{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJEB28062\", tax_kingdom = \"Thermotogati\" and tax_phylum = \"Synergistota\"", "rows": [[5127564, "PRJEB28062_P_NODE_61965_length_443_cov_13.135135_g59605_i0", "PRJEB28062", "61965", "443", "13.135135", "58.18864805", "Thermanaerovibrio acidaminovorans", "81462", "Bacteria", "Bacteria", "701", "0", "", "NTclustered", "gi|269099254|gb|CP001818.1|", "525903", "g59605", "i0", "98.492", "0.898419864559819", "398", "5", "90", "1", "26", "422", "1549186", "1548789", "Thermanaerovibrio acidaminovorans DSM 6589, complete genome", "blastn", "398", "701", "1", "Bacteria", null, "Thermotogati", "Synergistota", "Synergistia", "Synergistales", "Synergistaceae", "Thermanaerovibrio", "Thermanaerovibrio acidaminovorans"], [10228438, "PRJEB28062_P_NODE_87709_length_352_cov_7.193548_g85347_i0", "PRJEB28062", "87709", "352", "7.193548", "25.32128896", "Thermanaerovibrio acidaminovorans", "81462", "Bacteria", "Bacteria", "588", "2.05e-163", "", "NTclustered", "gi|269099254|gb|CP001818.1|", "525903", "g85347", "i0", "98.792", "10.3892045454545", "331", "3", "94", "1", "14", "343", "233124", "233454", "Thermanaerovibrio acidaminovorans DSM 6589, complete genome", "blastn", "3657", "588", "1", "Bacteria", null, "Thermotogati", "Synergistota", "Synergistia", "Synergistales", "Synergistaceae", "Thermanaerovibrio", "Thermanaerovibrio acidaminovorans"], [12777797, "PRJEB28062_P_NODE_18051_length_889_cov_3.942402_g16072_i0", "PRJEB28062", "18051", "889", "3.942402", "35.04795378", "Fretibacterium fastidiosum", "651822", "Bacteria", "Bacteria", "854", "0", "", "NTclustered", "gi|2869663113|emb|OZ209244.1|", "651822", "g16072", "i0", "97.228", "1.11361079865017", "505", "13", "57", "1", "368", "871", "2002930", "2003434", "Fretibacterium fastidiosum strain SGP1 genome assembly, chromosome: Ff3", "blastn", "990", "854", "1", "Bacteria", null, "Thermotogati", "Synergistota", "Synergistia", "Synergistales", "Aminobacteriaceae", "Fretibacterium", "Fretibacterium fastidiosum"], [26906640, "PRJEB28062_P_NODE_133762_length_230_cov_2.579618_g131398_i0", "PRJEB28062", "133762", "230", "2.579618", "5.9331214", "Synergistales bacterium", "2268201", "Bacteria", "Bacteria", "45.8", "0.00133", "", "NR", "HOO89166.1", "2268201", "g131398", "i0", "72.7", "1.16086956521739", "22", "6", "28.7", "0", "5", "70", "116", "137", "HOO89166.1 GDP-mannose 4,6-dehydratase [Synergistales bacterium]", "diamond", "267", "45.8", "1", "Bacteria", null, "Thermotogati", "Synergistota", "Synergistia", "Synergistales", null, null, "Synergistales bacterium"], [29054451, "PRJEB28062_P_NODE_112648_length_279_cov_3.140777_g110285_i0", "PRJEB28062", "112648", "279", "3.140777", "8.76276783", "Synergistaceae bacterium", "2053624", "Bacteria", "Bacteria", "72.4", "1.22e-12", "", "NR", "MBQ6737035.1", "2053624", "g110285", "i0", "40", "1.50537634408602", "70", "42", "75.3", "0", "260", "51", "4", "73", "MBQ6737035.1 DUF2800 domain-containing protein [Synergistaceae bacterium]", "diamond", "420", "72.4", "1", "Bacteria", null, "Thermotogati", "Synergistota", "Synergistia", "Synergistales", "Synergistaceae", null, "Synergistaceae bacterium"], [29780498, "PRJEB28062_P_NODE_54631_length_478_cov_8.479012_g52278_i0", "PRJEB28062", "54631", "478", "8.479012", "40.52967736", "uncultured Fretibacterium sp.", "1678694", "Bacteria", "Bacteria", "192", "5.7499999999999985e-56", "", "NR", "WP_299300527.1", "1678694", "g52278", "i0", "90", "0.690376569037657", "110", "11", "69", "0", "36", "365", "347", "456", "WP_299300527.1 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [uncultured Fretibacterium sp.]", "diamond", "330", "192", "1", "Bacteria", null, "Thermotogati", "Synergistota", "Synergistia", "Synergistales", "Aminobacteriaceae", "Fretibacterium", "uncultured Fretibacterium sp."], [29843676, "PRJEB28062_P_NODE_45591_length_532_cov_21.137255_g43251_i0", "PRJEB28062", "45591", "532", "21.137255", "112.4501966", "Fretibacterium sp.", "2699746", "Bacteria", "Bacteria", "167", "8.599999999999999e-48", "", "NR", "NLL37143.1", "2699746", "g43251", "i0", "80.4", "1.7593984962406", "102", "20", "57.5", "0", "327", "22", "3", "104", "NLL37143.1 ABC transporter permease [Fretibacterium sp.]", "diamond", "936", "167", "1", "Bacteria", null, "Thermotogati", "Synergistota", "Synergistia", "Synergistales", "Aminobacteriaceae", "Fretibacterium", "Fretibacterium sp."], [30633345, "PRJEB28062_P_NODE_59993_length_452_cov_8.065963_g57633_i0", "PRJEB28062", "59993", "452", "8.065963", "36.45815276", "Synergistaceae bacterium", "2053624", "Bacteria", "Bacteria", "63.2", "2.26e-8", "", "NR", "MEA4872224.1", "2053624", "g57633", "i0", "33.6", "0.969026548672566", "146", "88", "92.9", "7", "19", "438", "42", "184", "MEA4872224.1 zinc ribbon domain-containing protein [Synergistaceae bacterium]", "diamond", "438", "63.2", "1", "Bacteria", null, "Thermotogati", "Synergistota", "Synergistia", "Synergistales", "Synergistaceae", null, "Synergistaceae bacterium"], [30759973, "PRJEB28062_P_NODE_18454_length_878_cov_8.404969_g16467_i0", "PRJEB28062", "18454", "878", "8.404969", "73.795627820000007", "uncultured Fretibacterium sp.", "1678694", "Bacteria", "Bacteria", "420", "1.5099999999999999e-142", "", "NR", "WP_299301840.1", "1678694", "g16467", "i0", "92.9", "0.765375854214123", "224", "16", "76.5", "0", "4", "675", "272", "495", "WP_299301840.1 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [uncultured Fretibacterium sp.]", "diamond", "672", "420", "1", "Bacteria", null, "Thermotogati", "Synergistota", "Synergistia", "Synergistales", "Aminobacteriaceae", "Fretibacterium", "uncultured Fretibacterium sp."], [31075980, "PRJEB28062_P_NODE_33435_length_635_cov_9.846975_g31124_i0", "PRJEB28062", "33435", "635", "9.846975", "62.52829125", "uncultured Fretibacterium sp.", "1678694", "Bacteria", "Bacteria", "347", "1.0799999999999999e-116", "", "NR", "WP_299076655.1", "1678694", "g31124", "i0", "94", "0.949606299212598", "201", "12", "95", "0", "22", "624", "125", "325", "WP_299076655.1 ABC transporter permease [uncultured Fretibacterium sp.]", "diamond", "603", "347", "1", "Bacteria", null, "Thermotogati", "Synergistota", "Synergistia", "Synergistales", "Aminobacteriaceae", "Fretibacterium", "uncultured Fretibacterium sp."], [31392225, "PRJEB28062_P_NODE_87476_length_353_cov_2.689286_g85114_i0", "PRJEB28062", "87476", "353", "2.689286", "9.49317958", "uncultured Fretibacterium sp.", "1678694", "Bacteria", "Bacteria", "159", "2.7e-44", "", "NR", "WP_347712700.1", "1678694", "g85114", "i0", "88.4", "0.807365439093484", "95", "11", "80.7", "0", "2", "286", "2", "96", "WP_347712700.1 hypothetical protein [uncultured Fretibacterium sp.]", "diamond", "285", "159", "1", "Bacteria", null, "Thermotogati", "Synergistota", "Synergistia", "Synergistales", "Aminobacteriaceae", "Fretibacterium", "uncultured Fretibacterium sp."], [32467878, "PRJEB28062_P_NODE_111319_length_283_cov_1.366667_g108956_i0", "PRJEB28062", "111319", "283", "1.366667", "3.86766761", "Synergistota bacterium", "2268202", "Bacteria", "Bacteria", "90.5", "3.93e-20", "", "NR", "MCS7233147.1", "2268202", "g108956", "i0", "63.4", "2.93639575971731", "93", "34", "98.6", "0", "279", "1", "16", "108", "MCS7233147.1 4Fe-4S binding protein [Synergistota bacterium]", "diamond", "831", "90.5", "1", "Bacteria", null, "Thermotogati", "Synergistota", null, null, null, null, "Synergistota bacterium"]], "truncated": false, "filtered_table_rows_count": 12, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_kingdom\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJEB28062", "p1": "Thermotogati", "p2": "Synergistota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB28062&tax_kingdom=Thermotogati&tax_phylum=Synergistota", "results": [{"value": "PRJEB28062", "label": "PRJEB28062", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_kingdom=Thermotogati&tax_phylum=Synergistota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB28062&tax_kingdom=Thermotogati&tax_phylum=Synergistota", "results": [{"value": "diamond", "label": "diamond", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB28062&tax_kingdom=Thermotogati&tax_phylum=Synergistota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB28062&tax_kingdom=Thermotogati&tax_phylum=Synergistota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB28062&tax_kingdom=Thermotogati&tax_phylum=Synergistota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB28062&tax_kingdom=Thermotogati&tax_phylum=Synergistota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB28062&tax_kingdom=Thermotogati&tax_phylum=Synergistota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB28062&tax_kingdom=Thermotogati&tax_phylum=Synergistota", "results": [{"value": "Thermotogati", "label": "Thermotogati", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB28062&tax_phylum=Synergistota", "selected": true}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJEB28062&tax_kingdom=Thermotogati&tax_phylum=Synergistota", "results": [{"value": "Synergistota", "label": "Synergistota", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB28062&tax_kingdom=Thermotogati", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 321.70592100010253}