{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJEB6054\", tax_kingdom = \"Bacillati\" and tax_phylum = \"Actinomycetota\"", "rows": [[25658821, "PRJEB6054_S_NODE_11410_length_168_cov_3.511278_g11321_i0", "PRJEB6054", "11410", "168", "3.511278", "5.89894704", "Rothia mucilaginosa", "43675", "Bacteria", "Bacteria", "311", "2.11e-80", "", "NTclustered", "gi|1247210625|gb|CP023510.1|", "43675", "g11321", "i0", "100", "181.172619047619", "168", "0", "100", "0", "1", "168", "653922", "654089", "Rothia mucilaginosa strain FDAARGOS_369 chromosome, complete genome", "blastn", "30437", "311", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Micrococcaceae", "Rothia", "Rothia mucilaginosa"], [25659070, "PRJEB6054_S_NODE_5314_length_220_cov_1.951351_g5225_i0", "PRJEB6054", "5314", "220", "1.951351", "4.2929722", "Streptomyces sp. RTd22", "1841249", "Bacteria", "Bacteria", "198", "2.36e-46", "", "NTclustered", "gi|1031970216|gb|CP015726.1|", "1841249", "g5225", "i0", "93.893", "61.5181818181818", "131", "8", "60", "0", "1", "131", "9189409", "9189279", "Streptomyces sp. RTd22, complete genome", "blastn", "13534", "198", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Kitasatosporales", "Streptomycetaceae", "Streptomyces", "Streptomyces sp. RTd22"], [25751913, "PRJEB6054_S_NODE_842_length_398_cov_7.380165_g754_i0", "PRJEB6054", "842", "398", "7.380165", "29.3730567", "Cutibacterium", "1912216", "Bacteria", "Bacteria", "736", "0", "", "NTclustered", "gi|1446500593|gb|CP031442.1|", "1747", "g754", "i0", "100", "248.449748743719", "398", "0", "100", "0", "1", "398", "55742", "55345", "Cutibacterium acnes strain KCOM 1315 chromosome, complete genome", "blastn", "98883", "736", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Propionibacteriales", "Propionibacteriaceae", "Cutibacterium", "Cutibacterium acnes"], [25794948, "PRJEB6054_S_NODE_15171_length_153_cov_1.203390_g15082_i0", "PRJEB6054", "15171", "153", "1.20339", "1.8411867", "Micrococcaceae bacterium Sec5.1", "3114326", "Bacteria", "Bacteria", "272", "8.84e-69", "", "NTclustered", "gi|2732516938|gb|CP143430.1|", "3114326", "g15082", "i0", "98.693", "372.993464052288", "153", "2", "100", "0", "1", "153", "146485", "146637", "Micrococcaceae bacterium Sec5.1 chromosome, complete genome", "blastn", "57068", "272", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Micrococcaceae", null, "Micrococcaceae bacterium Sec5.1"], [25795054, "PRJEB6054_S_NODE_3395_length_254_cov_4.470320_g3306_i0", "PRJEB6054", "3395", "254", "4.47032", "11.3546128", "Corynebacterium marquesiae", "2913503", "Bacteria", "Bacteria", "470", "5.37e-128", "", "NTclustered", "gi|2869813080|gb|CP175783.1|", "2913503", "g3306", "i0", "100", "365.964566929134", "254", "0", "100", "0", "1", "254", "3358", "3105", "Corynebacterium marquesiae strain YSMAA1_2_D10 chromosome, complete genome", "blastn", "92955", "470", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Corynebacteriaceae", "Corynebacterium", "Corynebacterium marquesiae"], [25887558, "PRJEB6054_S_NODE_10811_length_172_cov_1.167883_g10722_i0", "PRJEB6054", "10811", "172", "1.167883", "2.00875876", "Corynebacterium", "1716", "Bacteria", "Bacteria", "287", "3.63e-73", "", "NTclustered", "gi|2869804070|gb|CP175770.1|", "38304", "g10722", "i0", "100", "322.087209302326", "155", "0", "90", "0", "1", "155", "623915", "624069", "Corynebacterium tuberculostearicum strain YSMAA5_1_B12 chromosome, complete genome", "blastn", "55399", "287", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Corynebacteriaceae", "Corynebacterium", "Corynebacterium tuberculostearicum"], [26023867, "PRJEB6054_S_NODE_2060_length_302_cov_50676.943820_g1971_i0", "PRJEB6054", "2060", "302", "50676.94382", "153044.3703364", "Cutibacterium", "1912216", "Bacteria", "Bacteria", "427", "3.9999999999999998e-115", "", "NTclustered", "gi|1446500593|gb|CP031442.1|", "1747", "g1971", "i0", "100", "219.62582781457", "231", "0", "76", "0", "72", "302", "57316", "57086", "Cutibacterium acnes strain KCOM 1315 chromosome, complete genome", "blastn", "66327", "427", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Propionibacteriales", "Propionibacteriaceae", "Cutibacterium", "Cutibacterium acnes"], [26295839, "PRJEB6054_S_NODE_4174_length_235_cov_2.310000_g4085_i0", "PRJEB6054", "4174", "235", "2.31", "5.4285", "Cutibacterium", "1912216", "Bacteria", "Bacteria", "407", "3.9e-109", "", "NTclustered", "gi|1446500593|gb|CP031442.1|", "1747", "g4085", "i0", "100", "285.387234042553", "220", "0", "94", "0", "16", "235", "55865", "56084", "Cutibacterium acnes strain KCOM 1315 chromosome, complete genome", "blastn", "67066", "407", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Propionibacteriales", "Propionibacteriaceae", "Cutibacterium", "Cutibacterium acnes"], [26431801, "PRJEB6054_S_NODE_4823_length_227_cov_6.161458_g4734_i0", "PRJEB6054", "4823", "227", "6.161458", "13.98650966", "Cutibacterium", "1912216", "Bacteria", "Bacteria", "320", "5.02e-83", "", "NTclustered", "gi|1446500593|gb|CP031442.1|", "1747", "g4734", "i0", "99.432", "201.493392070485", "176", "1", "78", "0", "52", "227", "57101", "56926", "Cutibacterium acnes strain KCOM 1315 chromosome, complete genome", "blastn", "45739", "320", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Propionibacteriales", "Propionibacteriaceae", "Cutibacterium", "Cutibacterium acnes"], [26431834, "PRJEB6054_S_NODE_7999_length_189_cov_3.350649_g7910_i0", "PRJEB6054", "7999", "189", "3.350649", "6.33272661", "Propionibacteriaceae", "31957", "Bacteria", "Bacteria", "287", "4.08e-73", "", "NTclustered", "gi|1446500593|gb|CP031442.1|", "1747", "g7910", "i0", "97.605", "260.380952380952", "167", "4", "88", "0", "23", "189", "57968", "57802", "Cutibacterium acnes strain KCOM 1315 chromosome, complete genome", "blastn", "49212", "287", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Propionibacteriales", "Propionibacteriaceae", "Cutibacterium", "Cutibacterium acnes"], [26475517, "PRJEB6054_S_NODE_10816_length_172_cov_1.014599_g10727_i0", "PRJEB6054", "10816", "172", "1.014599", "1.74511028", "Phycicoccus jejuensis", "367299", "Bacteria", "Bacteria", "285", "1.31e-72", "", "NTclustered", "gi|2851167701|gb|CP085209.1|", "367299", "g10727", "i0", "96.512", "134.703488372093", "172", "6", "100", "0", "1", "172", "2273140", "2273311", "Phycicoccus jejuensis strain QJJ-866 chromosome, complete genome", "blastn", "23169", "285", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Intrasporangiaceae", "Phycicoccus", "Phycicoccus jejuensis"], [26475594, "PRJEB6054_S_NODE_15368_length_152_cov_4.042735_g15279_i0", "PRJEB6054", "15368", "152", "4.042735", "6.1449572", "Lawsonella clevelandensis", "1528099", "Bacteria", "Bacteria", "259", "6.82e-65", "", "NTclustered", "gi|1723592958|emb|LR584267.1|", "1528099", "g15279", "i0", "97.368", "285.809210526316", "152", "4", "100", "0", "1", "152", "551905", "551754", "Lawsonella clevelandensis isolate USB-603019 genome assembly, chromosome: 1", "blastn", "43443", "259", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Lawsonellaceae", "Lawsonella", "Lawsonella clevelandensis"], [32945979, "PRJEB6054_S_NODE_13578_length_158_cov_1.243902_g13489_i0", "PRJEB6054", "13578", "158", "1.243902", "1.96536516", "Spongiactinospora sp. TRM9", "2871673", "Bacteria", "Bacteria", "62.8", "9.79e-10", "", "NR", "WP_277307989.1", "3031114", "g13489", "i0", "62.7", "0.968354430379747", "51", "19", "96.8", "0", "153", "1", "95", "145", "WP_277307989.1 M20 metallopeptidase family protein [Spongiactinospora sp. TRM90649]", "diamond", "153", "62.8", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Streptosporangiales", "Streptosporangiaceae", "Spongiactinospora", "Spongiactinospora sp. TRM90649"], [33116574, "PRJEB6054_S_NODE_7159_length_197_cov_1.234568_g7070_i0", "PRJEB6054", "7159", "197", "1.234568", "2.43209896", "unclassified Streptomyces", "2593676", "Bacteria", "Bacteria", "42.7", "0.0202", "", "NR", "WP_398017753.1", "2593676", "g7070", "i0", "45.7", "0.700507614213198", "46", "22", "70.1", "1", "178", "41", "132", "174", "WP_398017753.1 MULTISPECIES: IS110 family transposase [unclassified Streptomyces]", "diamond", "138", "42.7", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Kitasatosporales", "Streptomycetaceae", "Streptomyces", null]], "truncated": false, "filtered_table_rows_count": 14, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_kingdom\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJEB6054", "p1": "Bacillati", "p2": "Actinomycetota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB6054&tax_kingdom=Bacillati&tax_phylum=Actinomycetota", "results": [{"value": "PRJEB6054", "label": "PRJEB6054", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_kingdom=Bacillati&tax_phylum=Actinomycetota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB6054&tax_kingdom=Bacillati&tax_phylum=Actinomycetota", "results": [{"value": "blastn", "label": "blastn", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB6054&tax_kingdom=Bacillati&tax_phylum=Actinomycetota&analysis=blastn", "selected": false}, {"value": "diamond", "label": "diamond", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB6054&tax_kingdom=Bacillati&tax_phylum=Actinomycetota&analysis=diamond", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB6054&tax_kingdom=Bacillati&tax_phylum=Actinomycetota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB6054&tax_kingdom=Bacillati&tax_phylum=Actinomycetota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB6054&tax_kingdom=Bacillati&tax_phylum=Actinomycetota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB6054&tax_kingdom=Bacillati&tax_phylum=Actinomycetota", "results": [{"value": "Bacillati", "label": "Bacillati", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB6054&tax_phylum=Actinomycetota", "selected": true}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB6054&tax_kingdom=Bacillati&tax_phylum=Actinomycetota", "results": [{"value": "Actinomycetota", "label": "Actinomycetota", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB6054&tax_kingdom=Bacillati", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 282.3988599993754}