{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJEB7614\" and tax_kingdom = \"Pararnavirae\"", "rows": [[138650, "PRJEB7614_P_NODE_4661_length_195_cov_4.253012_g4594_i0", "PRJEB7614", "4661", "195", "4.253012", "8.2933734", "Lentivirus humimdef1", "3418650", "Viruses", "Viruses", "300", "5.4500000000000004e-77", "", "NTclustered", "gi|14039091|gb|AF219268.1|AF219268", "11676", "g4594", "i0", "94.416", "100.302564102564", "197", "8", "99", "3", "1", "194", "1711", "1515", "HIV-1 isolate FIN9257 from Finland vpu protein (vpu) and envelope glycoprotein (env) genes, complete cds; and nef protein (nef) gene, partial cds", "blastn", "19559", "300", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [138651, "PRJEB7614_P_NODE_5561_length_183_cov_1.396104_g5494_i0", "PRJEB7614", "5561", "183", "1.396104", "2.55487032", "Lentivirus humimdef1", "3418650", "Viruses", "Viruses", "278", "2.36e-70", "", "NTclustered", "gi|1625847803|gb|MK384855.1|", "11676", "g5494", "i0", "93.989", "100.109289617486", "183", "11", "100", "0", "1", "183", "2963", "3145", "HIV-1 isolate 373Pt3-2001-P13G9 from USA defective genome", "blastn", "18320", "278", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [1413336, "PRJEB7614_P_NODE_382_length_412_cov_10.467363_g327_i0", "PRJEB7614", "382", "412", "10.467363", "43.12553556", "Lentivirus humimdef1", "3418650", "Viruses", "Viruses", "497", "4.23e-136", "", "NTclustered", "gi|542125849|gb|KC863138.1|", "11676", "g327", "i0", "92.507", "84.6650485436893", "347", "26", "84", "0", "66", "412", "1571", "1225", "HIV-1 isolate C059-3A11 from Malawi envelope glycoprotein (env) gene, complete cds; and vpu protein (vpu), rev protein (rev), and tat protein (tat) genes, partial cds", "blastn", "34882", "497", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [3964854, "PRJEB7614_P_NODE_9444_length_156_cov_3.055118_g9377_i0", "PRJEB7614", "9444", "156", "3.0551179999999998", "4.76598408", "Lentivirus humimdef1", "3418650", "Viruses", "Viruses", "261", "1.96e-65", "", "NTclustered", "gi|334264977|gb|JF910214.1|", "11676", "g9377", "i0", "96.795", "91.8012820512821", "156", "5", "100", "0", "1", "156", "339", "184", "HIV-1 isolate P034.8.H3 from Netherlands envelope glycoprotein (env), rev protein (rev), and tat protein (tat) genes, partial cds", "blastn", "14321", "261", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [5241290, "PRJEB7614_P_NODE_10365_length_153_cov_2.362903_g10298_i0", "PRJEB7614", "10365", "153", "2.362903", "3.61524159", "Lentivirus humimdef1", "3418650", "Viruses", "Viruses", "250", "4.14e-62", "", "NTclustered", "gi|87246166|gb|DQ372412.1|", "11676", "g10298", "i0", "96.667", "97.7385620915033", "150", "5", "98", "0", "1", "150", "1591", "1442", "HIV-1 isolate WC37P-0696-1 from USA pol protein (pol) gene, partial cds", "blastn", "14954", "250", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [9065984, "PRJEB7614_P_NODE_5248_length_187_cov_2.240506_g5181_i0", "PRJEB7614", "5248", "187", "2.240506", "4.18974622", "Lentivirus humimdef1", "3418650", "Viruses", "Viruses", "263", "6.79e-66", "", "NTclustered", "gi|80974560|gb|DQ199156.1|", "11676", "g5181", "i0", "91.979", "100.700534759358", "187", "15", "100", "0", "1", "187", "637", "451", "HIV-1 isolate TZB0590 from Tanzania envelope glycoprotein (env) gene, partial cds", "blastn", "18831", "263", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [9065985, "PRJEB7614_P_NODE_6668_length_171_cov_2.521127_g6601_i0", "PRJEB7614", "6668", "171", "2.521127", "4.31112717", "Lentivirus humimdef1", "3418650", "Viruses", "Viruses", "222", "1.03e-53", "", "NTclustered", "gi|2687626209|gb|PP337234.1|", "11676", "g6601", "i0", "90.058", "100.567251461988", "171", "17", "100", "0", "1", "171", "1476", "1306", "HIV-1 isolate D16916.30m.2D4 from Netherlands envelope glycoprotein (env) gene, complete cds; and vpu protein (vpu), rev protein (rev), and tat protein (tat) genes, partial cds", "blastn", "17197", "222", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [10341736, "PRJEB7614_P_NODE_749_length_350_cov_15.682243_g686_i0", "PRJEB7614", "749", "350", "15.682243", "54.8878505", "Lentivirus humimdef1", "3418650", "Viruses", "Viruses", "617", "2.6e-172", "", "NTclustered", "gi|60652132|gb|AY835781.1|", "11676", "g686", "i0", "98.567", "99.7171428571429", "349", "5", "99", "0", "1", "349", "1783", "1435", "HIV-1 isolate 5157-83 clone pbf9 from USA, complete genome", "blastn", "34901", "617", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [12892189, "PRJEB7614_P_NODE_791_length_346_cov_1.403785_g728_i0", "PRJEB7614", "791", "346", "1.403785", "4.8570961", "Lentivirus humimdef1", "3418650", "Viruses", "Viruses", "606", "5.57e-169", "", "NTclustered", "gi|766625800|gb|KJ704789.1|", "11676", "g728", "i0", "98.266", "100", "346", "6", "100", "0", "1", "346", "3044", "3389", "HIV-1 isolate NYC12 from USA, partial genome", "blastn", "34600", "606", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [14167070, "PRJEB7614_P_NODE_4812_length_193_cov_2.682927_g4745_i0", "PRJEB7614", "4812", "193", "2.682927", "5.17804911", "Lentivirus humimdef1", "3418650", "Viruses", "Viruses", "270", "4.22e-68", "", "NTclustered", "gi|542126164|gb|KC863201.1|", "11676", "g4745", "i0", "91.837", "102.113989637306", "196", "13", "100", "2", "1", "193", "1255", "1450", "HIV-1 isolate C.ZA.01.Du114-A10 from South Africa envelope glycoprotein (env) gene, complete cds; vpu protein (vpu) and rev protein (rev) genes, partial cds; and nonfunctional tat protein (tat) gene, partial sequence", "blastn", "19708", "270", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [16715383, "PRJEB7614_P_NODE_34_length_839_cov_4.979012_g20_i0", "PRJEB7614", "34", "839", "4.979012", "41.77391068", "Lentivirus humimdef1", "3418650", "Viruses", "Viruses", "1229", "0", "", "NTclustered", "gi|90993399|gb|DQ410256.1|", "11676", "g20", "i0", "93.214", "99.6603098927294", "840", "49", "100", "5", "1", "839", "574", "1406", "HIV-1 isolate H22v1ed3.2 from USA envelope glycoprotein (env) gene, complete cds", "blastn", "83615", "1229", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [16715387, "PRJEB7614_P_NODE_4814_length_193_cov_2.609756_g4747_i0", "PRJEB7614", "4814", "193", "2.609756", "5.03682908", "Lentivirus humimdef1", "3418650", "Viruses", "Viruses", "320", "4.13e-83", "", "NTclustered", "gi|256252402|dbj|AB485641.1|", "11676", "g4747", "i0", "96.429", "101.507772020725", "196", "4", "100", "1", "1", "193", "6556", "6361", "Human immunodeficiency virus 1 proviral DNA, complete genome, clone: pPRD320-06B02", "blastn", "19591", "320", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [17990210, "PRJEB7614_P_NODE_1755_length_273_cov_17.352459_g1688_i0", "PRJEB7614", "1755", "273", "17.352459", "47.37221307", "Lentivirus humimdef1", "3418650", "Viruses", "Viruses", "477", "3.489999999999999e-130", "", "NTclustered", "gi|62637563|gb|AY781126.1|", "11676", "g1688", "i0", "98.519", "98.5934065934066", "270", "4", "99", "0", "1", "270", "642", "911", "HIV-1 isolate 01UYTRA1092 from Uruguay, complete genome", "blastn", "26916", "477", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [17990219, "PRJEB7614_P_NODE_7475_length_165_cov_3.735294_g7408_i0", "PRJEB7614", "7475", "165", "3.735294", "6.1632351", "Lentivirus humimdef1", "3418650", "Viruses", "Viruses", "219", "1.29e-52", "", "NTclustered", "gi|296933105|gb|HM014322.1|", "11676", "g7408", "i0", "90.533", "102.078787878788", "169", "11", "100", "4", "1", "165", "1379", "1212", "HIV-1 isolate NA20_LN8 from United Kingdom envelope glycoprotein (env) gene, partial cds", "blastn", "16843", "219", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [24364515, "PRJEB7614_P_NODE_2540_length_242_cov_2.164319_g2473_i0", "PRJEB7614", "2540", "242", "2.164319", "5.23765198", "Lentivirus humimdef1", "3418650", "Viruses", "Viruses", "255", "1.55e-63", "", "NTclustered", "gi|2274428698|gb|ON891032.1|", "11676", "g2473", "i0", "85.83", "101.388429752066", "247", "28", "100", "6", "1", "242", "1621", "1377", "HIV-1 isolate V703_1407_090_RE_pblib003_s from South Africa nonfunctional rev protein (rev) gene, partial sequence; tat protein (tat) gene, partial cds; and vpu protein (vpu) and envelope glycoprotein (env) genes, complete cds", "blastn", "24536", "255", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25525694, "PRJEB7614e_S_NODE_22193_length_164_cov_1.023256_g22185_i0", "PRJEB7614", "22193", "164", "1.023256", "1.67813984", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "235", "1.27e-57", "", "NTclustered", "gi|472270709|gb|KC690689.1|", "11676", "g22185", "i0", "93.125", "97.2743902439024", "160", "11", "98", "0", "1", "160", "523", "682", "HIV-1 isolate KRC306703 from South Korea envelope glycoprotein (env) gene, partial cds", "blastn", "15953", "235", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25661670, "PRJEB7614e_S_NODE_1250_length_224_cov_5.693122_g1242_i0", "PRJEB7614", "1250", "224", "5.693122", "12.75259328", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "318", "1.78e-82", "", "NTclustered", "gi|914330336|gb|KT276259.1|", "11676", "g1242", "i0", "92.377", "100.678571428571", "223", "17", "99", "0", "1", "223", "7089", "6867", "HIV-1 isolate ARP1199 from Spain gag protein (gag) gene, complete cds; pol protein (pol) gene, partial cds; and vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds", "blastn", "22552", "318", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25661674, "PRJEB7614e_S_NODE_3002_length_194_cov_1.496855_g2994_i0", "PRJEB7614", "3002", "194", "1.496855", "2.9038987", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "315", "1.93e-81", "", "NTclustered", "gi|1799131850|gb|MN871234.1|", "11676", "g2994", "i0", "95.876", "100", "194", "8", "100", "0", "1", "194", "263", "70", "HIV-1 isolate CON-18-D07-1125-d-1 envelope glycoprotein (env) gene, complete cds", "blastn", "19400", "315", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25752651, "PRJEB7614b_S_NODE_258_length_322_cov_39496.411150_g256_i0", "PRJEB7614", "258", "322", "39496.41115", "127178.443903", "Viruses", "10239", "Viruses", "Viruses", "86.1", "2.98e-12", "", "NTclustered", "gi|2859928216|gb|PQ511684.1|", "11676", "g256", "i0", "100", "15.6739130434783", "46", "0", "14", "0", "277", "322", "9467", "9512", "HIV-1 isolate GB1LV100191 from USA, complete genome", "blastn", "5047", "86.1", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25752662, "PRJEB7614c_S_NODE_106_length_362_cov_2110.149847_g105_i0", "PRJEB7614", "106", "362", "2110.149847", "7638.74244614", "Viruses", "10239", "Viruses", "Viruses", "119", "3.3400000000000003e-22", "", "NTclustered", "gi|2859928216|gb|PQ511684.1|", "11676", "g105", "i0", "98.507", "19.0055248618785", "67", "1", "19", "0", "1", "67", "9533", "9467", "HIV-1 isolate GB1LV100191 from USA, complete genome", "blastn", "6880", "119", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25797748, "PRJEB7614e_S_NODE_1011_length_239_cov_5.843137_g1003_i0", "PRJEB7614", "1011", "239", "5.843137", "13.96509743", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "348", "2.4500000000000002e-91", "", "NTclustered", "gi|18075849|emb|AJ418513.1|", "11676", "g1003", "i0", "92.975", "100.581589958159", "242", "11", "100", "4", "1", "239", "1543", "1305", "Human immunodeficiency virus type 1 env gene for gp160 protein, genomic RNA, clone B-002", "blastn", "24039", "348", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25797756, "PRJEB7614e_S_NODE_2451_length_199_cov_1.365854_g2443_i0", "PRJEB7614", "2451", "199", "1.365854", "2.71804946", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "274", "3.3899999999999997e-69", "", "NTclustered", "gi|1041501072|gb|KX129460.1|", "11676", "g2443", "i0", "93.478", "88.070351758794", "184", "12", "92", "0", "16", "199", "1249", "1066", "HIV-1 isolate IC.689.0.G10 from USA envelope glycoprotein (env) gene, partial cds", "blastn", "17526", "274", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25797763, "PRJEB7614e_S_NODE_5131_length_184_cov_0.865772_g5123_i0", "PRJEB7614", "5131", "184", "0.865772", "1.59302048", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "296", "6.57e-76", "", "NTclustered", "gi|55735975|gb|AY771591.1|", "11676", "g5123", "i0", "95.652", "99.9619565217391", "184", "8", "100", "0", "1", "184", "5686", "5503", "HIV-1 isolate BREPM269 from Brazil, complete genome", "blastn", "18393", "296", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25933969, "PRJEB7614e_S_NODE_15732_length_168_cov_1.037594_g15724_i0", "PRJEB7614", "15732", "168", "1.037594", "1.74315792", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "272", "9.95e-69", "", "NTclustered", "gi|140089978|gb|EF179967.1|", "11676", "g15724", "i0", "95.833", "99.3869047619048", "168", "7", "100", "0", "1", "168", "814", "647", "HIV-1 isolate LTNP 11005 clone CL4 from France envelope glylcoprotein (env) gene, partial cds", "blastn", "16697", "272", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [26069958, "PRJEB7614e_S_NODE_1085_length_233_cov_5.535354_g1077_i0", "PRJEB7614", "1085", "233", "5.535354", "12.89737482", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "350", "6.6e-92", "", "NTclustered", "gi|2575864304|gb|OR327234.1|", "11676", "g1077", "i0", "95.045", "98.412017167382", "222", "11", "95", "0", "1", "222", "1455", "1234", "HIV-1 isolate 93CBG4-18909/14724 from South Korea envelope glycoprotein (env) and nef protein (nef) genes, complete cds", "blastn", "22930", "350", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [26069967, "PRJEB7614e_S_NODE_2445_length_199_cov_4.658537_g2437_i0", "PRJEB7614", "2445", "199", "4.658537", "9.27048863", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "300", "5.5900000000000004e-77", "", "NTclustered", "gi|45738219|gb|AY563170.1|", "11676", "g2437", "i0", "93.596", "100.633165829146", "203", "8", "100", "3", "1", "199", "6879", "6678", "HIV-1 isolate ARG4006 from Argentina gag protein (gag) and pol polyprotein (pol) genes, partial cds; and vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), env protein (env), and nef protein (nef) genes, complete cds", "blastn", "20026", "300", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [26069971, "PRJEB7614e_S_NODE_43677_length_152_cov_1.205128_g43669_i0", "PRJEB7614", "43677", "152", "1.205128", "1.83179456", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "259", "6.82e-65", "", "NTclustered", "gi|459615|emb|Z30689.1|", "11676", "g43669", "i0", "97.368", "99.9934210526316", "152", "4", "100", "0", "1", "152", "340", "189", "HIV-1 proviral vif gene DNA", "blastn", "15199", "259", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [26206246, "PRJEB7614e_S_NODE_3278_length_192_cov_1.426752_g3270_i0", "PRJEB7614", "3278", "192", "1.426752", "2.73936384", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "342", "8.759999999999999e-90", "", "NTclustered", "gi|672891704|gb|KF701940.1|", "11676", "g3270", "i0", "98.953", "99.4375", "191", "2", "99", "0", "2", "192", "1139", "949", "HIV-1 isolate gag357 from Canada gag protein gene, partial cds", "blastn", "19092", "342", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [26206255, "PRJEB7614e_S_NODE_5126_length_184_cov_2.241611_g5118_i0", "PRJEB7614", "5126", "184", "2.241611", "4.12456424", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "307", "3.0300000000000004e-79", "", "NTclustered", "gi|303291584|gb|GQ412378.1|", "11676", "g5118", "i0", "96.739", "100.005434782609", "184", "6", "100", "0", "1", "184", "224", "407", "HIV-1 isolate 5_PB_40wpi_5 envelope glycoprotein (env) gene, partial cds", "blastn", "18401", "307", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [26296602, "PRJEB7614b_S_NODE_598_length_252_cov_52965.101382_g596_i0", "PRJEB7614", "598", "252", "52965.101382", "133472.05548264", "Viruses", "10239", "Viruses", "Viruses", "104", "6.22e-18", "", "NTclustered", "gi|2859928216|gb|PQ511684.1|", "11676", "g596", "i0", "100", "23.1865079365079", "56", "0", "22", "0", "1", "56", "9522", "9467", "HIV-1 isolate GB1LV100191 from USA, complete genome", "blastn", "5843", "104", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [26342078, "PRJEB7614e_S_NODE_18615_length_166_cov_2.992366_g18607_i0", "PRJEB7614", "18615", "166", "2.992366", "4.96732756", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "237", "3.58e-58", "", "NTclustered", "gi|2105864015|gb|MZ347619.1|", "11676", "g18607", "i0", "92.771", "87.3795180722892", "166", "9", "100", "2", "1", "166", "1423", "1585", "HIV-1 strain AA086d_ENV28_172days from Thailand envelope glycoprotein (env), vpu protein (vpu), rev protein (rev), and tat protein (tat) genes, partial cds", "blastn", "14505", "237", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [26342079, "PRJEB7614e_S_NODE_22191_length_164_cov_1.387597_g22183_i0", "PRJEB7614", "22191", "164", "1.387597", "2.27565908", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "287", "3.45e-73", "", "NTclustered", "gi|16118337|gb|AY037276.1|", "11676", "g22183", "i0", "98.171", "99.6463414634146", "164", "3", "100", "0", "1", "164", "3295", "3132", "HIV-1 isolate ARMA070 from Argentina nonfunctional gag protein and nonfunctional pol protein genes, partial sequence; vif protein (vif) gene, complete cds; and nonfunctional vpr protein, nonfunctional tat protein, nonfunctional rev protein, nonfunctional vpu protein, nonfunctional envelope glycoprotein, and nonfunctional nef protein genes, complete sequence", "blastn", "16342", "287", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [26342080, "PRJEB7614e_S_NODE_2527_length_198_cov_1.398773_g2519_i0", "PRJEB7614", "2527", "198", "1.398773", "2.76957054", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "339", "1.18e-88", "", "NTclustered", "gi|662376321|gb|KF729811.1|", "11676", "g2519", "i0", "97.475", "99.959595959596", "198", "5", "100", "0", "1", "198", "1028", "1225", "HIV-1 isolate 010-00134-8_22OCT96 from USA pol protein (pol) gene, partial cds", "blastn", "19792", "339", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [26432614, "PRJEB7614a_S_NODE_73695_length_222_cov_59.566845_g72491_i0", "PRJEB7614", "73695", "222", "59.566845", "132.2383959", "root", "1", "Root_unresolved", "Root_unresolved", "99", "2.49e-16", "", "NTclustered", "gi|2859928216|gb|PQ511684.1|", "11676", "g72491", "i0", "98.214", "26.8243243243243", "56", "1", "25", "0", "1", "56", "9524", "9469", "HIV-1 isolate GB1LV100191 from USA, complete genome", "blastn", "5955", "100", "0.99", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [26432641, "PRJEB7614e_S_NODE_1663_length_211_cov_2882.176136_g1655_i0", "PRJEB7614", "1663", "211", "2882.176136", "6081.39164696", "Viruses", "10239", "Viruses", "Viruses", "71.3", "5.12e-8", "", "NTclustered", "gi|2859928216|gb|PQ511684.1|", "11676", "g1655", "i0", "100", "19.7251184834123", "38", "0", "18", "0", "174", "211", "9466", "9503", "HIV-1 isolate GB1LV100191 from USA, complete genome", "blastn", "4162", "71.3", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"]], "truncated": false, "filtered_table_rows_count": 35, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_kingdom\" = :p1 order by rowid limit 101", "params": {"p0": "PRJEB7614", "p1": "Pararnavirae"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB7614&tax_kingdom=Pararnavirae", "results": [{"value": "PRJEB7614", "label": "PRJEB7614", "count": 35, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_kingdom=Pararnavirae", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB7614&tax_kingdom=Pararnavirae", "results": [{"value": "blastn", "label": "blastn", "count": 35, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB7614&tax_kingdom=Pararnavirae&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB7614&tax_kingdom=Pararnavirae", "results": [{"value": "Viruses", "label": "Viruses", "count": 35, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB7614&tax_kingdom=Pararnavirae&tax_superkingdom=Viruses", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB7614&tax_kingdom=Pararnavirae", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB7614&tax_kingdom=Pararnavirae", "results": [{"value": "Pararnavirae", "label": "Pararnavirae", "count": 35, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB7614", "selected": true}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB7614&tax_kingdom=Pararnavirae", "results": [{"value": "Artverviricota", "label": "Artverviricota", "count": 35, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB7614&tax_kingdom=Pararnavirae&tax_phylum=Artverviricota", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 153.65372900123475}