{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJDB12578\" and tax_superkingdom = \"Archaea\"", "rows": [[3828625, "PRJDB12578_S_NODE_156344_length_197_cov_1.391892_g133286_i0", "PRJDB12578", "156344", "197", "1.391892", "2.74202724", "Methanobacterium sp. MB1", "1379702", "Archaea", "Archaea", "54.7", "0.005", "", "NTclustered", "gi|557945513|emb|HG425166.1|", "1379702", "g133286", "i0", "100", "0.147208121827411", "29", "0", "15", "0", "75", "103", "1495608", "1495636", "Methanobacterium sp. MB1 complete sequence", "blastn", "29", "54.7", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium sp. MB1"], [5105549, "PRJDB12578_S_NODE_173905_length_182_cov_1.924812_g150847_i0", "PRJDB12578", "173905", "182", "1.924812", "3.50315784", "Candidatus Nitrosocosmicus hydrocola", "1826872", "Archaea", "Archaea", "54.7", "0.004", "", "NTclustered", "gi|1100598057|gb|CP017922.1|", "1826872", "g150847", "i0", "92.308", "0.214285714285714", "39", "1", "21", "2", "105", "142", "411607", "411644", "Candidatus Nitrosocosmicus hydrocola strain G61, complete genome", "blastn", "39", "54.7", "1", "Archaea", null, "Thermoproteati", "Nitrososphaerota", "Nitrososphaeria", "Nitrososphaerales", "Nitrososphaeraceae", "Candidatus Nitrosocosmicus", "Candidatus Nitrosocosmicus hydrocola"], [11480147, "PRJDB12578_S_NODE_148170_length_205_cov_1.301282_g125112_i0", "PRJDB12578", "148170", "205", "1.301282", "2.6676281", "uncultured Methanobacteriaceae archaeon", "176233", "Archaea", "Archaea", "52.8", "0.018", "", "NTclustered", "gi|2874253877|emb|OY969932.1|", "176233", "g125112", "i0", "100", "0.136585365853659", "28", "0", "14", "0", "37", "64", "2275428", "2275401", "MAG: uncultured Methanobacteriaceae archaeon isolate MFD09286.bin.c.5 genome assembly, chromosome: 1", "blastn", "28", "52.8", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", null, "uncultured Methanobacteriaceae archaeon"], [28737796, "PRJDB12578_S_NODE_111887_length_259_cov_2.447619_g88829_i0", "PRJDB12578", "111887", "259", "2.447619", "6.33933321", "Methanocorpusculum sp.", "2058474", "Archaea", "Archaea", "41.6", "0.0191", "", "NR", "HJJ84672.1", "2058474", "g88829", "i0", "30.8", "0.752895752895753", "65", "45", "75.3", "0", "201", "7", "5", "69", "HJJ84672.1 hypothetical protein [Methanocorpusculum sp.]", "diamond", "195", "41.6", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Methanomicrobia", "Methanomicrobiales", "Methanocorpusculaceae", "Methanocorpusculum", "Methanocorpusculum sp."], [30348886, "PRJDB12578_S_NODE_159632_length_194_cov_1.413793_g136574_i0", "PRJDB12578", "159632", "194", "1.413793", "2.74275842", "Metallosphaera yellowstonensis", "1111107", "Archaea", "Archaea", "42.7", "0.0193", "", "NR", "WP_009071739.1", "1111107", "g136574", "i0", "39.1", "0.989690721649485", "64", "27", "83.5", "2", "18", "179", "49", "110", "WP_009071739.1 RsmB/NOP family class I SAM-dependent RNA methyltransferase [Metallosphaera yellowstonensis]", "diamond", "192", "42.7", "1", "Archaea", null, "Thermoproteati", "Thermoproteota", "Thermoprotei", "Sulfolobales", "Sulfolobaceae", "Metallosphaera", "Metallosphaera yellowstonensis"], [31391343, "PRJDB12578_S_NODE_73196_length_458_cov_3.176039_g50163_i0", "PRJDB12578", "73196", "458", "3.176039", "14.54625862", "Candidatus Nanoarchaeia archaeon", "2910166", "Archaea", "Archaea", "43.9", "0.0198", "", "NR", "MDD2444709.1", "2910166", "g50163", "i0", "37", "0.301310043668122", "46", "29", "30.1", "0", "103", "240", "2", "47", "MDD2444709.1 translation initiation factor [Candidatus Nanoarchaeia archaeon]", "diamond", "138", "43.9", "1", "Archaea", null, "Nanobdellati", "Nanobdellota", "Candidatus Nanoarchaeia", null, null, null, "Candidatus Nanoarchaeia archaeon"], [31707466, "PRJDB12578_S_NODE_214877_length_162_cov_0.902655_g191819_i0", "PRJDB12578", "214877", "162", "0.902655", "1.4623011", "Ferroplasma sp.", "2591003", "Archaea", "Archaea", "42.4", "0.00539", "", "NR", "WP_298279406.1", "2591003", "g191819", "i0", "39.1", "0.851851851851852", "46", "28", "85.2", "0", "142", "5", "4", "49", "WP_298279406.1 TA0956 family protein [Ferroplasma sp.]", "diamond", "138", "42.4", "1", "Archaea", null, "Methanobacteriati", "Thermoplasmatota", "Thermoplasmata", "Thermoplasmatales", "Ferroplasmaceae", "Ferroplasma", "Ferroplasma sp."]], "truncated": false, "filtered_table_rows_count": 7, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_superkingdom\" = :p1 order by rowid limit 101", "params": {"p0": "PRJDB12578", "p1": "Archaea"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJDB12578&tax_superkingdom=Archaea", "results": [{"value": "PRJDB12578", "label": "PRJDB12578", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_superkingdom=Archaea", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJDB12578&tax_superkingdom=Archaea", "results": [{"value": "diamond", "label": "diamond", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJDB12578&tax_superkingdom=Archaea&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJDB12578&tax_superkingdom=Archaea&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJDB12578&tax_superkingdom=Archaea", "results": [{"value": "Archaea", "label": "Archaea", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJDB12578", "selected": true}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJDB12578&tax_superkingdom=Archaea", "results": [{"value": "Methanomada group", "label": "Methanomada group", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJDB12578&tax_superkingdom=Archaea&tax_clade=Methanomada+group", "selected": false}, {"value": "Stenosarchaea group", "label": "Stenosarchaea group", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJDB12578&tax_superkingdom=Archaea&tax_clade=Stenosarchaea+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJDB12578&tax_superkingdom=Archaea", "results": [{"value": "Methanobacteriati", "label": "Methanobacteriati", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJDB12578&tax_superkingdom=Archaea&tax_kingdom=Methanobacteriati", "selected": false}, {"value": "Thermoproteati", "label": "Thermoproteati", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJDB12578&tax_superkingdom=Archaea&tax_kingdom=Thermoproteati", "selected": false}, {"value": "Nanobdellati", "label": "Nanobdellati", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJDB12578&tax_superkingdom=Archaea&tax_kingdom=Nanobdellati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJDB12578&tax_superkingdom=Archaea", "results": [{"value": "Methanobacteriota", "label": "Methanobacteriota", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJDB12578&tax_superkingdom=Archaea&tax_phylum=Methanobacteriota", "selected": false}, {"value": "Nanobdellota", "label": "Nanobdellota", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJDB12578&tax_superkingdom=Archaea&tax_phylum=Nanobdellota", "selected": false}, {"value": "Nitrososphaerota", "label": "Nitrososphaerota", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJDB12578&tax_superkingdom=Archaea&tax_phylum=Nitrososphaerota", "selected": false}, {"value": "Thermoplasmatota", "label": "Thermoplasmatota", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJDB12578&tax_superkingdom=Archaea&tax_phylum=Thermoplasmatota", "selected": false}, {"value": "Thermoproteota", "label": "Thermoproteota", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJDB12578&tax_superkingdom=Archaea&tax_phylum=Thermoproteota", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 184.02633900404908}