{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJDB4470\", tax_clade = \"FCB group\" and tax_phylum = \"Gemmatimonadota\"", "rows": [[5112328, "PRJDB4470_P_NODE_94125_length_177_cov_1.492188_g92970_i0", "PRJDB4470", "94125", "177", "1.492188", "2.64117276", "Gemmatimonadales bacterium", "2448054", "Bacteria", "Bacteria", "62", "1.4e-9", "", "NR", "HZM26761.1", "2448054", "g92970", "i0", "60.3", "3.74576271186441", "58", "23", "98.3", "0", "2", "175", "37", "94", "HZM26761.1 SDR family oxidoreductase [Gemmatimonadales bacterium]", "diamond", "663", "62", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "Gemmatimonadales bacterium"], [6387379, "PRJDB4470_P_NODE_114106_length_164_cov_1.382609_g112951_i0", "PRJDB4470", "114106", "164", "1.382609", "2.26747876", "uncultured Gemmatimonadales bacterium", "412054", "Bacteria", "Bacteria", "207", "2.76e-49", "", "NTclustered", "gi|2874253978|emb|OY970303.1|", "412054", "g112951", "i0", "90.506", "63.4817073170732", "158", "13", "96", "2", "8", "164", "8261566", "8261410", "MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1", "blastn", "10411", "207", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "uncultured Gemmatimonadales bacterium"], [24234966, "PRJDB4470_P_NODE_110800_length_165_cov_0.896552_g109645_i0", "PRJDB4470", "110800", "165", "0.896552", "1.4793108", "Longimicrobiales bacterium", "2910168", "Bacteria", "Bacteria", "178", "2.18e-40", "", "NTclustered", "gi|2621703510|emb|OY762557.1|", "2910168", "g109645", "i0", "86.585", "105.569696969697", "164", "18", "98", "4", "4", "165", "3610655", "3610494", "MAG: Longimicrobiales bacterium isolate c10e2151-7d97-4465-9cf7-a78a4796a63d genome assembly, chromosome: 1", "blastn", "17419", "178", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Longimicrobiia", "Longimicrobiales", null, null, "Longimicrobiales bacterium"], [27822403, "PRJDB4470_P_NODE_70584_length_219_cov_1.794118_g69429_i0", "PRJDB4470", "70584", "219", "1.794118", "3.92911842", "Gemmatimonadota bacterium", "2026742", "Bacteria", "Bacteria", "120", "3.7199999999999995e-30", "", "NR", "MBL8988644.1", "2026742", "g69429", "i0", "78.9", "3.87671232876712", "71", "15", "97.3", "0", "214", "2", "330", "400", "MBL8988644.1 aldehyde dehydrogenase family protein [Gemmatimonadota bacterium]", "diamond", "849", "120", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadota bacterium"], [28895567, "PRJDB4470_P_NODE_100528_length_169_cov_1.275000_g99373_i0", "PRJDB4470", "100528", "169", "1.275", "2.15475", "Gemmatimonadota bacterium", "2026742", "Bacteria", "Bacteria", "77.8", "5.71e-15", "", "NR", "PYO77019.1", "2026742", "g99373", "i0", "67.3", "3.83431952662722", "55", "18", "97.6", "0", "3", "167", "286", "340", "PYO77019.1 MAG: amino acid permease [Gemmatimonadota bacterium]", "diamond", "648", "77.8", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadota bacterium"], [29900350, "PRJDB4470_P_NODE_105411_length_167_cov_0.864407_g104256_i0", "PRJDB4470", "105411", "167", "0.864407", "1.44355969", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "45.8", "0.0011", "", "NR", "HET7584929.1", "2026741", "g104256", "i0", "45.5", "4.88622754491018", "55", "29", "97", "1", "164", "3", "568", "622", "HET7584929.1 tetratricopeptide repeat protein [Gemmatimonadaceae bacterium]", "diamond", "816", "45.8", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", null, "Gemmatimonadaceae bacterium"], [31391424, "PRJDB4470_P_NODE_65016_length_234_cov_1.654054_g63861_i0", "PRJDB4470", "65016", "234", "1.654054", "3.87048636", "Gemmatimonadaceae bacterium", "2026741", "Bacteria", "Bacteria", "69.3", "1.3e-11", "", "NR", "HEX6535207.1", "2026741", "g63861", "i0", "62.7", "1.26923076923077", "51", "18", "65.4", "1", "4", "156", "197", "246", "HEX6535207.1 OmpA family protein [Gemmatimonadaceae bacterium]", "diamond", "297", "69.3", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", null, "Gemmatimonadaceae bacterium"], [32055487, "PRJDB4470_P_NODE_102458_length_168_cov_0.873950_g101303_i0", "PRJDB4470", "102458", "168", "0.87395", "1.468236", "Longimicrobiales bacterium", "2910168", "Bacteria", "Bacteria", "42.4", "0.0191", "", "NR", "HET9982412.1", "2910168", "g101303", "i0", "41.8", "0.982142857142857", "55", "29", "98.2", "1", "4", "168", "69", "120", "HET9982412.1 hypothetical protein [Longimicrobiales bacterium]", "diamond", "165", "42.4", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Longimicrobiia", "Longimicrobiales", null, null, "Longimicrobiales bacterium"], [32150558, "PRJDB4470_P_NODE_109778_length_166_cov_0.863248_g108623_i0", "PRJDB4470", "109778", "166", "0.863248", "1.43299168", "Gemmatimonadetes bacterium T265", "2839016", "Bacteria", "Bacteria", "71.6", "1.13e-13", "", "NR", "GJG88110.1", "2839016", "g108623", "i0", "84.1", "0.795180722891566", "44", "7", "79.5", "0", "2", "133", "144", "187", "GJG88110.1 hypothetical protein tb265_32910 [Gemmatimonadetes bacterium T265]", "diamond", "132", "71.6", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadetes bacterium T265"], [32182253, "PRJDB4470_P_NODE_86678_length_188_cov_0.892086_g85523_i0", "PRJDB4470", "86678", "188", "0.892086", "1.67712168", "Gemmatimonadales bacterium", "2448054", "Bacteria", "Bacteria", "41.6", "0.0402", "", "NR", "HEY6222781.1", "2448054", "g85523", "i0", "44.9", "0.781914893617021", "49", "22", "78.2", "1", "8", "154", "105", "148", "HEY6222781.1 transporter [Gemmatimonadales bacterium]", "diamond", "147", "41.6", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "Gemmatimonadales bacterium"]], "truncated": false, "filtered_table_rows_count": 10, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJDB4470", "p1": "FCB group", "p2": "Gemmatimonadota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJDB4470&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "PRJDB4470", "label": "PRJDB4470", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJDB4470&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "diamond", "label": "diamond", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJDB4470&tax_clade=FCB+group&tax_phylum=Gemmatimonadota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJDB4470&tax_clade=FCB+group&tax_phylum=Gemmatimonadota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJDB4470&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJDB4470&tax_clade=FCB+group&tax_phylum=Gemmatimonadota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJDB4470&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "FCB group", "label": "FCB group", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJDB4470&tax_phylum=Gemmatimonadota", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJDB4470&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJDB4470&tax_clade=FCB+group&tax_phylum=Gemmatimonadota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJDB4470&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "Gemmatimonadota", "label": "Gemmatimonadota", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJDB4470&tax_clade=FCB+group", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 310.3088999996544}