{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJEB7366\", tax_clade = \"PVC group\" and tax_phylum = \"Verrucomicrobiota\"", "rows": [[1409818, "PRJEB7366_P_NODE_12502_length_227_cov_2.708333_g12068_i0", "PRJEB7366", "12502", "227", "2.708333", "6.14791591", "Nibricoccus sp. IMCC34717", "3034021", "Bacteria", "Bacteria", "340", "3.8499999999999996e-89", "", "NTclustered", "gi|2850969968|gb|CP119759.1|", "3034021", "g12068", "i0", "94.545", "78.1850220264317", "220", "12", "97", "0", "1", "220", "1403941", "1403722", "Nibricoccus sp. IMCC34717 chromosome, complete genome", "blastn", "17748", "340", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Opitutia", "Opitutales", "Opitutaceae", "Nibricoccus", "Nibricoccus sp. IMCC34717"], [1409819, "PRJEB7366_P_NODE_12782_length_224_cov_1.904762_g12348_i0", "PRJEB7366", "12782", "224", "1.904762", "4.26666688", "Nibricoccus sp. IMCC34717", "3034021", "Bacteria", "Bacteria", "327", "2.95e-85", "", "NTclustered", "gi|2850969968|gb|CP119759.1|", "3034021", "g12348", "i0", "92.92", "141.946428571429", "226", "14", "100", "1", "1", "224", "1405134", "1405359", "Nibricoccus sp. IMCC34717 chromosome, complete genome", "blastn", "31796", "327", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Opitutia", "Opitutales", "Opitutaceae", "Nibricoccus", "Nibricoccus sp. IMCC34717"], [3546110, "PRJEB7366_P_NODE_5723_length_374_cov_2.353982_g5290_i0", "PRJEB7366", "5723", "374", "2.353982", "8.80389268", "Opitutaceae", "134623", "Bacteria", "Bacteria", "669", "0", "", "NTclustered", "gi|2077391884|gb|CP080507.1|", "2862869", "g5290", "i0", "98.93", "196.580213903743", "374", "4", "100", "0", "1", "374", "541410", "541783", "Horticoccus luteus strain KSB-15 chromosome, complete genome", "blastn", "73521", "675", "0.991111111111111", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Opitutia", "Opitutales", "Opitutaceae", "Horticoccus", "Horticoccus luteus"], [5237805, "PRJEB7366_P_NODE_20385_length_168_cov_2.045113_g19951_i0", "PRJEB7366", "20385", "168", "2.045113", "3.43578984", "Nibricoccus sp. IMCC34717", "3034021", "Bacteria", "Bacteria", "250", "4.66e-62", "", "NTclustered", "gi|2850969968|gb|CP119759.1|", "3034021", "g19951", "i0", "96.104", "206.357142857143", "154", "5", "91", "1", "1", "153", "1403983", "1404136", "Nibricoccus sp. IMCC34717 chromosome, complete genome", "blastn", "34668", "250", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Opitutia", "Opitutales", "Opitutaceae", "Nibricoccus", "Nibricoccus sp. IMCC34717"], [7373081, "PRJEB7366_P_NODE_21286_length_164_cov_1.534884_g20852_i0", "PRJEB7366", "21286", "164", "1.534884", "2.51720976", "Verrucomicrobiales", "48461", "Bacteria", "Bacteria", "130", "6.15e-26", "", "NTclustered", "gi|2022020957|gb|CP059069.1|", "2562705", "g20852", "i0", "81.437", "128.90243902439", "167", "24", "99", "7", "1", "163", "3411503", "3411666", "Akkermansiaceae bacterium strain AJA081-3 chromosome, complete genome", "blastn", "21140", "130", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Akkermansiaceae", null, "Akkermansiaceae bacterium"], [9062500, "PRJEB7366_P_NODE_11688_length_237_cov_3.366337_g11254_i0", "PRJEB7366", "11688", "237", "3.366337", "7.97821869", "Nibricoccus sp. IMCC34717", "3034021", "Bacteria", "Bacteria", "348", "2.4200000000000006e-91", "", "NTclustered", "gi|2850969968|gb|CP119759.1|", "3034021", "g11254", "i0", "93.939", "32.3122362869198", "231", "13", "97", "1", "1", "231", "1404909", "1405138", "Nibricoccus sp. IMCC34717 chromosome, complete genome", "blastn", "7658", "348", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Opitutia", "Opitutales", "Opitutaceae", "Nibricoccus", "Nibricoccus sp. IMCC34717"], [16711911, "PRJEB7366_P_NODE_14334_length_208_cov_2.080925_g13900_i0", "PRJEB7366", "14334", "208", "2.080925", "4.328324", "Nibricoccus sp. IMCC34717", "3034021", "Bacteria", "Bacteria", "351", "1.6e-92", "", "NTclustered", "gi|2850969968|gb|CP119759.1|", "3034021", "g13900", "i0", "97.115", "82.3413461538462", "208", "6", "100", "0", "1", "208", "1404306", "1404513", "Nibricoccus sp. IMCC34717 chromosome, complete genome", "blastn", "17127", "351", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Opitutia", "Opitutales", "Opitutaceae", "Nibricoccus", "Nibricoccus sp. IMCC34717"], [17986867, "PRJEB7366_P_NODE_6615_length_342_cov_1.638436_g6181_i0", "PRJEB7366", "6615", "342", "1.638436", "5.60345112", "Verrucomicrobiia bacterium", "2499141", "Bacteria", "Bacteria", "399", "1e-106", "", "NTclustered", "gi|2621704341|emb|OY760937.1|", "2499141", "g6181", "i0", "87.941", "127.345029239766", "340", "39", "99", "2", "1", "339", "3991679", "3992017", "MAG: Verrucomicrobiae bacterium isolate 066a7682-a1ac-48de-8761-1470dc9e5c3e genome assembly, chromosome: 1", "blastn", "43552", "399", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", null, null, null, "Verrucomicrobiia bacterium"], [19260871, "PRJEB7366_P_NODE_7936_length_305_cov_2.088889_g7502_i0", "PRJEB7366", "7936", "305", "2.088889", "6.37111145", "Nibricoccus sp. IMCC34717", "3034021", "Bacteria", "Bacteria", "558", "1.37e-154", "", "NTclustered", "gi|2850969968|gb|CP119759.1|", "3034021", "g7502", "i0", "99.672", "97.5967213114754", "305", "1", "100", "0", "1", "305", "1404828", "1404524", "Nibricoccus sp. IMCC34717 chromosome, complete genome", "blastn", "29767", "558", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Opitutia", "Opitutales", "Opitutaceae", "Nibricoccus", "Nibricoccus sp. IMCC34717"], [20536134, "PRJEB7366_P_NODE_14457_length_207_cov_1.802326_g14023_i0", "PRJEB7366", "14457", "207", "1.802326", "3.73081482", "Verrucomicrobiia bacterium", "2499141", "Bacteria", "Bacteria", "200", "6.109999999999998e-47", "", "NTclustered", "gi|2621704341|emb|OY760937.1|", "2499141", "g14023", "i0", "91.724", "178.299516908213", "145", "11", "70", "1", "61", "204", "3990067", "3990211", "MAG: Verrucomicrobiae bacterium isolate 066a7682-a1ac-48de-8761-1470dc9e5c3e genome assembly, chromosome: 1", "blastn", "36908", "200", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", null, null, null, "Verrucomicrobiia bacterium"], [26970711, "PRJEB7366_P_NODE_12382_length_229_cov_1.329897_g11948_i0", "PRJEB7366", "12382", "229", "1.329897", "3.04546413", "Chthoniobacter sp.", "2510640", "Bacteria", "Bacteria", "110", "4.33e-26", "", "NR", "MCE9611332.1", "2510640", "g11948", "i0", "71.2", "2.86899563318777", "73", "21", "95.6", "0", "1", "219", "587", "659", "MCE9611332.1 transketolase [Chthoniobacter sp.]", "diamond", "657", "110", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Spartobacteria", "Chthoniobacterales", "Chthoniobacteraceae", "Chthoniobacter", "Chthoniobacter sp."], [27318721, "PRJEB7366_P_NODE_12903_length_223_cov_1.276596_g12469_i0", "PRJEB7366", "12903", "223", "1.276596", "2.84680908", "Verrucomicrobiia bacterium", "2499141", "Bacteria", "Bacteria", "53.9", "3.35e-6", "", "NR", "HEY1171809.1", "2499141", "g12469", "i0", "43.5", "0.928251121076233", "69", "37", "92.8", "1", "1", "207", "451", "517", "HEY1171809.1 ankyrin repeat domain-containing protein [Verrucomicrobiia bacterium]", "diamond", "207", "53.9", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", null, null, null, "Verrucomicrobiia bacterium"], [29837282, "PRJEB7366_P_NODE_19871_length_171_cov_1.176471_g19437_i0", "PRJEB7366", "19871", "171", "1.176471", "2.01176541", "PVC group", "1783257", "Bacteria", "Bacteria", "52", "7.56e-6", "", "NR", "MDB6077804.1", "2562705", "g19437", "i0", "47.5", "1.94736842105263", "59", "27", "96.5", "2", "169", "5", "133", "191", "MDB6077804.1 Por secretion system C-terminal sorting protein [Akkermansiaceae bacterium]", "diamond", "333", "52.4", "0.99236641221374", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Akkermansiaceae", null, "Akkermansiaceae bacterium"], [30097227, "PRJEB7366_P_NODE_23072_length_156_cov_1.983471_g22638_i0", "PRJEB7366", "23072", "156", "1.983471", "3.09421476", "Verrucomicrobiota bacterium JB022", "3064551", "Bacteria", "Bacteria", "84.3", "1.84e-17", "", "NR", "MDP0501723.1", "3064551", "g22638", "i0", "75", "1", "52", "13", "100", "0", "1", "156", "45", "96", "MDP0501723.1 ADP-forming succinate--CoA ligase subunit beta [Verrucomicrobiota bacterium JB022]", "diamond", "156", "84.3", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium JB022"], [30855582, "PRJEB7366_P_NODE_8654_length_288_cov_1.739130_g8220_i0", "PRJEB7366", "8654", "288", "1.73913", "5.0086944", "Verrucomicrobiota bacterium", "2026799", "Bacteria", "Bacteria", "116", "9.71e-28", "", "NR", "MEM9445814.1", "2026799", "g8220", "i0", "55", "1.9375", "100", "41", "100", "1", "288", "1", "510", "609", "MEM9445814.1 ATP-dependent chaperone ClpB [Verrucomicrobiota bacterium]", "diamond", "558", "116", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"], [32049999, "PRJEB7366_P_NODE_10718_length_251_cov_1.944444_g10284_i0", "PRJEB7366", "10718", "251", "1.944444", "4.88055444", "Bacteria", "2", "Bacteria", "Bacteria", "90.1", "8.98e-19", "", "NR", "MAD25628.1", "2026801", "g10284", "i0", "47.6", "4.85258964143426", "82", "41", "95.6", "2", "2", "241", "609", "690", "MAD25628.1 hypothetical protein [Verrucomicrobiales bacterium]", "diamond", "1218", "90.1", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", null, null, "Verrucomicrobiales bacterium"], [32563746, "PRJEB7366_P_NODE_10699_length_251_cov_2.981481_g10265_i0", "PRJEB7366", "10699", "251", "2.981481", "7.48351731", "Oceaniferula flava", "2800421", "Bacteria", "Bacteria", "42.7", "0.0407", "", "NR", "WP_309489737.1", "2800421", "g10265", "i0", "38.7", "0.896414342629482", "75", "45", "88.4", "1", "229", "8", "84", "158", "WP_309489737.1 polyamine aminopropyltransferase [Oceaniferula flava]", "diamond", "225", "42.7", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", "Oceaniferula", "Oceaniferula flava"]], "truncated": false, "filtered_table_rows_count": 17, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJEB7366", "p1": "PVC group", "p2": "Verrucomicrobiota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB7366&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "PRJEB7366", "label": "PRJEB7366", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB7366&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "blastn", "label": "blastn", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB7366&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota&analysis=blastn", "selected": false}, {"value": "diamond", "label": "diamond", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB7366&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota&analysis=diamond", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB7366&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB7366&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB7366&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "PVC group", "label": "PVC group", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB7366&tax_phylum=Verrucomicrobiota", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB7366&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB7366&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB7366&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "Verrucomicrobiota", "label": "Verrucomicrobiota", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB7366&tax_clade=PVC+group", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 224.26450900093187}