{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA994052\" and tax_phylum = \"Thermodesulfobacteriota\"", "rows": [[26963011, "PRJNA994052_P_NODE_15062_length_313_cov_15.458333_g13841_i0", "PRJNA994052", "15062", "313", "15.458333", "48.38458229", "Smithella sp.", "2053614", "Bacteria", "Bacteria", "158", "9.5e-47", "", "NR", "MEN6623046.1", "2053614", "g13841", "i0", "83", "0.843450479233227", "88", "14", "84.3", "1", "3", "266", "102", "188", "MEN6623046.1 phage tail protein [Smithella sp.]", "diamond", "264", "158", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Syntrophia", "Syntrophales", "Smithellaceae", "Smithella", "Smithella sp."], [27690306, "PRJNA994052_P_NODE_56024_length_232_cov_6.295597_g54769_i0", "PRJNA994052", "56024", "232", "6.295597", "14.60578504", "Desulfovibrio sp.", "885", "Bacteria", "Bacteria", "40.4", "0.0475", "", "NR", "MBC17444.1", "885", "g54769", "i0", "45.2", "0.543103448275862", "42", "23", "54.3", "0", "105", "230", "9", "50", "MBC17444.1 hypothetical protein [Desulfovibrio sp.]", "diamond", "126", "40.4", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfovibrionia", "Desulfovibrionales", "Desulfovibrionaceae", "Desulfovibrio", "Desulfovibrio sp."], [28132110, "PRJNA994052_P_NODE_36545_length_266_cov_7.103627_g35299_i0", "PRJNA994052", "36545", "266", "7.103627", "18.89564782", "Desulfosalsimonadaceae bacterium", "3060584", "Bacteria", "Bacteria", "43.1", "0.0376", "", "NR", "MDO9265179.1", "3060584", "g35299", "i0", "42", "0.56390977443609", "50", "25", "56.4", "1", "14", "163", "2345", "2390", "MDO9265179.1 DUF1566 domain-containing protein [Desulfosalsimonadaceae bacterium]", "diamond", "150", "43.1", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfobacteria", "Desulfobacterales", "Desulfosalsimonadaceae", null, "Desulfosalsimonadaceae bacterium"], [28194922, "PRJNA994052_P_NODE_77646_length_203_cov_44.469231_g76389_i0", "PRJNA994052", "77646", "203", "44.469231", "90.27253893", "Desulfuromusa sp.", "2614228", "Bacteria", "Bacteria", "72.8", "5.56e-13", "", "NR", "MCD6582391.1", "2614228", "g76389", "i0", "43.3", "1.95073891625616", "67", "38", "99", "0", "201", "1", "2", "68", "MCD6582391.1 BREX-1 system adenine-specific DNA-methyltransferase PglX [Desulfuromusa sp.]", "diamond", "396", "72.8", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfuromonadia", "Desulfuromonadales", "Geopsychrobacteraceae", "Desulfuromusa", "Desulfuromusa sp."], [29521191, "PRJNA994052_P_NODE_67650_length_215_cov_76.309859_g66394_i0", "PRJNA994052", "67650", "215", "76.309859", "164.06619685", "Desulfovibrionales bacterium", "2448050", "Bacteria", "Bacteria", "45.4", "0.00286", "", "NR", "MCG8529688.1", "2448050", "g66394", "i0", "43.1", "1.5906976744186", "58", "28", "75.3", "2", "5", "166", "419", "475", "MCG8529688.1 tyrosine-protein phosphatase [Desulfovibrionales bacterium]", "diamond", "342", "45.4", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfovibrionia", "Desulfovibrionales", null, null, "Desulfovibrionales bacterium"], [29773657, "PRJNA994052_P_NODE_30971_length_279_cov_29.427184_g29727_i0", "PRJNA994052", "30971", "279", "29.427184", "82.10184336", "Desulfomarina profundi", "2772557", "Bacteria", "Bacteria", "55.8", "1.14e-6", "", "NR", "WP_228855658.1", "2772557", "g29727", "i0", "42.7", "0.806451612903226", "75", "43", "80.6", "0", "271", "47", "183", "257", "WP_228855658.1 PKD domain-containing protein [Desulfomarina profundi]", "diamond", "225", "55.8", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfobulbia", "Desulfobulbales", "Desulfobulbaceae", "Desulfomarina", "Desulfomarina profundi"], [30285533, "PRJNA994052_P_NODE_83232_length_197_cov_25.000000_g81975_i0", "PRJNA994052", "83232", "197", "25", "49.25", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "78.6", "4.79e-15", "", "NR", "NMC48075.1", "885", "g81975", "i0", "61.4", "10.2944162436548", "57", "22", "86.8", "0", "176", "6", "123", "179", "NMC48075.1 efflux RND transporter permease subunit [Desulfovibrio sp.]", "diamond", "2028", "79", "0.994936708860759", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfovibrionia", "Desulfovibrionales", "Desulfovibrionaceae", "Desulfovibrio", "Desulfovibrio sp."], [32239679, "PRJNA994052_P_NODE_35698_length_268_cov_3.497436_g34452_i0", "PRJNA994052", "35698", "268", "3.497436", "9.37312848", "Desulfobacterales bacterium", "2044940", "Bacteria", "Bacteria", "124", "7.859999999999999e-31", "", "NR", "MBC8421200.1", "2044940", "g34452", "i0", "64.8", "10.9477611940299", "88", "31", "98.5", "0", "4", "267", "481", "568", "MBC8421200.1 BREX-1 system adenine-specific DNA-methyltransferase PglX [Desulfobacterales bacterium]", "diamond", "2934", "124", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfobacteria", "Desulfobacterales", null, null, "Desulfobacterales bacterium"]], "truncated": false, "filtered_table_rows_count": 8, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA994052", "p2": "Thermodesulfobacteriota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA994052&tax_phylum=Thermodesulfobacteriota", "results": [{"value": "PRJNA994052", "label": "PRJNA994052", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Thermodesulfobacteriota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA994052&tax_phylum=Thermodesulfobacteriota", "results": [{"value": "diamond", "label": "diamond", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA994052&tax_phylum=Thermodesulfobacteriota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA994052&tax_phylum=Thermodesulfobacteriota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA994052&tax_phylum=Thermodesulfobacteriota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA994052&tax_phylum=Thermodesulfobacteriota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA994052&tax_phylum=Thermodesulfobacteriota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA994052&tax_phylum=Thermodesulfobacteriota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA994052&tax_phylum=Thermodesulfobacteriota", "results": [{"value": "Thermodesulfobacteriota", "label": "Thermodesulfobacteriota", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA994052", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 235.1280300063081}