", "74.4", "0.987951807228916", "82", "21", "98.8", "0", "1", "246", "328", "409", "WP_025412854.1 FHA domain-containing protein [Gemmatirosa kalamazoonensis]", "diamond", "246", "120", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatirosa", "Gemmatirosa kalamazoonensis"], [32461512, "PRJEB81463_P_NODE_20979_length_252_cov_0.871508_g20707_i0", "PRJEB81463", "20979", "252", "0.871508", "2.19620016", "Bacteria", "2", "Bacteria", "Bacteria", "64.3", "1.07e-9", "", "NR", "MFC1540090.1", "2026742", "g20707", "i0", "47.8", "5.02380952380952", "69", "33", "78.6", "1", "10", "207", "107", "175", "MFC1540090.1 tetratricopeptide repeat protein [Gemmatimonadota bacterium]", "diamond", "1266", "64.3", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadota bacterium"], [32745388, "PRJEB81463_P_NODE_20820_length_252_cov_0.871508_g20548_i0", "PRJEB81463", "20820", "252", "0.871508", "2.19620016", "Bacteria", "2", "Bacteria", "Bacteria", "73.9", "4.25e-13", "", "NR", "MBX9929902.1", "2026741", "g20548", "i0", "53.3", "9.73809523809524", "75", "34", "89.3", "1", "251", "27", "763", "836", "MBX9929902.1 serine/threonine-protein kinase [Gemmatimonadaceae bacterium]", "diamond", "2454", "73.9", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", null, "Gemmatimonadaceae bacterium"]], "truncated": false, "filtered_table_rows_count": 22, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_phylum\" = :p1 order by rowid limit 101", "params": {"p0": "PRJEB81463", "p1": "Gemmatimonadota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB81463&tax_phylum=Gemmatimonadota", "results": [{"value": "PRJEB81463", "label": "PRJEB81463", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_phylum=Gemmatimonadota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB81463&tax_phylum=Gemmatimonadota", "results": [{"value": "diamond", "label": "diamond", "count": 20, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB81463&tax_phylum=Gemmatimonadota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB81463&tax_phylum=Gemmatimonadota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB81463&tax_phylum=Gemmatimonadota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB81463&tax_phylum=Gemmatimonadota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB81463&tax_phylum=Gemmatimonadota", "results": [{"value": "FCB group", "label": "FCB group", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB81463&tax_phylum=Gemmatimonadota&tax_clade=FCB+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB81463&tax_phylum=Gemmatimonadota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB81463&tax_phylum=Gemmatimonadota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB81463&tax_phylum=Gemmatimonadota", "results": [{"value": "Gemmatimonadota", "label": "Gemmatimonadota", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB81463", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 164.39406800054712}